FFCP PHASE1:Hg19::chr1:170633245..170633256,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=-56bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | |association_with_transcript=-56bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | ||
|cluster_id=chr1:170633245..170633256,+ | |||
|coexpression_cluster_id=C851 | |coexpression_cluster_id=C851 | ||
|description=CAGE_peak_14_at_PRRX1_5end | |description=CAGE_peak_14_at_PRRX1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!8.69e-40!180;CL:0000057!2.77e-29!75;CL:0000680!1.54e-12!57;CL:0000056!1.54e-12!57;CL:0000355!1.54e-12!57;CL:0000187!1.84e-11!54;CL:0002620!2.86e-11!23;CL:0000183!5.88e-10!59;CL:0000393!5.60e-09!60;CL:0000211!5.60e-09!60;CL:0000359!8.98e-09!32;CL:0002334!1.80e-08!12;CL:0000048!8.06e-08!430;CL:0000192!8.94e-08!42;CL:0000514!8.94e-08!42;CL:0000723!3.86e-07!436;CL:0002539!5.25e-07!10 | |ontology_enrichment_celltype=CL:0000055!8.69e-40!180;CL:0000057!2.77e-29!75;CL:0000680!1.54e-12!57;CL:0000056!1.54e-12!57;CL:0000355!1.54e-12!57;CL:0000187!1.84e-11!54;CL:0002620!2.86e-11!23;CL:0000183!5.88e-10!59;CL:0000393!5.60e-09!60;CL:0000211!5.60e-09!60;CL:0000359!8.98e-09!32;CL:0002334!1.80e-08!12;CL:0000048!8.06e-08!430;CL:0000192!8.94e-08!42;CL:0000514!8.94e-08!42;CL:0000723!3.86e-07!436;CL:0002539!5.25e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000057;3.32e-13;73!CL:0002620;7.34e-13;23!CL:0002334;6.44e-11;12!CL:0002556;4.72e-09;6!CL:0002551;4.04e-08;6!CL:0002320;1.21e-07;188!CL:0002539;3.30e-07;10!CL:0002552;4.97e-07;5 | |ontology_enrichment_celltype_v019=CL:0000057;3.32e-13;73!CL:0002620;7.34e-13;23!CL:0002334;6.44e-11;12!CL:0002556;4.72e-09;6!CL:0002551;4.04e-08;6!CL:0002320;1.21e-07;188!CL:0002539;3.30e-07;10!CL:0002552;4.97e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.35e-32,76;CL:0000048,2.35e-13,427;CL:0002620,4.30e-13,23;CL:0000723,1.01e-12,433;CL:0000034,6.54e-12,441;CL:0002334,1.12e-10,12;CL:0002556,3.11e-09,6;CL:0002320,1.29e-08,361;CL:0002551,2.98e-08,6;CL:0000680,5.15e-08,58;CL:0000056,5.15e-08,58;CL:0000355,5.15e-08,58;CL:0000187,6.55e-08,55;CL:0000134,9.94e-08,354;CL:0002539,3.26e-07,10;CL:0002552,4.86e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.19e-22!83;UBERON:0002329!3.19e-22!83;UBERON:0003077!3.19e-22!83;UBERON:0003059!3.19e-22!83;UBERON:0007282!3.19e-22!83;UBERON:0009618!3.19e-22!83;UBERON:0007285!3.19e-22!83;UBERON:0004290!5.17e-18!70;UBERON:0003102!1.00e-14!95;UBERON:0000486!2.14e-14!82;UBERON:0001134!8.77e-14!61;UBERON:0002036!8.77e-14!61;UBERON:0003082!8.77e-14!61;UBERON:0002385!1.43e-13!63;UBERON:0001015!1.43e-13!63;UBERON:0000383!1.43e-13!63;UBERON:0000475!1.97e-11!365;UBERON:0000948!5.07e-10!24;UBERON:0005498!5.07e-10!24;UBERON:0004140!5.07e-10!24;UBERON:0009881!5.07e-10!24;UBERON:0004141!5.07e-10!24;UBERON:0003084!5.07e-10!24;UBERON:0007005!5.07e-10!24;UBERON:0004139!5.07e-10!24;UBERON:0004291!5.07e-10!24;UBERON:0007100!6.15e-10!27;UBERON:0002199!2.73e-09!45;UBERON:0002416!2.73e-09!45;UBERON:0004872!2.74e-09!84;UBERON:0005256!4.83e-09!143;UBERON:0000479!9.35e-09!787;UBERON:0002097!6.01e-08!40;UBERON:0001637!2.63e-07!42;UBERON:0003509!2.63e-07!42;UBERON:0004572!2.63e-07!42;UBERON:0000468!3.74e-07!659;UBERON:0004237!5.25e-07!10;UBERON:0004695!5.25e-07!10;UBERON:0002111!5.25e-07!10;UBERON:0004178!5.25e-07!10;UBERON:0001013!8.06e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!3.19e-22!83;UBERON:0002329!3.19e-22!83;UBERON:0003077!3.19e-22!83;UBERON:0003059!3.19e-22!83;UBERON:0007282!3.19e-22!83;UBERON:0009618!3.19e-22!83;UBERON:0007285!3.19e-22!83;UBERON:0004290!5.17e-18!70;UBERON:0003102!1.00e-14!95;UBERON:0000486!2.14e-14!82;UBERON:0001134!8.77e-14!61;UBERON:0002036!8.77e-14!61;UBERON:0003082!8.77e-14!61;UBERON:0002385!1.43e-13!63;UBERON:0001015!1.43e-13!63;UBERON:0000383!1.43e-13!63;UBERON:0000475!1.97e-11!365;UBERON:0000948!5.07e-10!24;UBERON:0005498!5.07e-10!24;UBERON:0004140!5.07e-10!24;UBERON:0009881!5.07e-10!24;UBERON:0004141!5.07e-10!24;UBERON:0003084!5.07e-10!24;UBERON:0007005!5.07e-10!24;UBERON:0004139!5.07e-10!24;UBERON:0004291!5.07e-10!24;UBERON:0007100!6.15e-10!27;UBERON:0002199!2.73e-09!45;UBERON:0002416!2.73e-09!45;UBERON:0004872!2.74e-09!84;UBERON:0005256!4.83e-09!143;UBERON:0000479!9.35e-09!787;UBERON:0002097!6.01e-08!40;UBERON:0001637!2.63e-07!42;UBERON:0003509!2.63e-07!42;UBERON:0004572!2.63e-07!42;UBERON:0000468!3.74e-07!659;UBERON:0004237!5.25e-07!10;UBERON:0004695!5.25e-07!10;UBERON:0002111!5.25e-07!10;UBERON:0004178!5.25e-07!10;UBERON:0001013!8.06e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.89e-10;31!UBERON:0001015;7.89e-10;31!UBERON:0000383;7.89e-10;31!UBERON:0002204;1.07e-09;70!UBERON:0002384;3.00e-09;198!UBERON:0001758;4.72e-09;6!UBERON:0003672;4.72e-09;6!UBERON:0002067;1.06e-08;9!UBERON:0002199;1.17e-08;46!UBERON:0002416;1.17e-08;46!UBERON:0002097;1.21e-08;41!UBERON:0000948;1.83e-08;22!UBERON:0000075;6.25e-08;16!UBERON:0001434;7.51e-08;36!UBERON:0003102;1.13e-07;50!UBERON:0001013;1.34e-07;14!UBERON:0003129;1.44e-07;7!UBERON:0001134;1.98e-07;16!UBERON:0002036;1.98e-07;16!UBERON:0004237;3.30e-07;10!UBERON:0004695;3.30e-07;10!UBERON:0002111;3.30e-07;10!UBERON:0004178;3.30e-07;10!UBERON:0007100;5.44e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002385;7.89e-10;31!UBERON:0001015;7.89e-10;31!UBERON:0000383;7.89e-10;31!UBERON:0002204;1.07e-09;70!UBERON:0002384;3.00e-09;198!UBERON:0001758;4.72e-09;6!UBERON:0003672;4.72e-09;6!UBERON:0002067;1.06e-08;9!UBERON:0002199;1.17e-08;46!UBERON:0002416;1.17e-08;46!UBERON:0002097;1.21e-08;41!UBERON:0000948;1.83e-08;22!UBERON:0000075;6.25e-08;16!UBERON:0001434;7.51e-08;36!UBERON:0003102;1.13e-07;50!UBERON:0001013;1.34e-07;14!UBERON:0003129;1.44e-07;7!UBERON:0001134;1.98e-07;16!UBERON:0002036;1.98e-07;16!UBERON:0004237;3.30e-07;10!UBERON:0004695;3.30e-07;10!UBERON:0002111;3.30e-07;10!UBERON:0004178;3.30e-07;10!UBERON:0007100;5.44e-07;25 | ||
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| ||
|short_description=p14@PRRX1 | |short_description=p14@PRRX1 | ||
}} | }} |
Latest revision as of 14:22, 18 September 2015
Short description: | p14@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | -56bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.35e-32 | 76 |
multi fate stem cell | 2.35e-13 | 427 |
skin fibroblast | 4.30e-13 | 23 |
somatic stem cell | 1.01e-12 | 433 |
stem cell | 6.54e-12 | 441 |
preadipocyte | 1.12e-10 | 12 |
fibroblast of periodontium | 3.11e-09 | 6 |
connective tissue cell | 1.29e-08 | 361 |
fibroblast of dermis | 2.98e-08 | 6 |
muscle precursor cell | 5.15e-08 | 58 |
myoblast | 5.15e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.15e-08 | 58 |
muscle cell | 6.55e-08 | 55 |
mesenchymal cell | 9.94e-08 | 354 |
aortic smooth muscle cell | 3.26e-07 | 10 |
fibroblast of gingiva | 4.86e-07 | 5 |