FFCP PHASE1:Hg19::chr19:45323615..45323627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4059 | |EntrezGene=4059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6722 | |HGNC=6722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-370bp_to_BC128254_5end | |association_with_transcript=-370bp_to_BC128254_5end | ||
|cluster_id=chr19:45323615..45323627,+ | |||
|coexpression_cluster_id=C924 | |coexpression_cluster_id=C924 | ||
|description=CAGE_peak_4_at_BCAM_5end | |description=CAGE_peak_4_at_BCAM_5end | ||
|id=chr19:45323615..45323627,+ | |id=chr19:45323615..45323627,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.27e-28!254;CL:0000223!1.31e-13!59;CL:0002076!5.24e-09!43;CL:0000076!2.35e-08!62;CL:0000077!1.32e-07!19 | |ontology_enrichment_celltype=CL:0000066!5.27e-28!254;CL:0000223!1.31e-13!59;CL:0002076!5.24e-09!43;CL:0000076!2.35e-08!62;CL:0000077!1.32e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002231;4.76e-11;3!CL:0000313;3.30e-09;1!CL:0002336;1.05e-08;1!CL:0002261;1.05e-08;1!CL:0002170;1.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.48e-13,58;CL:0000066,8.12e-13,253;CL:0002231,4.66e-11,3;CL:0000313,3.31e-09,1;CL:0002336,7.75e-09,1;CL:0002261,7.75e-09,1;CL:0002170,7.75e-09,1;CL:0002076,5.30e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.01e-08;30!CL:0000223;2.31e-07;58 | |||
|ontology_enrichment_disease=DOID:305!5.25e-29!106;DOID:0050687!1.49e-28!143;DOID:162!7.45e-20!235;DOID:14566!9.55e-19!239;DOID:7!1.07e-11!39;DOID:299!3.57e-08!25 | |ontology_enrichment_disease=DOID:305!5.25e-29!106;DOID:0050687!1.49e-28!143;DOID:162!7.45e-20!235;DOID:14566!9.55e-19!239;DOID:7!1.07e-11!39;DOID:299!3.57e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:7;7.83e-11;39!DOID:2152;3.30e-09;1!DOID:1749;7.92e-09;14!DOID:1799;1.05e-08;1!DOID:10165;1.05e-08;1!DOID:1798;1.05e-08;1!DOID:5093;2.67e-08;4!DOID:1612;2.67e-08;4!DOID:305;9.47e-08;106!DOID:299;2.74e-07;25!DOID:4362;8.40e-07;5!DOID:120;9.86e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.73e-22,106;DOID:0050687,3.12e-15,143;DOID:7,3.43e-14,39;DOID:162,4.73e-10,235;DOID:14566,9.22e-10,239;DOID:2152,3.31e-09,1;DOID:1749,6.20e-09,14;DOID:5093,1.65e-08,4;DOID:1612,1.65e-08,4;DOID:1799,2.06e-08,1;DOID:10165,2.06e-08,1;DOID:1798,2.06e-08,1;DOID:299,2.29e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.87e-16!82;UBERON:0003929!3.26e-13!54;UBERON:0004119!1.21e-11!169;UBERON:0000925!1.21e-11!169;UBERON:0006595!1.21e-11!169;UBERON:0001007!1.01e-10!155;UBERON:0001555!1.01e-10!155;UBERON:0007026!1.01e-10!155;UBERON:0002530!1.67e-09!59;UBERON:0004921!8.91e-09!129;UBERON:0004185!8.91e-09!129;UBERON:0005177!1.40e-07!107;UBERON:0000949!2.16e-07!45;UBERON:0005157!3.34e-07!51;UBERON:0005172!3.51e-07!55;UBERON:0005173!3.51e-07!55;UBERON:0005153!4.75e-07!37;UBERON:0000077!6.35e-07!130;UBERON:0005156!6.43e-07!59;UBERON:0000990!6.43e-07!59 | |ontology_enrichment_uberon=UBERON:0005911!1.87e-16!82;UBERON:0003929!3.26e-13!54;UBERON:0004119!1.21e-11!169;UBERON:0000925!1.21e-11!169;UBERON:0006595!1.21e-11!169;UBERON:0001007!1.01e-10!155;UBERON:0001555!1.01e-10!155;UBERON:0007026!1.01e-10!155;UBERON:0002530!1.67e-09!59;UBERON:0004921!8.91e-09!129;UBERON:0004185!8.91e-09!129;UBERON:0005177!1.40e-07!107;UBERON:0000949!2.16e-07!45;UBERON:0005157!3.34e-07!51;UBERON:0005172!3.51e-07!55;UBERON:0005173!3.51e-07!55;UBERON:0005153!4.75e-07!37;UBERON:0000077!6.35e-07!130;UBERON:0005156!6.43e-07!59;UBERON:0000990!6.43e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;3.30e-09;1!UBERON:0000997;1.05e-08;1!UBERON:0002171;1.05e-08;1!UBERON:0005056;1.05e-08;1!UBERON:0006518;1.05e-08;1!UBERON:0008949;1.05e-08;1!UBERON:0004176;1.05e-08;1!UBERON:0000101;1.05e-08;1!UBERON:0002167;1.05e-08;1!UBERON:0003343;1.05e-08;4!UBERON:0004785;1.05e-08;4!UBERON:0003134;1.06e-07;33!UBERON:0005156;1.19e-07;59!UBERON:0000990;1.19e-07;59!UBERON:0003100;4.01e-07;41!UBERON:0000995;4.15e-07;17!UBERON:0003133;4.49e-07;44!UBERON:0000474;4.87e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.31e-09,1;UBERON:0005156,8.66e-09,59;UBERON:0000990,8.66e-09,59;UBERON:0003343,9.75e-09,4;UBERON:0004785,9.75e-09,4;UBERON:0000997,1.05e-08,1;UBERON:0005056,1.05e-08,1;UBERON:0002171,1.32e-08,1;UBERON:0006518,1.32e-08,1;UBERON:0008949,1.32e-08,1;UBERON:0000101,1.32e-08,1;UBERON:0002167,1.32e-08,1;UBERON:0003100,5.38e-08,41;UBERON:0003133,9.91e-07,48;UBERON:0005153,9.97e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0.286804595389004,0.243947412259191,0,0.232387885739037,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.860919069801795,0.171567810298526,0.658501712451753,0,0.402115889646523,1.48141512253647,0,0,0,0.115930404975077,0,0,0,0.190254152234598,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,1.16253575405585,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,2.29632954224082,1.40354529212299,0.828728900423067,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0.877039506583738,0.522870902049801,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0.384380134730212,0.638063562472921,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,1.92495971052672,0.490080431962063,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0.844501632511974,0.19924798825107,0,1.0077309914171,0.102268682502155,0,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0.524759999977174,0,1.93448862085349,0.254253650292766,2.36387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,1.39423744278603,0.0769502585037971,0.113942055847001,0.922255617552241,0.628303510868405,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.424059214301822,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0.313932918407225,0,1.13843818411917,0.138674673013139,1.90915712168644,1.37189356380129,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.782205530939212,0.0801588202515337,0,0,0.144090417154106,0,0.343189995723929,0.14405479798815,0.248505071130865,0.471388069233591,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0.798716001995964,0.858452096273142,0,0.0671834724867263,0,1.16495949527454,0.945398187686684,1.15382201733633,0.943649613958588,1.57483970423598,0,0,0.136203406111576,0.160753148465019,0.412618309791701,0,0,0,0,0.335434687599266,0.0788057072991982,0.314727528809989,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0.628216385000937,0.886068179966986,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0.782982875895635,1.36023555307363,0.231522474323834,0.489473409012935,0,0.617602894321944,0.657852148736121,0.353378291891762,0.192914038270915,0.337884881306145,0,0.345430341731199,0.607719912354764,0.276516872303462,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.196295437002051,0,2.38457178078183,2.65709032145778,0,0,0,0.0752103283492573,0,0.781514011233092,1.04762677792569,0.49131575253029,0.295712172434091,0,0,0.206686796501184,0,0,0,0.496211178389294,0.175871244359621,0.511049710558381,0,0,0,0,0,0,0,0,0,0.945550727071746,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0.215927591218621,1.43325506366115,0,0.158013611732727,0.116241425368125,0.347716544605159,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,3.02009665854039,0.098150233615243,0.365753774946808,0,0,0,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| ||
|short_description=p4@BCAM | |short_description=p4@BCAM | ||
}} | }} |
Latest revision as of 14:22, 18 September 2015
Short description: | p4@BCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCAM_5end |
Coexpression cluster: | C924_oral_cervical_smallcell_serous_Keratinocyte_Prostate_epidermoid |
Association with transcript: | -370bp_to_BC128254_5end |
EntrezGene: | BCAM |
HGNC: | 6722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.48e-13 | 58 |
epithelial cell | 8.12e-13 | 253 |
epithelial cell of prostate | 4.66e-11 | 3 |
serous secreting cell | 3.31e-09 | 1 |
buccal mucosa cell | 7.75e-09 | 1 |
endothelial cell of viscerocranial mucosa | 7.75e-09 | 1 |
keratinized cell of the oral mucosa | 7.75e-09 | 1 |
endo-epithelial cell | 5.30e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.31e-09 | 1 |
reproductive structure | 8.66e-09 | 59 |
reproductive system | 8.66e-09 | 59 |
mucosa of oral region | 9.75e-09 | 4 |
respiratory system mucosa | 9.75e-09 | 4 |
mammalian vulva | 1.05e-08 | 1 |
external female genitalia | 1.05e-08 | 1 |
lower lobe of right lung | 1.32e-08 | 1 |
right lung lobe | 1.32e-08 | 1 |
lower lobe of lung | 1.32e-08 | 1 |
lobe of lung | 1.32e-08 | 1 |
right lung | 1.32e-08 | 1 |
female organism | 5.38e-08 | 41 |
reproductive organ | 9.91e-07 | 48 |
epithelial bud | 9.97e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.73e-22 | 106 |
cell type cancer | 3.12e-15 | 143 |
disease of anatomical entity | 3.43e-14 | 39 |
cancer | 4.73e-10 | 235 |
disease of cellular proliferation | 9.22e-10 | 239 |
ovary epithelial cancer | 3.31e-09 | 1 |
squamous cell carcinoma | 6.20e-09 | 14 |
thoracic cancer | 1.65e-08 | 4 |
breast cancer | 1.65e-08 | 4 |
islet cell tumor | 2.06e-08 | 1 |
endocrine pancreas cancer | 2.06e-08 | 1 |
pancreatic endocrine carcinoma | 2.06e-08 | 1 |
adenocarcinoma | 2.29e-07 | 25 |