FFCP PHASE1:Hg19::chr1:170633058..170633084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2N3 | |UniProt=G3V2N3 | ||
|association_with_transcript=0bp_to_ENST00000497230_5end | |association_with_transcript=0bp_to_ENST00000497230_5end | ||
|cluster_id=chr1:170633058..170633084,+ | |||
|description=CAGE_peak_5_at_PRRX1_5end | |description=CAGE_peak_5_at_PRRX1_5end | ||
|id=chr1:170633058..170633084,+ | |id=chr1:170633058..170633084,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.24e-40!180;CL:0000057!1.05e-23!75;CL:0000680!3.51e-18!57;CL:0000056!3.51e-18!57;CL:0000355!3.51e-18!57;CL:0000187!6.04e-17!54;CL:0000183!1.59e-15!59;CL:0000192!3.56e-14!42;CL:0000514!3.56e-14!42;CL:0000393!5.72e-14!60;CL:0000211!5.72e-14!60;CL:0000359!1.94e-13!32;CL:0002620!5.18e-11!23;CL:0002334!3.30e-07!12;CL:0000048!3.45e-07!430;CL:0002539!4.16e-07!10 | |ontology_enrichment_celltype=CL:0000055!9.24e-40!180;CL:0000057!1.05e-23!75;CL:0000680!3.51e-18!57;CL:0000056!3.51e-18!57;CL:0000355!3.51e-18!57;CL:0000187!6.04e-17!54;CL:0000183!1.59e-15!59;CL:0000192!3.56e-14!42;CL:0000514!3.56e-14!42;CL:0000393!5.72e-14!60;CL:0000211!5.72e-14!60;CL:0000359!1.94e-13!32;CL:0002620!5.18e-11!23;CL:0002334!3.30e-07!12;CL:0000048!3.45e-07!430;CL:0002539!4.16e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.22e-14;32!CL:0002620;2.66e-13;23!CL:0000057;2.62e-10;73!CL:0000192;1.99e-09;43!CL:0002334;1.14e-08;12!CL:0002539;2.39e-08;10!CL:0000187;4.53e-08;55!CL:0002320;4.58e-07;188!CL:0000393;7.62e-07;61!CL:0000211;7.62e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;5.22e-14;32!CL:0002620;2.66e-13;23!CL:0000057;2.62e-10;73!CL:0000192;1.99e-09;43!CL:0002334;1.14e-08;12!CL:0002539;2.39e-08;10!CL:0000187;4.53e-08;55!CL:0002320;4.58e-07;188!CL:0000393;7.62e-07;61!CL:0000211;7.62e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.85e-26,76;CL:0000680,1.22e-15,58;CL:0000056,1.22e-15,58;CL:0000355,1.22e-15,58;CL:0000359,1.38e-14,32;CL:0000187,3.01e-14,55;CL:0002620,2.72e-13,23;CL:0000192,4.93e-12,43;CL:0000514,4.93e-12,43;CL:0000393,1.59e-11,61;CL:0000211,1.59e-11,61;CL:0000048,6.19e-11,427;CL:0000723,3.40e-10,433;CL:0000034,2.93e-09,441;CL:0002334,1.16e-08,12;CL:0002539,2.41e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.99e-09;43!CL:0000355;6.31e-09;58 | |ontology_enrichment_development_v019=CL:0000514;1.99e-09;43!CL:0000355;6.31e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002385;1.14e-11;31!UBERON:0001015;1.14e-11;31!UBERON:0000383;1.14e-11;31!UBERON:0004573;7.19e-11;33!UBERON:0004571;7.19e-11;33!UBERON:0002204;2.12e-09;70!UBERON:0007100;2.36e-09;25!UBERON:0000948;7.40e-09;22!UBERON:0001637;1.00e-08;42!UBERON:0003509;1.00e-08;42!UBERON:0004572;1.00e-08;42!UBERON:0002384;1.18e-08;198!UBERON:0004237;2.39e-08;10!UBERON:0004695;2.39e-08;10!UBERON:0002111;2.39e-08;10!UBERON:0004178;2.39e-08;10!UBERON:0001134;2.84e-08;16!UBERON:0002036;2.84e-08;16!UBERON:0002199;4.09e-08;46!UBERON:0002416;4.09e-08;46!UBERON:0002097;6.83e-08;41!UBERON:0000947;3.83e-07;21!UBERON:0010191;3.83e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0002385;1.14e-11;31!UBERON:0001015;1.14e-11;31!UBERON:0000383;1.14e-11;31!UBERON:0004573;7.19e-11;33!UBERON:0004571;7.19e-11;33!UBERON:0002204;2.12e-09;70!UBERON:0007100;2.36e-09;25!UBERON:0000948;7.40e-09;22!UBERON:0001637;1.00e-08;42!UBERON:0003509;1.00e-08;42!UBERON:0004572;1.00e-08;42!UBERON:0002384;1.18e-08;198!UBERON:0004237;2.39e-08;10!UBERON:0004695;2.39e-08;10!UBERON:0002111;2.39e-08;10!UBERON:0004178;2.39e-08;10!UBERON:0001134;2.84e-08;16!UBERON:0002036;2.84e-08;16!UBERON:0002199;4.09e-08;46!UBERON:0002416;4.09e-08;46!UBERON:0002097;6.83e-08;41!UBERON:0000947;3.83e-07;21!UBERON:0010191;3.83e-07;21 | ||
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| ||
|short_description=p5@PRRX1 | |short_description=p5@PRRX1 | ||
}} | }} |
Latest revision as of 14:19, 18 September 2015
Short description: | p5@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRRX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000497230_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | G3V2N3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.85e-26 | 76 |
muscle precursor cell | 1.22e-15 | 58 |
myoblast | 1.22e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-15 | 58 |
vascular associated smooth muscle cell | 1.38e-14 | 32 |
muscle cell | 3.01e-14 | 55 |
skin fibroblast | 2.72e-13 | 23 |
smooth muscle cell | 4.93e-12 | 43 |
smooth muscle myoblast | 4.93e-12 | 43 |
electrically responsive cell | 1.59e-11 | 61 |
electrically active cell | 1.59e-11 | 61 |
multi fate stem cell | 6.19e-11 | 427 |
somatic stem cell | 3.40e-10 | 433 |
stem cell | 2.93e-09 | 441 |
preadipocyte | 1.16e-08 | 12 |
aortic smooth muscle cell | 2.41e-08 | 10 |