FFCP PHASE1:Hg19::chr1:170632867..170632878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-168bp_to_ENST00000239461_5end | |association_with_transcript=-168bp_to_ENST00000239461_5end | ||
|cluster_id=chr1:170632867..170632878,+ | |||
|coexpression_cluster_id=C851 | |coexpression_cluster_id=C851 | ||
|description=CAGE_peak_21_at_PRRX1_5end | |description=CAGE_peak_21_at_PRRX1_5end | ||
|id=chr1:170632867..170632878,+ | |id=chr1:170632867..170632878,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.08e-32!180;CL:0000057!1.67e-20!75;CL:0000680!5.06e-13!57;CL:0000056!5.06e-13!57;CL:0000355!5.06e-13!57;CL:0000187!1.76e-12!54;CL:0000183!1.62e-11!59;CL:0002620!3.95e-11!23;CL:0000393!1.28e-10!60;CL:0000211!1.28e-10!60;CL:0000192!4.93e-09!42;CL:0000514!4.93e-09!42;CL:0002334!3.44e-08!12;CL:0000359!2.20e-07!32;CL:0002539!3.53e-07!10 | |ontology_enrichment_celltype=CL:0000055!7.08e-32!180;CL:0000057!1.67e-20!75;CL:0000680!5.06e-13!57;CL:0000056!5.06e-13!57;CL:0000355!5.06e-13!57;CL:0000187!1.76e-12!54;CL:0000183!1.62e-11!59;CL:0002620!3.95e-11!23;CL:0000393!1.28e-10!60;CL:0000211!1.28e-10!60;CL:0000192!4.93e-09!42;CL:0000514!4.93e-09!42;CL:0002334!3.44e-08!12;CL:0000359!2.20e-07!32;CL:0002539!3.53e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.56e-11;12!CL:0002620;1.27e-09;23!CL:0000153;9.66e-09;9!CL:0000447;9.66e-09;9!CL:0002570;9.37e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.89e-18,76;CL:0002334,1.28e-11,12;CL:0000048,1.69e-09,427;CL:0002620,2.10e-09,23;CL:0000723,4.50e-09,433;CL:0000153,8.10e-09,9;CL:0000447,8.10e-09,9;CL:0000034,1.59e-08,441;CL:0002570,5.34e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.20e-20!83;UBERON:0002329!9.20e-20!83;UBERON:0003077!9.20e-20!83;UBERON:0003059!9.20e-20!83;UBERON:0007282!9.20e-20!83;UBERON:0009618!9.20e-20!83;UBERON:0007285!9.20e-20!83;UBERON:0004290!1.32e-16!70;UBERON:0000486!8.44e-15!82;UBERON:0001134!4.73e-13!61;UBERON:0002036!4.73e-13!61;UBERON:0003082!4.73e-13!61;UBERON:0002385!8.58e-13!63;UBERON:0001015!8.58e-13!63;UBERON:0000383!8.58e-13!63;UBERON:0000475!2.04e-12!365;UBERON:0003102!8.18e-11!95;UBERON:0002199!1.72e-10!45;UBERON:0002416!1.72e-10!45;UBERON:0005256!5.73e-09!143;UBERON:0000468!5.82e-08!659;UBERON:0002097!1.17e-07!40;UBERON:0002100!1.39e-07!216;UBERON:0004573!1.54e-07!33;UBERON:0004571!1.54e-07!33;UBERON:0004237!3.53e-07!10;UBERON:0004695!3.53e-07!10;UBERON:0002111!3.53e-07!10;UBERON:0004178!3.53e-07!10;UBERON:0000479!3.77e-07!787;UBERON:0007023!4.37e-07!115;UBERON:0004872!6.24e-07!84;UBERON:0001135!7.87e-07!15 | |ontology_enrichment_uberon=UBERON:0000914!9.20e-20!83;UBERON:0002329!9.20e-20!83;UBERON:0003077!9.20e-20!83;UBERON:0003059!9.20e-20!83;UBERON:0007282!9.20e-20!83;UBERON:0009618!9.20e-20!83;UBERON:0007285!9.20e-20!83;UBERON:0004290!1.32e-16!70;UBERON:0000486!8.44e-15!82;UBERON:0001134!4.73e-13!61;UBERON:0002036!4.73e-13!61;UBERON:0003082!4.73e-13!61;UBERON:0002385!8.58e-13!63;UBERON:0001015!8.58e-13!63;UBERON:0000383!8.58e-13!63;UBERON:0000475!2.04e-12!365;UBERON:0003102!8.18e-11!95;UBERON:0002199!1.72e-10!45;UBERON:0002416!1.72e-10!45;UBERON:0005256!5.73e-09!143;UBERON:0000468!5.82e-08!659;UBERON:0002097!1.17e-07!40;UBERON:0002100!1.39e-07!216;UBERON:0004573!1.54e-07!33;UBERON:0004571!1.54e-07!33;UBERON:0004237!3.53e-07!10;UBERON:0004695!3.53e-07!10;UBERON:0002111!3.53e-07!10;UBERON:0004178!3.53e-07!10;UBERON:0000479!3.77e-07!787;UBERON:0007023!4.37e-07!115;UBERON:0004872!6.24e-07!84;UBERON:0001135!7.87e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.27e-11;14!UBERON:0002072;4.05e-09;5!UBERON:0002199;1.37e-08;46!UBERON:0002416;1.37e-08;46!UBERON:0003102;5.33e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,5.21e-12,46;UBERON:0002416,5.21e-12,46;UBERON:0001013,6.17e-11,14;UBERON:0003102,2.18e-09,99;UBERON:0007524,2.75e-09,73;UBERON:0002072,5.91e-09,5;UBERON:0000486,7.55e-09,83;UBERON:0002329,1.06e-08,71;UBERON:0003059,1.06e-08,71;UBERON:0007282,1.06e-08,71;UBERON:0004290,1.06e-08,71;UBERON:0009618,1.06e-08,71;UBERON:0003077,1.72e-08,72;UBERON:0007285,1.72e-08,72;UBERON:0002097,1.31e-07,41;UBERON:0007503,2.38e-07,78 | |||
|phase1_expression=2.18014055124668,1.07050261945492,0.845726424575827,1.0007329835313,0,0,2.53299878168311,1.26343974685366,1.30592814099919,0,0,0,0,0.495065411840187,0.331397375727916,0.672325146451775,3.01347264011988,1.46062018077475,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0.152826811495903,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.1686349143074,0,1.30361867064741,2.3858578411533,1.94653948121054,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.51956613997496,0.794455084879313,1.72101972449288,3.54668382198357,0.560677600142307,1.06748995729705,0.24666754841716,1.55605517699883,0.269421344139376,0.163461903113459,0,0,0,1.5608003841516,1.71141546463335,1.64393548606981,0.704606991862589,0.485618833104395,0.702254033511242,0.816616685019573,0.859840221182376,0.723280468230358,0,2.71993622206413,0,0,1.17835279767846,0.500474079487857,1.93944880838928,1.31693286264251,0.919463387397059,3.60571341375832,0.340296549480063,0.538168907066586,1.06778694409284,0.423863802319124,0,0.515262646192195,1.28820270022815,1.67505170698431,2.02531598689519,2.63079913935236,1.26216887122057,0.368199594569197,2.42469085228218,0.710019185033229,1.10827308050404,1.01736355386293,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,3.12899064659632,1.28648187638577,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,1.7601188597028,0.258543431515556,0,1.690605505112,1.32969058292435,1.04007436911366,0.771622122786426,0,1.5985330740966,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.958499421966331,0,1.42636905040718,1.44781306667579,0,1.07436577943937,0,0,0,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,1.71768088406796,0.500170521059677,0.271265023699736,1.45579603071565,1.60586089917446,1.26161932027148,1.99140405487612,1.80567659836631,0,1.03473071292505,2.65690239414175,0.553107505625109,1.30325421702124,0.195801157462741,0.343143423810856,0,0,0,0,0,0,3.2254015016441,2.14846762603287,1.40330047216537,0.256278298511402,3.58195074346692,0.482561763430822,0,2.46735510084249,2.48586415438378,3.12083192852475,2.07701771673448,1.97557643381931,0,0,0,0,1.45672934405374,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,1.6068392984416,1.35339005608971,0.616194468458578,0.460511024178389,0.827019434907183,0.751941714077915,0.580066775656914,0.596586391912706,2.31483292681517,0,0,0,0,1.85938219718914,0.62962469366128,1.3940745403212,1.23213432070436,1.59691809095107,0.869932992075073,1.48259375283136,0.286249773483982,0.372158369359667,0,0.38126038784765,0.255897791311334,0.42793898803392,2.86382923133343,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,1.01091240786658,0,0.842516912477962,0,0,0,1.50149902548784,0.282810863907425,0,2.2054613741845,0.66343897524122,0,1.15755106853338,0,0,0,0.845086807596724,0.143411352204052,0.0982490410131212,0.35667105148125,1.77380532035299,2.32218398827431,1.64647446479951,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0.738508832766417,1.86623752597084,0,0,0,0.394573622547734,0,2.22273980289274,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,1.77148277162768,0.241192877250816,0,0,0,0,0,0,2.5393585306253,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0.394584402849391,0,0.30607276163049,2.96976924253893,0,0.103688191397247,0,0,0,0,0,0.832048038078832,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,0.271808412147228,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,1.67569440763353,0.687481272035051,0.717873024576814,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,1.42939065274673,0,1.017074150619,1.62899880526114,0,0.653174720218818,0,0,0.681552087141687,0,0,0,0.517131825446202,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.554645257684261,0.248385611765534,0,0,0,0,0,0,0,1.49254802886874,1.63599316893057,2.21922344601045,0.947015026375446,1.0062716070103,0.889811221596536,0.457680136793847,0.907385542579434,1.08806040407946,0.73927574994817,0.63718706865481,1.34940933649081,0.310525913752519,0.4147062078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| ||
|short_description=p21@PRRX1 | |short_description=p21@PRRX1 | ||
}} | }} |
Latest revision as of 14:17, 18 September 2015
Short description: | p21@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | -168bp_to_ENST00000239461_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.89e-18 | 76 |
preadipocyte | 1.28e-11 | 12 |
multi fate stem cell | 1.69e-09 | 427 |
skin fibroblast | 2.10e-09 | 23 |
somatic stem cell | 4.50e-09 | 433 |
GAG secreting cell | 8.10e-09 | 9 |
carbohydrate secreting cell | 8.10e-09 | 9 |
stem cell | 1.59e-08 | 441 |
mesenchymal stem cell of adipose | 5.34e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
integument | 5.21e-12 | 46 |
integumental system | 5.21e-12 | 46 |
adipose tissue | 6.17e-11 | 14 |
surface structure | 2.18e-09 | 99 |
dense mesenchyme tissue | 2.75e-09 | 73 |
hypodermis | 5.91e-09 | 5 |
multilaminar epithelium | 7.55e-09 | 83 |
somite | 1.06e-08 | 71 |
presomitic mesoderm | 1.06e-08 | 71 |
presumptive segmental plate | 1.06e-08 | 71 |
dermomyotome | 1.06e-08 | 71 |
trunk paraxial mesoderm | 1.06e-08 | 71 |
paraxial mesoderm | 1.72e-08 | 72 |
presumptive paraxial mesoderm | 1.72e-08 | 72 |
skin of body | 1.31e-07 | 41 |
epithelial vesicle | 2.38e-07 | 78 |