FFCP PHASE1:Hg19::chr2:80531724..80531740,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:80531724..80531740,- to FFCP PHASE1:Hg19::chr2:80531724..80531740,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=347730 | |EntrezGene=347730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19408 | |HGNC=19408 | ||
|TSSclassifier=strong | |||
|UniProt=C9JEE2 | |UniProt=C9JEE2 | ||
|association_with_transcript=-4bp_to_ENST00000416268_5end | |||
|cluster_id=chr2:80531724..80531740,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_LRRTM1_5end | |||
|id=chr2:80531724..80531740,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.67e-11;1!UBERON:0006601;4.42e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-51!57;UBERON:0005068!2.43e-51!57;UBERON:0006241!2.43e-51!57;UBERON:0007135!2.43e-51!57;UBERON:0002780!1.19e-50!41;UBERON:0001890!1.19e-50!41;UBERON:0006240!1.19e-50!41;UBERON:0001893!8.76e-50!34;UBERON:0003080!2.84e-49!42;UBERON:0001869!3.12e-49!32;UBERON:0002791!2.63e-47!33;UBERON:0002020!7.46e-46!34;UBERON:0003528!7.46e-46!34;UBERON:0002616!2.29e-43!59;UBERON:0001017!1.39e-41!82;UBERON:0005743!1.52e-41!86;UBERON:0002619!3.39e-41!22;UBERON:0007023!3.14e-40!115;UBERON:0000955!1.22e-37!69;UBERON:0006238!1.22e-37!69;UBERON:0000073!1.18e-36!94;UBERON:0001016!1.18e-36!94;UBERON:0001950!5.99e-36!20;UBERON:0000956!8.31e-36!25;UBERON:0000203!8.31e-36!25;UBERON:0003075!2.97e-35!86;UBERON:0007284!2.97e-35!86;UBERON:0003056!4.84e-34!61;UBERON:0002346!3.02e-33!90;UBERON:0000033!1.65e-24!123;UBERON:0000153!2.51e-24!129;UBERON:0007811!2.51e-24!129;UBERON:0004121!1.36e-20!169;UBERON:0000924!7.31e-20!173;UBERON:0006601!7.31e-20!173;UBERON:0001871!6.40e-17!7;UBERON:0000200!8.20e-17!6;UBERON:0002420!1.93e-15!9;UBERON:0007245!1.93e-15!9;UBERON:0010009!1.93e-15!9;UBERON:0010011!1.93e-15!9;UBERON:0000454!1.93e-15!9;UBERON:0000349!4.14e-15!5;UBERON:0000369!9.14e-13!4;UBERON:0002435!9.14e-13!4;UBERON:0000204!9.14e-13!4;UBERON:0010082!9.14e-13!4;UBERON:0000025!1.02e-12!194;UBERON:0002308!2.26e-11!9;UBERON:0000125!2.26e-11!9;UBERON:0009663!1.23e-10!7;UBERON:0004111!1.56e-10!241;UBERON:0005383!6.70e-10!3;UBERON:0005382!6.70e-10!3;UBERON:0002021!8.23e-10!5;UBERON:0002771!6.40e-09!3;UBERON:0000064!9.43e-09!219;UBERON:0000477!6.41e-08!286;UBERON:0000062!1.47e-07!511;UBERON:0000475!2.32e-07!365;UBERON:0000481!2.82e-07!347;UBERON:0001954!4.29e-07!2;UBERON:0003022!4.29e-07!2;UBERON:0002421!4.29e-07!2;UBERON:0002600!4.29e-07!2;UBERON:0001873!4.97e-07!2;UBERON:0010122!4.97e-07!2;UBERON:0001870!8.10e-07!2;UBERON:0001876!8.10e-07!2;UBERON:0000922!9.31e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;3.63e-38;32!UBERON:0001869;4.56e-38;32!UBERON:0003528;2.90e-34;34!UBERON:0002020;2.90e-34;34!UBERON:0002619;8.12e-34;22!UBERON:0001893;6.61e-33;34!UBERON:0000956;8.58e-30;25!UBERON:0000203;8.58e-30;25!UBERON:0000369;1.37e-23;4!UBERON:0002435;1.37e-23;4!UBERON:0000204;1.37e-23;4!UBERON:0001950;1.34e-22;20!UBERON:0002780;3.14e-22;41!UBERON:0001890;3.14e-22;41!UBERON:0001954;7.76e-21;2!UBERON:0003022;7.76e-21;2!UBERON:0002421;7.76e-21;2!UBERON:0002600;7.76e-21;2!UBERON:0000349;9.65e-19;5!UBERON:0002021;1.76e-18;5!UBERON:0005383;1.61e-14;3!UBERON:0005382;1.61e-14;3!UBERON:0009663;9.51e-14;7!UBERON:0000073;2.81e-13;53!UBERON:0002616;2.81e-13;53!UBERON:0001882;9.55e-12;1!UBERON:0001874;9.55e-12;1!UBERON:0005403;9.55e-12;1!UBERON:0002581;2.67e-11;1!UBERON:0002902;2.67e-11;1!UBERON:0002022;2.67e-11;1!UBERON:0003112;2.67e-11;1!UBERON:0001736;2.67e-11;1!UBERON:0011158;2.67e-11;1!UBERON:0009899;2.67e-11;1!UBERON:0003128;2.67e-11;1!UBERON:0001703;2.67e-11;1!UBERON:0002241;2.67e-11;1!UBERON:0002420;8.15e-11;9!UBERON:0000125;8.15e-11;9!UBERON:0007245;8.15e-11;9!UBERON:0002308;8.15e-11;9!UBERON:0010009;8.15e-11;9!UBERON:0010011;8.15e-11;9!UBERON:0000454;8.15e-11;9!UBERON:0000955;3.69e-10;68!UBERON:0001017;1.29e-09;75!UBERON:0000200;1.47e-07;6!UBERON:0001044;1.47e-07;6!UBERON:0003293;1.47e-07;6!UBERON:0003294;1.47e-07;6!UBERON:0010047;1.47e-07;6!UBERON:0003408;1.47e-07;6!UBERON:0000167;1.47e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,6.49e-42,32;UBERON:0001869,6.49e-42,32;UBERON:0003528,2.01e-39,34;UBERON:0002020,2.01e-39,34;UBERON:0001893,2.01e-39,34;UBERON:0002619,7.01e-34,22;UBERON:0002780,1.43e-32,41;UBERON:0001890,1.43e-32,41;UBERON:0003080,1.43e-32,41;UBERON:0006240,1.43e-32,41;UBERON:0000956,7.53e-30,25;UBERON:0000203,7.53e-30,25;UBERON:0000073,5.97e-25,53;UBERON:0002616,5.97e-25,53;UBERON:0000369,9.38e-24,4;UBERON:0002435,9.38e-24,4;UBERON:0000204,9.38e-24,4;UBERON:0010082,9.38e-24,4;UBERON:0001049,1.52e-23,56;UBERON:0005068,1.52e-23,56;UBERON:0006241,1.52e-23,56;UBERON:0007135,1.52e-23,56;UBERON:0001950,1.00e-22,20;UBERON:0003056,1.67e-21,61;UBERON:0001954,1.29e-20,2;UBERON:0003022,1.29e-20,2;UBERON:0002421,1.29e-20,2;UBERON:0002600,1.29e-20,2;UBERON:0000955,7.66e-19,68;UBERON:0006238,7.66e-19,68;UBERON:0002021,1.09e-18,5;UBERON:0000349,1.31e-18,5;UBERON:0001017,1.98e-18,81;UBERON:0007023,1.57e-17,114;UBERON:0001016,1.97e-16,89;UBERON:0003075,1.31e-15,82;UBERON:0007284,1.31e-15,82;UBERON:0002346,8.31e-15,86;UBERON:0005383,1.15e-14,3;UBERON:0005382,1.15e-14,3;UBERON:0009663,7.68e-14,7;UBERON:0010371,5.93e-12,104;UBERON:0001882,9.57e-12,1;UBERON:0005403,9.57e-12,1;UBERON:0001874,1.06e-11,1;UBERON:0011216,1.09e-11,223;UBERON:0002902,1.18e-11,1;UBERON:0009899,1.18e-11,1;UBERON:0001736,1.31e-11,1;UBERON:0006298,1.31e-11,1;UBERON:0002022,1.60e-11,1;UBERON:0002581,2.68e-11,1;UBERON:0003112,4.91e-11,1;UBERON:0011158,4.91e-11,1;UBERON:0003128,4.91e-11,1;UBERON:0001703,4.91e-11,1;UBERON:0002241,4.91e-11,1;UBERON:0004761,4.91e-11,1;UBERON:0009617,4.91e-11,1;UBERON:0002420,6.91e-11,9;UBERON:0000125,6.91e-11,9;UBERON:0007245,6.91e-11,9;UBERON:0002308,6.91e-11,9;UBERON:0010009,6.91e-11,9;UBERON:0010011,6.91e-11,9;UBERON:0000454,6.91e-11,9;UBERON:0010314,1.01e-10,132;UBERON:0004121,1.09e-10,171;UBERON:0000924,1.09e-10,171;UBERON:0006601,1.09e-10,171;UBERON:0001044,1.02e-07,6;UBERON:0003293,1.02e-07,6;UBERON:0003294,1.02e-07,6;UBERON:0010047,1.02e-07,6;UBERON:0000167,1.02e-07,6;UBERON:0000200,1.74e-07,6;UBERON:0004111,4.74e-07,240;UBERON:0000025,9.15e-07,192 | |||
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| ||
|short_description=p3@LRRTM1 | |||
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Latest revision as of 14:13, 18 September 2015
Short description: | p3@LRRTM1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRTM1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -4bp_to_ENST00000416268_5end |
EntrezGene: | LRRTM1 |
HGNC: | 19408 |
UniProt: | C9JEE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data