FFCP PHASE1:Hg19::chr1:170632439..170632465,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=164bp_to_ENST00000367760_5end | |association_with_transcript=164bp_to_ENST00000367760_5end | ||
|cluster_id=chr1:170632439..170632465,+ | |||
|description=CAGE_peak_11_at_PRRX1_5end | |description=CAGE_peak_11_at_PRRX1_5end | ||
|id=chr1:170632439..170632465,+ | |id=chr1:170632439..170632465,+ | ||
|ontology_enrichment_celltype=CL:0002620;3.80e-13;23!CL:0000057;1.33e-09;73!CL:0002570;8.04e-09;8!CL:0000359;1.04e-08;32!CL:0002556;3.27e-08;6!CL:0002334;1.71e-07;12!CL:0002551;1.84e-07;6!CL:0000153;7.98e-07;9!CL:0000447;7.98e-07;9 | |ontology_enrichment_celltype=CL:0000055!1.82e-37!180;CL:0000057!1.14e-22!75;CL:0002620!5.25e-12!23;CL:0000680!1.05e-11!57;CL:0000056!1.05e-11!57;CL:0000355!1.05e-11!57;CL:0000187!1.21e-10!54;CL:0000393!2.08e-10!60;CL:0000211!2.08e-10!60;CL:0000183!4.54e-09!59;CL:0000359!9.18e-09!32;CL:0000192!1.95e-07!42;CL:0000514!1.95e-07!42 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;3.80e-13;23!CL:0000057;1.33e-09;73!CL:0002570;8.04e-09;8!CL:0000359;1.04e-08;32!CL:0002556;3.27e-08;6!CL:0002334;1.71e-07;12!CL:0002551;1.84e-07;6!CL:0000153;7.98e-07;9!CL:0000447;7.98e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.30e-23,76;CL:0000048,2.82e-15,427;CL:0000723,1.48e-14,433;CL:0000034,1.24e-13,441;CL:0002620,4.11e-13,23;CL:0000680,1.74e-09,58;CL:0000056,1.74e-09,58;CL:0000355,1.74e-09,58;CL:0000359,3.68e-09,32;CL:0002570,7.32e-09,8;CL:0000187,7.94e-09,55;CL:0000393,9.02e-09,61;CL:0000211,9.02e-09,61;CL:0002556,3.29e-08,6;CL:0000219,5.59e-08,386;CL:0000134,1.08e-07,354;CL:0002551,1.25e-07,6;CL:0002334,1.79e-07,12;CL:0002320,4.32e-07,361;CL:0000192,6.52e-07,43;CL:0000514,6.52e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002067;1.03e-10;9!UBERON:0002199;4.03e-09;46!UBERON:0002416;4.03e-09;46!UBERON:0003102;5.59e-09;50!UBERON:0002097;1.11e-08;41!UBERON:0004573;2.21e-08;33!UBERON:0004571;2.21e-08;33!UBERON:0001758;3.27e-08;6!UBERON:0003672;3.27e-08;6!UBERON:0001013;3.55e-08;14!UBERON:0002384;3.47e-07;198!UBERON:0003129;7.60e-07;7 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.61e-21!83;UBERON:0002329!3.61e-21!83;UBERON:0003077!3.61e-21!83;UBERON:0003059!3.61e-21!83;UBERON:0007282!3.61e-21!83;UBERON:0009618!3.61e-21!83;UBERON:0007285!3.61e-21!83;UBERON:0004290!5.92e-18!70;UBERON:0000486!7.60e-15!82;UBERON:0000475!3.18e-14!365;UBERON:0001134!8.96e-13!61;UBERON:0002036!8.96e-13!61;UBERON:0003082!8.96e-13!61;UBERON:0003102!1.23e-12!95;UBERON:0002385!7.83e-12!63;UBERON:0001015!7.83e-12!63;UBERON:0000383!7.83e-12!63;UBERON:0002199!1.57e-11!45;UBERON:0002416!1.57e-11!45;UBERON:0002097!7.93e-10!40;UBERON:0007023!2.66e-08!115;UBERON:0002067!9.34e-08!9;UBERON:0004016!9.34e-08!9;UBERON:0010083!9.34e-08!9;UBERON:0004573!2.17e-07!33;UBERON:0004571!2.17e-07!33;UBERON:0000481!2.56e-07!347;UBERON:0000924!2.84e-07!173;UBERON:0006601!2.84e-07!173;UBERON:0004872!4.49e-07!84;UBERON:0001637!4.86e-07!42;UBERON:0003509!4.86e-07!42;UBERON:0004572!4.86e-07!42;UBERON:0004121!6.18e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.03e-10;9!UBERON:0002199;4.03e-09;46!UBERON:0002416;4.03e-09;46!UBERON:0003102;5.59e-09;50!UBERON:0002097;1.11e-08;41!UBERON:0004573;2.21e-08;33!UBERON:0004571;2.21e-08;33!UBERON:0001758;3.27e-08;6!UBERON:0003672;3.27e-08;6!UBERON:0001013;3.55e-08;14!UBERON:0002384;3.47e-07;198!UBERON:0003129;7.60e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.64e-16,73;UBERON:0002329,7.53e-16,71;UBERON:0003059,7.53e-16,71;UBERON:0007282,7.53e-16,71;UBERON:0004290,7.53e-16,71;UBERON:0009618,7.53e-16,71;UBERON:0003077,1.89e-15,72;UBERON:0007285,1.89e-15,72;UBERON:0002199,2.03e-14,46;UBERON:0002416,2.03e-14,46;UBERON:0000486,2.15e-14,83;UBERON:0007503,2.73e-13,78;UBERON:0003102,3.02e-13,99;UBERON:0002097,9.58e-12,41;UBERON:0002067,6.97e-11,9;UBERON:0004016,6.97e-11,9;UBERON:0010083,6.97e-11,9;UBERON:0001134,1.21e-09,62;UBERON:0002036,1.21e-09,62;UBERON:0003082,1.21e-09,62;UBERON:0004573,3.72e-09,33;UBERON:0004571,3.72e-09,33;UBERON:0002385,4.57e-09,64;UBERON:0001015,4.57e-09,64;UBERON:0000383,4.57e-09,64;UBERON:0001637,1.58e-08,42;UBERON:0003509,1.58e-08,42;UBERON:0004572,1.58e-08,42;UBERON:0001013,3.21e-08,14;UBERON:0001758,3.29e-08,6;UBERON:0003672,3.29e-08,6;UBERON:0003129,7.63e-07,7 | |||
|phase1_expression=6.17706489519893,2.99740733447376,1.26858963686374,3.00219895059391,0,1.74467704820074,0,5.05375898741465,3.13422753839806,0,0,0,0,0.37129905888014,0.331397375727916,4.70627602516243,6.62963980826375,2.92124036154949,5.85519358548608,0.123121058076788,0.204000691244253,0.313454721478088,3.72106783270374,3.55873505189499,0.376627918784408,1.98674854944673,2.21671591514854,1.41679406364623,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.767175371061182,1.0843174571537,6.01605492763067,3.18662341713812,3.1811437882044,1.45990461090791,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,5.31848148991235,0.926864265692532,4.30254931123221,6.73869926176878,0.560677600142307,1.06748995729705,0.98667019366864,4.66816553099649,0.269421344139376,0.326923806226917,0,0,0.234321431833797,3.74592092196385,7.41613368007784,2.83952493048422,3.75790395660048,9.2267578289835,5.89893388149444,2.85815839756851,3.19369225010597,3.09977343527296,11.8800285728205,10.6324779589779,0,0,7.74346124188705,7.88246675193374,6.37247465613621,4.38977620880838,3.37136575378922,23.8878513661489,0.113432183160021,5.02290979928813,5.55249210928275,0.211931901159562,0.600182192168805,0.824420233907511,3.60696756063881,4.28068769562657,10.9704615956823,5.74878330451072,0.757301322732344,1.19664868234989,4.20279747728911,3.19508633264953,2.11579406278045,1.18692414617341,0,0,0,0,0,0.464775771478074,0.414644220061482,0,0.36497735907583,4.69348596989448,16.724264393015,4.14404764057442,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0.102827492703324,0,0,0.448524337381443,0.43596006883328,3.5202377194056,0,3.57656445851882,1.690605505112,0.26593811658487,0,2.57207374262142,0,2.1313774321288,0,0.542621605391443,0.823240336780769,2.28015329005615,0,0,0,0,0,0,0,0,0.718874566474748,3.44585807502342,4.27910715122155,1.44781306667579,2.87666851570537,0.895304816199478,0,0,0,0,0.76228387266739,0,3.09315525111078,0.502548796003046,3.82763250991898,0,0,0,0.49076596687656,0,0,13.1021642764408,3.92543775353756,2.68094105557689,16.3997980989798,1.50473049863859,0,2.0694614258501,3.98535359121262,2.21243002250044,3.30157734978715,0.391602314925481,0,0,0,0,0,0,0,2.72918588600655,11.0492620767405,7.01650236082684,0.512556597022804,4.60536524160033,0.321707842287215,0,6.47680713971153,6.21466038595945,11.9905647780161,2.07701771673448,4.53220475993841,0,0,0,0,0.910455840033585,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,2.27764876265012,0.515205058238611,0,0,2.29706215198469,0,0,1.35339005608971,0.462145851343933,0.921022048356777,2.34322173223702,1.6113036730241,0.870100163485371,3.32383846922794,1.4245125703478,0,0,0,0,0.464845549297286,0.62962469366128,1.3940745403212,2.7723022215848,1.06461206063404,3.47973196830029,1.8532421910392,0.143124886741991,1.116475108079,0.316379424718726,0,0.511795582622668,0,6.0458617105928,0,0,0,0.235624804691373,1.01091240786658,0,1.68503382495592,0,3.41198885483798,1.05650146756755,0.272999822815972,0,6.78048699721457,6.06501877900737,1.99031692572366,1.75380354101505,0,1.9676842561399,0.405820753925408,2.16876448669825,1.40847801266121,0.860468113224309,0,0,2.83808851256478,5.48879851773927,3.95153871551882,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.890894042497916,0,0.994147647766298,0.844016498463076,0,0,0.211125408127993,1.19548792950642,0.276283915531148,0,0,2.95403533106567,0.933118762985422,0,0,0,1.479651084554,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.520874984799877,0.885741385813839,0.723578631752448,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,2.15460723810632,0,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0.0884575645033392,0.611030144933625,0,0,0,1.01101699471016,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,0,0,14.0274206775243,0,0,0,0,0,0,0,3.60554149834161,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.387956065953678,0,3.61569185248852,0,0.993573058514948,0.316553979779393,0,0,0.426905989478705,0,0,0,0,0,0,0,0.67952103036807,0.941425616810999,0,0,0.600420288709789,0.410716136675979,0,0,0,1.11712960508902,0.916641696046735,0.717873024576814,0.399358000997982,0,0.446342914883745,0.604651252380536,0.360299883542404,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,3.57347663186684,0,11.187815656809,0.542999601753713,0,0.653174720218818,0,0,3.23737241392301,0,0,0,1.16354660725395,0.13223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| ||
|short_description=p11@PRRX1 | |short_description=p11@PRRX1 | ||
}} | }} |
Latest revision as of 14:10, 18 September 2015
Short description: | p11@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PRRX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 164bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.30e-23 | 76 |
multi fate stem cell | 2.82e-15 | 427 |
somatic stem cell | 1.48e-14 | 433 |
stem cell | 1.24e-13 | 441 |
skin fibroblast | 4.11e-13 | 23 |
muscle precursor cell | 1.74e-09 | 58 |
myoblast | 1.74e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-09 | 58 |
vascular associated smooth muscle cell | 3.68e-09 | 32 |
mesenchymal stem cell of adipose | 7.32e-09 | 8 |
muscle cell | 7.94e-09 | 55 |
electrically responsive cell | 9.02e-09 | 61 |
electrically active cell | 9.02e-09 | 61 |
fibroblast of periodontium | 3.29e-08 | 6 |
motile cell | 5.59e-08 | 386 |
mesenchymal cell | 1.08e-07 | 354 |
fibroblast of dermis | 1.25e-07 | 6 |
preadipocyte | 1.79e-07 | 12 |
connective tissue cell | 4.32e-07 | 361 |
smooth muscle cell | 6.52e-07 | 43 |
smooth muscle myoblast | 6.52e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.64e-16 | 73 |
somite | 7.53e-16 | 71 |
presomitic mesoderm | 7.53e-16 | 71 |
presumptive segmental plate | 7.53e-16 | 71 |
dermomyotome | 7.53e-16 | 71 |
trunk paraxial mesoderm | 7.53e-16 | 71 |
paraxial mesoderm | 1.89e-15 | 72 |
presumptive paraxial mesoderm | 1.89e-15 | 72 |
integument | 2.03e-14 | 46 |
integumental system | 2.03e-14 | 46 |
multilaminar epithelium | 2.15e-14 | 83 |
epithelial vesicle | 2.73e-13 | 78 |
surface structure | 3.02e-13 | 99 |
skin of body | 9.58e-12 | 41 |
dermis | 6.97e-11 | 9 |
dermatome | 6.97e-11 | 9 |
future dermis | 6.97e-11 | 9 |
skeletal muscle tissue | 1.21e-09 | 62 |
striated muscle tissue | 1.21e-09 | 62 |
myotome | 1.21e-09 | 62 |
systemic artery | 3.72e-09 | 33 |
systemic arterial system | 3.72e-09 | 33 |
muscle tissue | 4.57e-09 | 64 |
musculature | 4.57e-09 | 64 |
musculature of body | 4.57e-09 | 64 |
artery | 1.58e-08 | 42 |
arterial blood vessel | 1.58e-08 | 42 |
arterial system | 1.58e-08 | 42 |
adipose tissue | 3.21e-08 | 14 |
periodontium | 3.29e-08 | 6 |
dentition | 3.29e-08 | 6 |
skull | 7.63e-07 | 7 |