FFCP PHASE1:Hg19::chr1:170632285..170632309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=10bp_to_ENST00000367760_5end | |association_with_transcript=10bp_to_ENST00000367760_5end | ||
|cluster_id=chr1:170632285..170632309,+ | |||
|coexpression_cluster_id=C929 | |coexpression_cluster_id=C929 | ||
|description=CAGE_peak_1_at_PRRX1_5end | |description=CAGE_peak_1_at_PRRX1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.38e-37!180;CL:0000057!1.25e-24!75;CL:0000680!1.02e-12!57;CL:0000056!1.02e-12!57;CL:0000355!1.02e-12!57;CL:0000187!9.15e-12!54;CL:0002620!1.03e-11!23;CL:0000183!1.91e-10!59;CL:0000393!4.19e-10!60;CL:0000211!4.19e-10!60;CL:0000192!1.23e-08!42;CL:0000514!1.23e-08!42;CL:0000359!5.87e-08!32;CL:0002334!8.75e-08!12;CL:0000136!3.88e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.38e-37!180;CL:0000057!1.25e-24!75;CL:0000680!1.02e-12!57;CL:0000056!1.02e-12!57;CL:0000355!1.02e-12!57;CL:0000187!9.15e-12!54;CL:0002620!1.03e-11!23;CL:0000183!1.91e-10!59;CL:0000393!4.19e-10!60;CL:0000211!4.19e-10!60;CL:0000192!1.23e-08!42;CL:0000514!1.23e-08!42;CL:0000359!5.87e-08!32;CL:0002334!8.75e-08!12;CL:0000136!3.88e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.26e-12;23!CL:0000057;5.02e-10;73!CL:0002334;3.80e-08;12!CL:0002320;1.24e-07;188!CL:0000359;1.32e-07;32!CL:0000187;3.64e-07;55!CL:0002570;5.35e-07;8!CL:0000192;6.58e-07;43 | |ontology_enrichment_celltype_v019=CL:0002620;2.26e-12;23!CL:0000057;5.02e-10;73!CL:0002334;3.80e-08;12!CL:0002320;1.24e-07;188!CL:0000359;1.32e-07;32!CL:0000187;3.64e-07;55!CL:0002570;5.35e-07;8!CL:0000192;6.58e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-25,76;CL:0000680,2.61e-13,58;CL:0000056,2.61e-13,58;CL:0000355,2.61e-13,58;CL:0002620,2.17e-12,23;CL:0000187,2.65e-12,55;CL:0000393,2.51e-10,61;CL:0000211,2.51e-10,61;CL:0000192,5.33e-09,43;CL:0000514,5.33e-09,43;CL:0002334,3.73e-08,12;CL:0000359,6.56e-08,32;CL:0000136,1.81e-07,15;CL:0000048,2.01e-07,427;CL:0002570,5.50e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;2.53e-07;58!CL:0000514;6.58e-07;43 | |ontology_enrichment_development_v019=CL:0000355;2.53e-07;58!CL:0000514;6.58e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.04e-22!83;UBERON:0002329!4.04e-22!83;UBERON:0003077!4.04e-22!83;UBERON:0003059!4.04e-22!83;UBERON:0007282!4.04e-22!83;UBERON:0009618!4.04e-22!83;UBERON:0007285!4.04e-22!83;UBERON:0004290!9.61e-19!70;UBERON:0000475!1.19e-16!365;UBERON:0000486!3.99e-15!82;UBERON:0003102!1.19e-14!95;UBERON:0002385!2.89e-14!63;UBERON:0001015!2.89e-14!63;UBERON:0000383!2.89e-14!63;UBERON:0001134!3.61e-14!61;UBERON:0002036!3.61e-14!61;UBERON:0003082!3.61e-14!61;UBERON:0002199!1.61e-11!45;UBERON:0002416!1.61e-11!45;UBERON:0007023!5.15e-11!115;UBERON:0000468!2.80e-10!659;UBERON:0002097!2.75e-09!40;UBERON:0001013!4.92e-09!14;UBERON:0000481!6.84e-09!347;UBERON:0000479!6.88e-09!787;UBERON:0004872!8.05e-08!84;UBERON:0005256!8.93e-08!143;UBERON:0000153!4.03e-07!129;UBERON:0007811!4.03e-07!129;UBERON:0000924!6.49e-07!173;UBERON:0006601!6.49e-07!173;UBERON:0000078!7.32e-07!18;UBERON:0000033!7.61e-07!123;UBERON:0001637!8.89e-07!42;UBERON:0003509!8.89e-07!42;UBERON:0004572!8.89e-07!42 | |ontology_enrichment_uberon=UBERON:0000914!4.04e-22!83;UBERON:0002329!4.04e-22!83;UBERON:0003077!4.04e-22!83;UBERON:0003059!4.04e-22!83;UBERON:0007282!4.04e-22!83;UBERON:0009618!4.04e-22!83;UBERON:0007285!4.04e-22!83;UBERON:0004290!9.61e-19!70;UBERON:0000475!1.19e-16!365;UBERON:0000486!3.99e-15!82;UBERON:0003102!1.19e-14!95;UBERON:0002385!2.89e-14!63;UBERON:0001015!2.89e-14!63;UBERON:0000383!2.89e-14!63;UBERON:0001134!3.61e-14!61;UBERON:0002036!3.61e-14!61;UBERON:0003082!3.61e-14!61;UBERON:0002199!1.61e-11!45;UBERON:0002416!1.61e-11!45;UBERON:0007023!5.15e-11!115;UBERON:0000468!2.80e-10!659;UBERON:0002097!2.75e-09!40;UBERON:0001013!4.92e-09!14;UBERON:0000481!6.84e-09!347;UBERON:0000479!6.88e-09!787;UBERON:0004872!8.05e-08!84;UBERON:0005256!8.93e-08!143;UBERON:0000153!4.03e-07!129;UBERON:0007811!4.03e-07!129;UBERON:0000924!6.49e-07!173;UBERON:0006601!6.49e-07!173;UBERON:0000078!7.32e-07!18;UBERON:0000033!7.61e-07!123;UBERON:0001637!8.89e-07!42;UBERON:0003509!8.89e-07!42;UBERON:0004572!8.89e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.12e-10;31!UBERON:0001015;8.12e-10;31!UBERON:0000383;8.12e-10;31!UBERON:0001013;1.67e-09;14!UBERON:0002384;8.63e-09;198!UBERON:0002199;1.52e-08;46!UBERON:0002416;1.52e-08;46!UBERON:0002204;2.32e-08;70!UBERON:0002097;3.91e-08;41!UBERON:0003102;1.01e-07;50!UBERON:0001134;1.82e-07;16!UBERON:0002036;1.82e-07;16!UBERON:0002067;7.31e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002385;8.12e-10;31!UBERON:0001015;8.12e-10;31!UBERON:0000383;8.12e-10;31!UBERON:0001013;1.67e-09;14!UBERON:0002384;8.63e-09;198!UBERON:0002199;1.52e-08;46!UBERON:0002416;1.52e-08;46!UBERON:0002204;2.32e-08;70!UBERON:0002097;3.91e-08;41!UBERON:0003102;1.01e-07;50!UBERON:0001134;1.82e-07;16!UBERON:0002036;1.82e-07;16!UBERON:0002067;7.31e-07;9 | ||
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| ||
|short_description=p1@PRRX1 | |short_description=p1@PRRX1 | ||
}} | }} |
Latest revision as of 14:08, 18 September 2015
Short description: | p1@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 10bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-25 | 76 |
muscle precursor cell | 2.61e-13 | 58 |
myoblast | 2.61e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.61e-13 | 58 |
skin fibroblast | 2.17e-12 | 23 |
muscle cell | 2.65e-12 | 55 |
electrically responsive cell | 2.51e-10 | 61 |
electrically active cell | 2.51e-10 | 61 |
smooth muscle cell | 5.33e-09 | 43 |
smooth muscle myoblast | 5.33e-09 | 43 |
preadipocyte | 3.73e-08 | 12 |
vascular associated smooth muscle cell | 6.56e-08 | 32 |
fat cell | 1.81e-07 | 15 |
multi fate stem cell | 2.01e-07 | 427 |
mesenchymal stem cell of adipose | 5.50e-07 | 8 |