FFCP PHASE1:Hg19::chr1:170632250..170632277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=0bp_to_ENST00000367760_5end | |association_with_transcript=0bp_to_ENST00000367760_5end | ||
|cluster_id=chr1:170632250..170632277,+ | |||
|coexpression_cluster_id=C929 | |coexpression_cluster_id=C929 | ||
|description=CAGE_peak_7_at_PRRX1_5end | |description=CAGE_peak_7_at_PRRX1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.78e-39!180;CL:0000057!5.13e-24!75;CL:0000680!5.79e-16!57;CL:0000056!5.79e-16!57;CL:0000355!5.79e-16!57;CL:0000187!1.27e-14!54;CL:0000183!2.60e-13!59;CL:0002620!1.83e-12!23;CL:0000393!2.49e-11!60;CL:0000211!2.49e-11!60;CL:0000192!3.54e-11!42;CL:0000514!3.54e-11!42;CL:0000359!1.55e-09!32;CL:0000048!2.45e-07!430;CL:0002334!5.43e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.78e-39!180;CL:0000057!5.13e-24!75;CL:0000680!5.79e-16!57;CL:0000056!5.79e-16!57;CL:0000355!5.79e-16!57;CL:0000187!1.27e-14!54;CL:0000183!2.60e-13!59;CL:0002620!1.83e-12!23;CL:0000393!2.49e-11!60;CL:0000211!2.49e-11!60;CL:0000192!3.54e-11!42;CL:0000514!3.54e-11!42;CL:0000359!1.55e-09!32;CL:0000048!2.45e-07!430;CL:0002334!5.43e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.39e-14;23!CL:0000057;3.15e-10;73!CL:0000359;4.86e-10;32!CL:0000187;3.40e-09;55!CL:0002320;3.94e-09;188!CL:0000192;6.73e-09;43!CL:0002334;2.41e-08;12!CL:0000499;5.59e-08;28!CL:0002570;1.48e-07;8!CL:0000134;2.84e-07;55!CL:0000723;2.92e-07;61!CL:0000393;3.44e-07;61!CL:0000211;3.44e-07;61 | |ontology_enrichment_celltype_v019=CL:0002620;1.39e-14;23!CL:0000057;3.15e-10;73!CL:0000359;4.86e-10;32!CL:0000187;3.40e-09;55!CL:0002320;3.94e-09;188!CL:0000192;6.73e-09;43!CL:0002334;2.41e-08;12!CL:0000499;5.59e-08;28!CL:0002570;1.48e-07;8!CL:0000134;2.84e-07;55!CL:0000723;2.92e-07;61!CL:0000393;3.44e-07;61!CL:0000211;3.44e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.51e-28,76;CL:0000680,1.54e-17,58;CL:0000056,1.54e-17,58;CL:0000355,1.54e-17,58;CL:0000048,3.03e-16,427;CL:0000187,5.71e-16,55;CL:0000723,2.81e-15,433;CL:0002620,8.95e-15,23;CL:0000034,4.80e-14,441;CL:0000393,6.50e-13,61;CL:0000211,6.50e-13,61;CL:0000192,8.80e-12,43;CL:0000514,8.80e-12,43;CL:0000359,1.44e-10,32;CL:0002334,3.09e-08,12;CL:0002320,4.32e-08,361;CL:0000499,5.59e-08,28;CL:0002570,1.24e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;3.78e-09;58!CL:0000514;6.73e-09;43 | |ontology_enrichment_development_v019=CL:0000355;3.78e-09;58!CL:0000514;6.73e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.77e-26!83;UBERON:0002329!4.77e-26!83;UBERON:0003077!4.77e-26!83;UBERON:0003059!4.77e-26!83;UBERON:0007282!4.77e-26!83;UBERON:0009618!4.77e-26!83;UBERON:0007285!4.77e-26!83;UBERON:0004290!1.62e-22!70;UBERON:0000486!2.26e-18!82;UBERON:0001134!1.67e-17!61;UBERON:0002036!1.67e-17!61;UBERON:0003082!1.67e-17!61;UBERON:0002385!2.35e-17!63;UBERON:0001015!2.35e-17!63;UBERON:0000383!2.35e-17!63;UBERON:0000475!2.64e-16!365;UBERON:0003102!3.70e-13!95;UBERON:0002199!3.92e-11!45;UBERON:0002416!3.92e-11!45;UBERON:0002097!1.51e-09!40;UBERON:0005256!2.11e-09!143;UBERON:0000479!8.16e-09!787;UBERON:0000481!1.25e-08!347;UBERON:0000468!5.39e-08!659;UBERON:0004872!4.00e-07!84;UBERON:0001637!4.90e-07!42;UBERON:0003509!4.90e-07!42;UBERON:0004572!4.90e-07!42;UBERON:0002100!7.03e-07!216;UBERON:0004573!8.49e-07!33;UBERON:0004571!8.49e-07!33;UBERON:0002067!8.90e-07!9;UBERON:0004016!8.90e-07!9;UBERON:0010083!8.90e-07!9;UBERON:0000119!9.61e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!4.77e-26!83;UBERON:0002329!4.77e-26!83;UBERON:0003077!4.77e-26!83;UBERON:0003059!4.77e-26!83;UBERON:0007282!4.77e-26!83;UBERON:0009618!4.77e-26!83;UBERON:0007285!4.77e-26!83;UBERON:0004290!1.62e-22!70;UBERON:0000486!2.26e-18!82;UBERON:0001134!1.67e-17!61;UBERON:0002036!1.67e-17!61;UBERON:0003082!1.67e-17!61;UBERON:0002385!2.35e-17!63;UBERON:0001015!2.35e-17!63;UBERON:0000383!2.35e-17!63;UBERON:0000475!2.64e-16!365;UBERON:0003102!3.70e-13!95;UBERON:0002199!3.92e-11!45;UBERON:0002416!3.92e-11!45;UBERON:0002097!1.51e-09!40;UBERON:0005256!2.11e-09!143;UBERON:0000479!8.16e-09!787;UBERON:0000481!1.25e-08!347;UBERON:0000468!5.39e-08!659;UBERON:0004872!4.00e-07!84;UBERON:0001637!4.90e-07!42;UBERON:0003509!4.90e-07!42;UBERON:0004572!4.90e-07!42;UBERON:0002100!7.03e-07!216;UBERON:0004573!8.49e-07!33;UBERON:0004571!8.49e-07!33;UBERON:0002067!8.90e-07!9;UBERON:0004016!8.90e-07!9;UBERON:0010083!8.90e-07!9;UBERON:0000119!9.61e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.95e-11;31!UBERON:0001015;1.95e-11;31!UBERON:0000383;1.95e-11;31!UBERON:0002384;1.78e-10;198!UBERON:0002204;3.36e-10;70!UBERON:0002097;2.75e-09;41!UBERON:0002199;2.83e-09;46!UBERON:0002416;2.83e-09;46!UBERON:0001134;3.44e-09;16!UBERON:0002036;3.44e-09;16!UBERON:0003102;5.66e-09;50!UBERON:0001013;7.97e-08;14!UBERON:0002067;8.79e-08;9!UBERON:0004573;1.21e-07;33!UBERON:0004571;1.21e-07;33!UBERON:0001434;1.81e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0002385;1.95e-11;31!UBERON:0001015;1.95e-11;31!UBERON:0000383;1.95e-11;31!UBERON:0002384;1.78e-10;198!UBERON:0002204;3.36e-10;70!UBERON:0002097;2.75e-09;41!UBERON:0002199;2.83e-09;46!UBERON:0002416;2.83e-09;46!UBERON:0001134;3.44e-09;16!UBERON:0002036;3.44e-09;16!UBERON:0003102;5.66e-09;50!UBERON:0001013;7.97e-08;14!UBERON:0002067;8.79e-08;9!UBERON:0004573;1.21e-07;33!UBERON:0004571;1.21e-07;33!UBERON:0001434;1.81e-07;36 | ||
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| ||
|short_description=p7@PRRX1 | |short_description=p7@PRRX1 | ||
}} | }} |
Latest revision as of 14:07, 18 September 2015
Short description: | p7@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.51e-28 | 76 |
muscle precursor cell | 1.54e-17 | 58 |
myoblast | 1.54e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-17 | 58 |
multi fate stem cell | 3.03e-16 | 427 |
muscle cell | 5.71e-16 | 55 |
somatic stem cell | 2.81e-15 | 433 |
skin fibroblast | 8.95e-15 | 23 |
stem cell | 4.80e-14 | 441 |
electrically responsive cell | 6.50e-13 | 61 |
electrically active cell | 6.50e-13 | 61 |
smooth muscle cell | 8.80e-12 | 43 |
smooth muscle myoblast | 8.80e-12 | 43 |
vascular associated smooth muscle cell | 1.44e-10 | 32 |
preadipocyte | 3.09e-08 | 12 |
connective tissue cell | 4.32e-08 | 361 |
stromal cell | 5.59e-08 | 28 |
mesenchymal stem cell of adipose | 1.24e-07 | 8 |