FFCP PHASE1:Hg19::chr1:170632137..170632172,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:170632137..170632172,+ to FFCP PHASE1:Hg19::chr1:170632137..170632172,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=-102bp_to_ENST00000367760_5end | |||
|cluster_id=chr1:170632137..170632172,+ | |||
|coexpression_cluster_id=C3903 | |||
|description=CAGE_peak_10_at_PRRX1_5end | |||
|id=chr1:170632137..170632172,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.71e-30!180;CL:0000057!4.78e-24!75;CL:0002620!4.18e-12!23;CL:0000680!1.21e-10!57;CL:0000056!1.21e-10!57;CL:0000355!1.21e-10!57;CL:0000187!9.19e-10!54;CL:0000183!9.57e-09!59;CL:0000359!3.39e-08!32;CL:0002334!4.05e-08!12;CL:0000192!7.80e-08!42;CL:0000514!7.80e-08!42;CL:0000393!8.84e-08!60;CL:0000211!8.84e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.83e-15;23!CL:0000057;2.69e-10;73!CL:0002334;2.23e-09;12!CL:0002570;2.49e-08;8!CL:0000359;6.07e-08;32!CL:0002320;6.27e-08;188!CL:0002539;7.51e-08;10!CL:0002556;1.03e-07;6!CL:0000723;1.48e-07;61!CL:0000134;1.95e-07;55!CL:0002551;7.39e-07;6!CL:0000048;8.96e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.20e-24,76;CL:0002620,3.17e-15,23;CL:0000048,9.46e-15,427;CL:0000723,5.72e-14,433;CL:0000034,5.70e-13,441;CL:0002334,1.87e-09,12;CL:0000680,7.29e-09,58;CL:0000056,7.29e-09,58;CL:0000355,7.29e-09,58;CL:0002320,9.49e-09,361;CL:0000134,1.46e-08,354;CL:0002570,1.85e-08,8;CL:0000187,2.22e-08,55;CL:0000359,3.61e-08,32;CL:0002539,5.64e-08,10;CL:0002556,9.53e-08,6;CL:0000219,1.99e-07,386;CL:0002551,5.69e-07,6;CL:0000393,9.82e-07,61;CL:0000211,9.82e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.73e-19!83;UBERON:0002329!4.73e-19!83;UBERON:0003077!4.73e-19!83;UBERON:0003059!4.73e-19!83;UBERON:0007282!4.73e-19!83;UBERON:0009618!4.73e-19!83;UBERON:0007285!4.73e-19!83;UBERON:0004290!9.64e-15!70;UBERON:0000475!2.23e-14!365;UBERON:0003102!1.50e-13!95;UBERON:0000486!6.67e-12!82;UBERON:0001134!4.65e-11!61;UBERON:0002036!4.65e-11!61;UBERON:0003082!4.65e-11!61;UBERON:0002385!1.21e-10!63;UBERON:0001015!1.21e-10!63;UBERON:0000383!1.21e-10!63;UBERON:0002199!1.28e-10!45;UBERON:0002416!1.28e-10!45;UBERON:0000479!1.23e-09!787;UBERON:0002097!3.79e-09!40;UBERON:0001013!2.96e-08!14;UBERON:0007023!4.92e-08!115;UBERON:0000468!1.02e-07!659;UBERON:0001637!1.35e-07!42;UBERON:0003509!1.35e-07!42;UBERON:0004572!1.35e-07!42;UBERON:0004573!1.75e-07!33;UBERON:0004571!1.75e-07!33;UBERON:0000481!5.02e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.91e-11;14!UBERON:0002384;3.12e-10;198!UBERON:0002199;1.60e-08;46!UBERON:0002416;1.60e-08;46!UBERON:0004573;4.53e-08;33!UBERON:0004571;4.53e-08;33!UBERON:0002097;4.93e-08;41!UBERON:0004237;7.51e-08;10!UBERON:0004695;7.51e-08;10!UBERON:0002111;7.51e-08;10!UBERON:0004178;7.51e-08;10!UBERON:0001758;1.03e-07;6!UBERON:0003672;1.03e-07;6!UBERON:0002385;1.53e-07;31!UBERON:0001015;1.53e-07;31!UBERON:0000383;1.53e-07;31!UBERON:0002067;1.75e-07;9!UBERON:0003102;2.43e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.34e-15,99;UBERON:0007524,7.80e-14,73;UBERON:0002329,1.47e-13,71;UBERON:0003059,1.47e-13,71;UBERON:0007282,1.47e-13,71;UBERON:0004290,1.47e-13,71;UBERON:0009618,1.47e-13,71;UBERON:0002199,3.41e-13,46;UBERON:0002416,3.41e-13,46;UBERON:0003077,3.49e-13,72;UBERON:0007285,3.49e-13,72;UBERON:0000486,1.82e-11,83;UBERON:0007503,3.64e-11,78;UBERON:0001013,3.95e-11,14;UBERON:0002097,5.15e-11,41;UBERON:0002384,3.81e-09,371;UBERON:0001134,4.48e-09,62;UBERON:0002036,4.48e-09,62;UBERON:0003082,4.48e-09,62;UBERON:0002385,1.73e-08,64;UBERON:0001015,1.73e-08,64;UBERON:0000383,1.73e-08,64;UBERON:0004573,2.69e-08,33;UBERON:0004571,2.69e-08,33;UBERON:0001637,3.89e-08,42;UBERON:0003509,3.89e-08,42;UBERON:0004572,3.89e-08,42;UBERON:0004237,5.64e-08,10;UBERON:0004695,5.64e-08,10;UBERON:0002111,5.64e-08,10;UBERON:0004178,5.64e-08,10;UBERON:0001758,9.53e-08,6;UBERON:0003672,9.53e-08,6;UBERON:0002067,1.44e-07,9;UBERON:0004016,1.44e-07,9;UBERON:0010083,1.44e-07,9 | |||
|phase1_expression=4.90531624030503,4.92431204949261,2.11431606143957,0,0.446961094427288,4.36169262050184,0,3.15859936713415,3.65659879479774,0,0,0,0,0.618831764800233,0.662794751455832,6.05092631806598,3.01347264011988,2.92124036154949,5.36726078669558,0.123121058076788,0.408001382488506,0.313454721478088,0.572471974262113,0.684372125364421,0,4.66121775062503,4.59763300919696,4.01424984699764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,3.2529523714611,5.0133791063589,6.95263291011954,3.1811437882044,2.91980922181582,0,0,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,1.98788780678127,3.03913227994991,1.05927344650575,1.43418310374407,2.12801029319014,2.24271040056923,0,0.49333509683432,0.311211035399766,1.0776853765575,0.326923806226917,0.605429710579726,0,0.937285727335186,5.30672130611545,3.99330275081114,3.88566569434683,7.28093891591342,4.85618833104395,8.28659759543266,6.32877930890169,4.17636678860011,9.40264608699466,8.31602000097437,10.6324779589779,0.910161361938026,0.718618141816238,7.57512512793298,6.25592599359821,9.6972440419464,8.77955241761676,4.90380473278431,18.9299954222312,0.226864366320042,3.58779271377724,5.97960688691989,2.96704661623387,0.900273288253207,2.98852334791473,1.28820270022815,4.09457083929498,3.03797398034279,6.43084234063911,1.26216887122057,2.48534726334208,11.6385160909545,2.13005755509969,2.41805035746337,2.7129694769678,0,0,0,0,0,0.116193942869518,0,0,0,4.69348596989448,7.07565032012174,0,3.71494342425583,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.977424915930974,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.784917590417525,1.30788020649984,1.68678057388185,0.646358578788889,10.7296933755565,6.762422020448,2.92531928243358,3.12022310734098,1.28603687131071,1.41849132023278,0.799266537048298,0,0.542621605391443,0,1.95441710576241,0,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,2.85273810081437,0.868687840005475,2.87666851570537,1.43248770591916,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,1.71768088406796,1.00034104211935,0.271265023699736,8.52680532276309,5.88815663030634,3.78485796081443,11.7141414992713,2.10662269809403,2.27407504055985,0,5.97803038681893,2.02806085395873,7.55887445872321,0.195801157462741,1.02943027143257,0,0,0,0,0,0,4.21783273291921,2.91577749247319,4.77122160536225,2.17836553734692,5.62877973973374,0.64341568457443,2.96836132889982,5.70575867069826,6.39222211127257,7.55569835327044,6.75030757938707,4.29978400301849,0,0,0,0.34444334449382,1.45672934405374,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.618246069886334,0,0,1.14853107599234,0.650060246036521,0,2.22342652071881,1.07834031980251,0.614014698904518,1.37836572484531,1.93356440762893,1.45016693914229,1.96021243057032,2.22580089116843,0,0,0,0,1.85938219718914,1.88887408098384,2.0911118104818,3.08033580176089,1.59691809095107,3.47973196830029,2.22389062924704,1.00187420719394,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,6.36406495851874,3.13979456079692,0.179872457583315,0,0.235624804691373,1.41527737101321,0,2.52755073743389,0,7.31140468893853,0,2.04749867111979,0.141405431953713,7.910568163417,0,1.32687795048244,0.438450885253763,0,1.9676842561399,1.01455188481352,1.54911749049875,2.25356482025793,0.430234056612155,0.0982490410131212,0,3.54761064070598,5.48879851773927,10.208141681757,2.65631221636001,0.699869440489966,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73937624650712,0,0,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0,1.19548792950642,0.552567831062295,0,0,13.7854982116398,1.86623752597084,0,0,0,1.7755813014648,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0.173624994933292,1.77148277162768,0.60298219312704,1.52581736317083,0.331737779793674,0.295547618953547,0,0,0,3.84751292518985,0.113942055847001,0,0,0,0.31900115973192,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,8.00637967045737,0,0.265372693510018,1.22206028986725,0.296521128680622,0.247127877893006,0.208843899010911,0.337005664903385,3.21031058919516,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,0,16.8708167608063,0,0,0,0,0,0,0,2.4961441142365,0,0,0,2.09672001890436,0.171986032471617,0,0,0,1.16386819786103,0,4.06765333404958,0,0.596143835108969,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0.543616824294456,1.255234155748,0,0,0.600420288709789,0.821432273351958,0,0,0.262887354279314,1.67569440763353,0.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| ||
|short_description=p10@PRRX1 | |||
}} | }} |
Latest revision as of 14:07, 18 September 2015
Short description: | p10@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PRRX1_5end |
Coexpression cluster: | C3903_peripheral_splenic_mesenchymal_neuroectodermal_b_dura_Fibroblast |
Association with transcript: | -102bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.20e-24 | 76 |
skin fibroblast | 3.17e-15 | 23 |
multi fate stem cell | 9.46e-15 | 427 |
somatic stem cell | 5.72e-14 | 433 |
stem cell | 5.70e-13 | 441 |
preadipocyte | 1.87e-09 | 12 |
muscle precursor cell | 7.29e-09 | 58 |
myoblast | 7.29e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.29e-09 | 58 |
connective tissue cell | 9.49e-09 | 361 |
mesenchymal cell | 1.46e-08 | 354 |
mesenchymal stem cell of adipose | 1.85e-08 | 8 |
muscle cell | 2.22e-08 | 55 |
vascular associated smooth muscle cell | 3.61e-08 | 32 |
aortic smooth muscle cell | 5.64e-08 | 10 |
fibroblast of periodontium | 9.53e-08 | 6 |
motile cell | 1.99e-07 | 386 |
fibroblast of dermis | 5.69e-07 | 6 |
electrically responsive cell | 9.82e-07 | 61 |
electrically active cell | 9.82e-07 | 61 |