FFCP PHASE1:Hg19::chr1:54304212..54304255,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55706 | |EntrezGene=55706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25525 | |HGNC=25525 | ||
|TSSclassifier=strong | |||
|UniProt=A6NEN1,B4DHA3,Q9BTX1 | |UniProt=A6NEN1,B4DHA3,Q9BTX1 | ||
|association_with_transcript=0bp_to_ENST00000360494,ENST00000540001,NM_001168551,NM_018087,NR_033142_5end | |association_with_transcript=0bp_to_ENST00000360494,ENST00000540001,NM_001168551,NM_018087,NR_033142_5end | ||
|cluster_id=chr1:54304212..54304255,- | |||
|description=CAGE_peak_3_at_TMEM48_5end | |description=CAGE_peak_3_at_TMEM48_5end | ||
|id=chr1:54304212..54304255,- | |id=chr1:54304212..54304255,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!4.14e-12!254 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:1240;8.44e-11;39!DOID:8692;4.22e-09;31!DOID:2531;6.20e-09;51!DOID:0060083;6.20e-09;51 | |ontology_enrichment_celltype_v019_2=CL:0000066,6.88e-11,253 | ||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.35e-33!239;DOID:162!8.42e-33!235;DOID:0050686!1.12e-17!137;DOID:0050687!1.44e-14!143;DOID:2531!5.70e-14!51;DOID:0060083!5.70e-14!51;DOID:305!1.59e-12!106;DOID:1240!3.94e-12!39;DOID:8692!1.39e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.44e-11;39!DOID:8692;4.22e-09;31!DOID:2531;6.20e-09;51!DOID:0060083;6.20e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.64e-30,239;DOID:162,2.50e-30,235;DOID:0050686,2.12e-16,137;DOID:2531,3.40e-14,51;DOID:0060083,3.40e-14,51;DOID:0050687,7.40e-14,143;DOID:1240,5.99e-13,39;DOID:305,1.35e-11,106;DOID:8692,3.95e-10,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TMEM48 | |short_description=p3@TMEM48 | ||
}} | }} |
Latest revision as of 14:06, 18 September 2015
Short description: | p3@TMEM48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM48_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000360494, ENST00000540001, NM_001168551, NM_018087, NR_033142_5end |
EntrezGene: | TMEM48 |
HGNC: | 25525 |
UniProt: | A6NEN1B4DHA3Q9BTX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.88e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.64e-30 | 239 |
cancer | 2.50e-30 | 235 |
organ system cancer | 2.12e-16 | 137 |
hematologic cancer | 3.40e-14 | 51 |
immune system cancer | 3.40e-14 | 51 |
cell type cancer | 7.40e-14 | 143 |
leukemia | 5.99e-13 | 39 |
carcinoma | 1.35e-11 | 106 |
myeloid leukemia | 3.95e-10 | 31 |