FFCP PHASE1:Hg19::chr1:170632115..170632136,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:170632115..170632136,+
|short_description=p9@PRRX1
|description=CAGE_peak_9_at_PRRX1_5end
|association_with_transcript=-138bp_to_ENST00000367760_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=-138bp_to_ENST00000367760_5end | |||
|cluster_id=chr1:170632115..170632136,+ | |||
|coexpression_cluster_id=C3903 | |||
|description=CAGE_peak_9_at_PRRX1_5end | |||
|id=chr1:170632115..170632136,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.39e-30!180;CL:0000057!4.57e-21!75;CL:0000680!1.27e-12!57;CL:0000056!1.27e-12!57;CL:0000355!1.27e-12!57;CL:0000187!2.58e-12!54;CL:0002620!2.01e-11!23;CL:0000359!5.73e-11!32;CL:0000183!1.72e-10!59;CL:0000192!1.87e-10!42;CL:0000514!1.87e-10!42;CL:0000393!1.46e-09!60;CL:0000211!1.46e-09!60;CL:0000048!1.41e-07!430;CL:0000723!7.34e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.09e-13;23!CL:0000057;2.09e-09;73!CL:0002539;1.32e-08;10!CL:0000359;3.18e-08;32!CL:0002570;3.20e-08;8!CL:0002556;2.39e-07;6!CL:0002334;2.71e-07;12!CL:0002320;3.95e-07;188!CL:0000134;5.34e-07;55!CL:0000723;8.33e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.66e-22,76;CL:0002620,1.47e-13,23;CL:0000048,8.63e-13,427;CL:0000723,4.35e-12,433;CL:0000034,3.43e-11,441;CL:0000187,9.72e-09,55;CL:0002539,1.40e-08,10;CL:0000359,2.06e-08,32;CL:0002570,2.26e-08,8;CL:0000680,7.56e-08,58;CL:0000056,7.56e-08,58;CL:0000355,7.56e-08,58;CL:0000134,1.48e-07,354;CL:0002320,1.84e-07,361;CL:0000192,1.85e-07,43;CL:0000514,1.85e-07,43;CL:0002556,2.29e-07,6;CL:0002334,2.45e-07,12;CL:0000393,4.64e-07,61;CL:0000211,4.64e-07,61;CL:0000136,5.12e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.78e-21!83;UBERON:0002329!4.78e-21!83;UBERON:0003077!4.78e-21!83;UBERON:0003059!4.78e-21!83;UBERON:0007282!4.78e-21!83;UBERON:0009618!4.78e-21!83;UBERON:0007285!4.78e-21!83;UBERON:0004290!1.21e-17!70;UBERON:0003102!4.70e-15!95;UBERON:0000486!2.06e-14!82;UBERON:0000475!3.73e-13!365;UBERON:0001134!4.45e-13!61;UBERON:0002036!4.45e-13!61;UBERON:0003082!4.45e-13!61;UBERON:0002385!9.94e-13!63;UBERON:0001015!9.94e-13!63;UBERON:0000383!9.94e-13!63;UBERON:0002199!1.47e-12!45;UBERON:0002416!1.47e-12!45;UBERON:0002097!7.23e-10!40;UBERON:0004872!2.21e-09!84;UBERON:0000479!3.14e-09!787;UBERON:0004573!7.99e-09!33;UBERON:0004571!7.99e-09!33;UBERON:0001637!9.58e-09!42;UBERON:0003509!9.58e-09!42;UBERON:0004572!9.58e-09!42;UBERON:0005256!2.71e-08!143;UBERON:0001013!3.09e-08!14;UBERON:0000468!4.06e-08!659;UBERON:0000481!9.70e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.59e-11;14!UBERON:0002199;8.57e-11;46!UBERON:0002416;8.57e-11;46!UBERON:0002097;1.07e-09;41!UBERON:0003102;6.46e-09;50!UBERON:0002384;6.91e-09;198!UBERON:0002067;1.24e-08;9!UBERON:0004237;1.32e-08;10!UBERON:0004695;1.32e-08;10!UBERON:0002111;1.32e-08;10!UBERON:0004178;1.32e-08;10!UBERON:0004573;2.81e-08;33!UBERON:0004571;2.81e-08;33!UBERON:0001758;2.39e-07;6!UBERON:0003672;2.39e-07;6!UBERON:0000165;5.61e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.23e-18,99;UBERON:0002199,6.08e-17,46;UBERON:0002416,6.08e-17,46;UBERON:0007524,7.75e-14,73;UBERON:0002329,1.49e-13,71;UBERON:0003059,1.49e-13,71;UBERON:0007282,1.49e-13,71;UBERON:0004290,1.49e-13,71;UBERON:0009618,1.49e-13,71;UBERON:0002097,3.16e-13,41;UBERON:0003077,3.48e-13,72;UBERON:0007285,3.48e-13,72;UBERON:0000486,1.79e-11,83;UBERON:0007503,3.39e-11,78;UBERON:0001013,4.39e-11,14;UBERON:0004573,4.88e-09,33;UBERON:0004571,4.88e-09,33;UBERON:0002067,1.09e-08,9;UBERON:0004016,1.09e-08,9;UBERON:0010083,1.09e-08,9;UBERON:0001134,1.32e-08,62;UBERON:0002036,1.32e-08,62;UBERON:0003082,1.32e-08,62;UBERON:0004237,1.40e-08,10;UBERON:0004695,1.40e-08,10;UBERON:0002111,1.40e-08,10;UBERON:0004178,1.40e-08,10;UBERON:0002385,4.70e-08,64;UBERON:0001015,4.70e-08,64;UBERON:0000383,4.70e-08,64;UBERON:0001637,5.30e-08,42;UBERON:0003509,5.30e-08,42;UBERON:0004572,5.30e-08,42;UBERON:0000165,1.02e-07,29;UBERON:0000930,1.02e-07,29;UBERON:0002384,1.21e-07,371;UBERON:0001758,2.29e-07,6;UBERON:0003672,2.29e-07,6 | |||
|phase1_expression=3.63356758541113,2.99740733447376,1.9733616573436,1.0007329835313,0.446961094427288,1.74467704820074,2.53299878168311,4.42203911398782,5.22371256399677,0,0,0,0,0.618831764800233,0.331397375727916,6.05092631806598,5.42425075221579,6.57279081348636,8.29485757943862,0,0,0,0.85870796139317,0.958120975510189,0.627713197974014,11.0799438334529,11.2477807546426,9.05173985107311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.895037932904712,1.44575660953827,5.51471701699479,5.21447468258965,0.795285947051099,0.486634870302636,0,0,0.175669571386252,1.63723844372141,0,0,0.324547393654683,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,1.98788780678127,2.91250176828533,3.04541115870403,0.860509862246441,2.12801029319014,3.36406560085384,0,0.49333509683432,3.42332138939743,0.134710672069688,0.653847612453835,0.302714855289863,0.576175924479999,1.64025002283658,3.1216007683032,2.2818872861778,2.98897361103602,3.17073146338165,3.72307772046703,5.05622904128095,6.53293348015658,2.94802361548243,7.33613046347935,9.50402285825643,13.3524141810421,0.910161361938026,0,5.55509176048418,5.63033339423839,7.75779523355712,4.82875382968922,3.0648779579902,12.3195208303409,0.113432183160021,1.61450672119976,7.47450860864986,4.4505699243508,0.600182192168805,2.78241828943785,2.06112432036503,5.58350568994769,4.38818463827292,4.09235421677034,0.252433774244115,3.12969655383818,12.2851003182297,2.13005755509969,1.61203357164224,2.7129694769678,0,0,0,0,0.132529768321485,0,0,0,0,6.25798129319264,5.78916844373597,2.76269842704961,5.57241513638375,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.651616610620649,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.784917590417525,0,1.7601188597028,1.68053230485111,7.15312891703765,4.22651376278,3.72313363218819,0,1.54324424557285,0,1.8649552531127,0,0.542621605391443,0,2.93162565864362,0,1.58390374586686,0.301439377059586,0,0,0,0,0,0.958499421966331,3.44585807502342,0,0.723906533337896,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,0.271265023699736,7.90289273817067,2.85486382075459,4.25796520591624,8.55132329446806,3.31040709700491,2.27407504055985,2.0694614258501,1.99267679560631,1.84369168541703,6.0818530127658,0,0.343143423810856,0,0,0,0,0,0,2.97729369382532,3.22270143904931,2.24528075546459,2.69092213436972,4.60536524160033,0.64341568457443,0,6.01417805830357,5.14929003408069,6.57017248110473,5.19254429183621,1.85936605535935,0,0,0,0.34444334449382,0.364182336013434,1.57349297951309,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0,0,0.824328093181778,0.0915694648183434,0,1.72279661398852,1.95018073810956,1.6068392984416,2.41676795730305,0.308097234229289,0.307007349452259,1.92971201478343,1.6113036730241,1.74020032697074,1.70453254832202,2.22580089116843,0,0,0,0,3.71876439437829,0,5.5762981612848,9.54904098545875,2.12922412126809,3.47973196830029,5.37440235401368,0.858749320451947,0.372158369359667,0.632758849437452,0,0,1.71175595213568,13.0463331649634,2.35484592059769,0.179872457583315,0,0.235624804691373,1.81964233415984,0,0.421258456238981,0,11.4545340126704,1.05650146756755,1.77449884830381,0.282810863907425,6.78048699721457,5.51365343546124,2.65375590096488,0.438450885253763,0.578775534266688,1.31178950409327,0.811641507850816,1.54911749049875,0.563391205064483,0.430234056612155,0.0982490410131212,1.07001315444375,3.90237170477658,4.85547561184627,5.92730807327823,1.13841952129715,2.79947776195986,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.23001529412932,0,0,0,0,0,0,0,0.703347082052564,0,0,0,1.9924798825107,0,0,0,22.8937738157589,1.86623752597084,0,0,0,2.76201535783414,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0.552896299656123,0,0.438770794307945,0,0,4.61701551022782,0.341826167541004,0,0,0,0,2.83952539545773,0,0,0,0,0,0,0,0,0,0,0,0,5.40971599355228,0,0.176915129006678,1.22206028986725,0.296521128680622,0.123563938946503,0,0.404406797884062,1.60515529459758,0.702793337176017,0,0,0,0.789168805698781,0,0,18.1977349330045,0,0,0,0,0,0,0,3.18951747930219,0,0,0,0.698906672968121,0,0,0,0,1.93978032976839,0,4.29363407483012,0,0.397429223405979,0.189932387867636,0,0,0.85381197895741,0,0,0,0,0,0,0,0.67952103036807,0.732219924186332,0,0,0,0.410716136675979,0,0.429765441419957,0,0.837847203816763,0.458320848023367,1.43574604915363,0,0.429226048136571,0.223171457441873,1.34366944973453,1.08089965062721,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.419636705079985,0,0,0,3.57347663186684,0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| ||
|short_description=p9@PRRX1 | |||
}} | }} |
Latest revision as of 14:06, 18 September 2015
Short description: | p9@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRRX1_5end |
Coexpression cluster: | C3903_peripheral_splenic_mesenchymal_neuroectodermal_b_dura_Fibroblast |
Association with transcript: | -138bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.66e-22 | 76 |
skin fibroblast | 1.47e-13 | 23 |
multi fate stem cell | 8.63e-13 | 427 |
somatic stem cell | 4.35e-12 | 433 |
stem cell | 3.43e-11 | 441 |
muscle cell | 9.72e-09 | 55 |
aortic smooth muscle cell | 1.40e-08 | 10 |
vascular associated smooth muscle cell | 2.06e-08 | 32 |
mesenchymal stem cell of adipose | 2.26e-08 | 8 |
muscle precursor cell | 7.56e-08 | 58 |
myoblast | 7.56e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.56e-08 | 58 |
mesenchymal cell | 1.48e-07 | 354 |
connective tissue cell | 1.84e-07 | 361 |
smooth muscle cell | 1.85e-07 | 43 |
smooth muscle myoblast | 1.85e-07 | 43 |
fibroblast of periodontium | 2.29e-07 | 6 |
preadipocyte | 2.45e-07 | 12 |
electrically responsive cell | 4.64e-07 | 61 |
electrically active cell | 4.64e-07 | 61 |
fat cell | 5.12e-07 | 15 |