FFCP PHASE1:Hg19::chr17:80709932..80710027,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:80709932..80710027,+
|short_description=p1@TBCD
|description=CAGE_peak_1_at_TBCD_5end
|association_with_transcript=0bp_to_ENST00000269368,ENST00000334614,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6904 | |EntrezGene=6904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11581 | |HGNC=11581 | ||
|TSSclassifier=strong | |||
|UniProt=A6NE57,F8WC00,Q9BTW9,C9J1U4 | |UniProt=A6NE57,F8WC00,Q9BTW9,C9J1U4 | ||
|association_with_transcript=0bp_to_ENST00000269368,ENST00000334614,ENST00000355528,ENST00000397466,ENST00000536182,ENST00000539345,NM_005993,uc002kfx.1,uc002kfy.1,uc002kfz.2_5end | |||
|cluster_id=chr17:80709932..80710027,+ | |||
|description=CAGE_peak_1_at_TBCD_5end | |||
|id=chr17:80709932..80710027,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.93e-15!180;CL:0002321!1.51e-13!248;CL:0000220!6.77e-13!246;CL:0000221!1.70e-09!71;CL:0000333!2.13e-09!41;CL:1000449!8.60e-09!16;CL:0000133!9.74e-09!59;CL:0000222!1.01e-07!119;CL:0000183!1.19e-07!59;CL:0000393!3.09e-07!60;CL:0000211!3.09e-07!60;CL:1000507!3.64e-07!12;CL:1000494!3.64e-07!12;CL:0002681!3.98e-07!13;CL:0002584!3.98e-07!13;CL:0002319!4.63e-07!25;CL:1000497!5.25e-07!18;CL:0002518!5.25e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.23e-09;15!CL:0002681;3.45e-07;12!CL:0002584;3.45e-07;12!CL:0002319;4.62e-07;25!CL:1000497;5.64e-07;17!CL:0002518;5.64e-07;17!CL:1000507;6.54e-07;10!CL:1000494;6.54e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.13e-14,250;CL:0000221,1.06e-09,72;CL:0000333,2.13e-09,41;CL:1000449,7.46e-09,15;CL:0000133,9.74e-09,59;CL:0000222,4.60e-08,121;CL:0000393,2.48e-07,61;CL:0000211,2.48e-07,61;CL:0002681,3.54e-07,12;CL:0002584,3.54e-07,12;CL:0002319,4.63e-07,25;CL:1000497,5.50e-07,17;CL:0002518,5.50e-07,17;CL:1000507,6.80e-07,10;CL:1000494,6.80e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.51e-22!312;UBERON:0000483!3.57e-21!309;UBERON:0000475!5.56e-19!365;UBERON:0000073!1.13e-18!94;UBERON:0001016!1.13e-18!94;UBERON:0005743!1.85e-18!86;UBERON:0001017!4.14e-17!82;UBERON:0000924!5.65e-17!173;UBERON:0006601!5.65e-17!173;UBERON:0000025!6.89e-17!194;UBERON:0004121!7.29e-17!169;UBERON:0003075!9.31e-16!86;UBERON:0007284!9.31e-16!86;UBERON:0002346!1.12e-15!90;UBERON:0000955!6.06e-15!69;UBERON:0006238!6.06e-15!69;UBERON:0003056!7.92e-14!61;UBERON:0001049!2.42e-13!57;UBERON:0005068!2.42e-13!57;UBERON:0006241!2.42e-13!57;UBERON:0007135!2.42e-13!57;UBERON:0002616!1.45e-12!59;UBERON:0000477!1.66e-12!286;UBERON:0000481!3.78e-12!347;UBERON:0000033!7.14e-12!123;UBERON:0000064!1.97e-11!219;UBERON:0001869!3.20e-11!32;UBERON:0004111!3.43e-11!241;UBERON:0000153!6.27e-11!129;UBERON:0007811!6.27e-11!129;UBERON:0001893!9.65e-11!34;UBERON:0002780!9.66e-11!41;UBERON:0001890!9.66e-11!41;UBERON:0006240!9.66e-11!41;UBERON:0002791!1.88e-10!33;UBERON:0002020!2.96e-10!34;UBERON:0003528!2.96e-10!34;UBERON:0003080!3.73e-10!42;UBERON:0000956!1.24e-09!25;UBERON:0000203!1.24e-09!25;UBERON:0004211!8.60e-09!16;UBERON:0001285!8.60e-09!16;UBERON:0007684!8.60e-09!16;UBERON:0003220!8.60e-09!16;UBERON:0004208!8.60e-09!16;UBERON:0006555!2.47e-08!17;UBERON:0005103!2.47e-08!17;UBERON:0000083!2.47e-08!17;UBERON:0009201!2.47e-08!17;UBERON:0004819!2.47e-08!17;UBERON:0006553!2.47e-08!17;UBERON:0003074!2.47e-08!17;UBERON:0003060!2.47e-08!17;UBERON:0002619!3.50e-08!22;UBERON:0001950!1.16e-07!20;UBERON:0000080!1.33e-07!18;UBERON:0002120!1.33e-07!18;UBERON:0004875!1.33e-07!18;UBERON:0005721!1.33e-07!18;UBERON:0005754!1.33e-07!18;UBERON:0007297!1.33e-07!18;UBERON:0000353!2.17e-07!17;UBERON:0003914!2.19e-07!118;UBERON:0009773!3.64e-07!12;UBERON:0001231!3.64e-07!12;UBERON:0004810!3.64e-07!12;UBERON:0001225!3.98e-07!13;UBERON:0008987!3.98e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.19e-10;32!UBERON:0002791;9.22e-10;32!UBERON:0001893;1.08e-09;34!UBERON:0000956;1.09e-09;25!UBERON:0000203;1.09e-09;25!UBERON:0003528;1.72e-09;34!UBERON:0002020;1.72e-09;34!UBERON:0006555;7.23e-09;15!UBERON:0004819;7.23e-09;15!UBERON:0001285;7.23e-09;15!UBERON:0007684;7.23e-09;15!UBERON:0002780;2.85e-08;41!UBERON:0001890;2.85e-08;41!UBERON:0000073;3.05e-08;53!UBERON:0002616;3.05e-08;53!UBERON:0002619;3.13e-08;22!UBERON:0000955;5.38e-08;68!UBERON:0000353;1.02e-07;15!UBERON:0001950;1.06e-07;20!UBERON:0001016;2.97e-07;83!UBERON:0001225;3.45e-07;12!UBERON:0008987;3.45e-07;12!UBERON:0001017;4.51e-07;75!UBERON:0004211;6.54e-07;10!UBERON:0009773;6.54e-07;10!UBERON:0001231;6.54e-07;10!UBERON:0004810;6.54e-07;10!UBERON:0002113;7.97e-07;24!UBERON:0011143;7.97e-07;24 | |||
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| ||
|short_description=p1@TBCD | |||
}} | }} |
Latest revision as of 14:00, 18 September 2015
Short description: | p1@TBCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBCD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000269368, ENST00000334614, ENST00000355528, ENST00000397466, ENST00000536182, ENST00000539345, NM_005993, uc002kfx.1, uc002kfy.1, uc002kfz.2_5end |
EntrezGene: | TBCD |
HGNC: | 11581 |
UniProt: | A6NE57F8WC00Q9BTW9C9J1U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.13e-14 | 250 |
ectodermal cell | 1.06e-09 | 72 |
migratory neural crest cell | 2.13e-09 | 41 |
epithelial cell of nephron | 7.46e-09 | 15 |
neurectodermal cell | 9.74e-09 | 59 |
mesodermal cell | 4.60e-08 | 121 |
electrically responsive cell | 2.48e-07 | 61 |
electrically active cell | 2.48e-07 | 61 |
kidney cortical cell | 3.54e-07 | 12 |
renal cortical epithelial cell | 3.54e-07 | 12 |
neural cell | 4.63e-07 | 25 |
kidney cell | 5.50e-07 | 17 |
kidney epithelial cell | 5.50e-07 | 17 |
kidney tubule cell | 6.80e-07 | 10 |
nephron tubule epithelial cell | 6.80e-07 | 10 |