FFCP PHASE1:Hg19::chr2:79252822..79252833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29595 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UW15 | |||
|association_with_transcript=0bp_to_ENST00000272324,NM_001008387,NM_198448,uc002snw.2,uc002snx.2,uc010ffu.2_5end | |||
|cluster_id=chr2:79252822..79252833,+ | |||
|coexpression_cluster_id=C643 | |||
|description=CAGE_peak_3_at_REG3G_5end | |||
|id=chr2:79252822..79252833,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.84e-14;10!UBERON:0005564;3.84e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002108!1.52e-11!14;UBERON:0000473!4.84e-10!8;UBERON:0005409!2.35e-08!35;UBERON:0003135!1.51e-07!11;UBERON:0002240!2.63e-07!3;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.10e-17;8!UBERON:0003135;5.93e-13;11!UBERON:0002114;2.31e-12;2!UBERON:0002108;6.13e-08;4!UBERON:0000991;3.00e-07;21!UBERON:0003101;5.82e-07;22!UBERON:0000079;5.82e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.19e-17,8;UBERON:0003135,6.11e-13,11;UBERON:0002114,2.31e-12,2;UBERON:0002108,6.13e-08,4;UBERON:0000991,3.05e-07,21;UBERON:0009196,3.05e-07,21;UBERON:0009117,3.05e-07,21;UBERON:0005564,3.05e-07,21;UBERON:0002323,3.48e-07,46;UBERON:0004176,5.91e-07,22;UBERON:0003101,5.91e-07,22;UBERON:0000079,5.91e-07,22;UBERON:0004458,8.74e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.3232227155246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49730843868477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.395064853715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,36.5028519955626,0,0,0,0,0,0,0,0,0,0,4.24360710022141,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@REG3G | |||
}} |
Latest revision as of 13:43, 18 September 2015
Short description: | p3@REG3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_REG3G_5end |
Coexpression cluster: | C643_duodenum_temporal_pancreas_stomach_mesothelioma_small_amygdala |
Association with transcript: | 0bp_to_ENST00000272324, NM_001008387, NM_198448, uc002snw.2, uc002snx.2, uc010ffu.2_5end |
EntrezGene: | REG3G |
HGNC: | 29595 |
UniProt: | Q6UW15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.19e-17 | 8 |
male reproductive organ | 6.11e-13 | 11 |
duodenum | 2.31e-12 | 2 |
small intestine | 6.13e-08 | 4 |
gonad | 3.05e-07 | 21 |
indifferent external genitalia | 3.05e-07 | 21 |
indifferent gonad | 3.05e-07 | 21 |
gonad primordium | 3.05e-07 | 21 |
body cavity | 3.48e-07 | 46 |
external genitalia | 5.91e-07 | 22 |
male organism | 5.91e-07 | 22 |
male reproductive system | 5.91e-07 | 22 |
body cavity or lining | 8.74e-07 | 49 |