FFCP PHASE1:Hg19::chr11:60223277..60223297,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=931 | |EntrezGene=931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7315 | |HGNC=7315 | ||
|TSSclassifier=strong | |||
|UniProt=P11836 | |UniProt=P11836 | ||
|association_with_transcript=0bp_to_ENST00000345732,NM_021950,NM_152866,uc001npp.2,uc001npq.2,uc009ymy.1,uc009ymz.2,uc009yna.2,uc010rlc.1_5end | |association_with_transcript=0bp_to_ENST00000345732,NM_021950,NM_152866,uc001npp.2,uc001npq.2,uc009ymy.1,uc009ymz.2,uc009yna.2,uc010rlc.1_5end | ||
|cluster_id=chr11:60223277..60223297,+ | |||
|coexpression_cluster_id=C651 | |coexpression_cluster_id=C651 | ||
|description=CAGE_peak_2_at_MS4A1_5end | |description=CAGE_peak_2_at_MS4A1_5end | ||
|id=chr11:60223277..60223297,+ | |id=chr11:60223277..60223297,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.39e-40!24;CL:0000826!4.39e-40!24;CL:0000542!1.55e-34!53;CL:0000051!1.55e-34!53;CL:0000838!4.66e-33!52;CL:0002087!8.30e-30!119;CL:0000738!2.15e-26!140;CL:0002031!1.20e-22!124;CL:0000236!1.66e-22!14;CL:0000037!2.83e-19!172;CL:0000566!2.83e-19!172;CL:0000988!2.63e-17!182;CL:0002032!5.23e-16!165;CL:0000837!5.23e-16!165;CL:0000625!3.01e-13!11;CL:0000791!9.27e-09!18;CL:0000789!9.27e-09!18;CL:0002420!9.27e-09!18;CL:0002419!9.27e-09!18;CL:0000790!9.27e-09!18 | |ontology_enrichment_celltype=CL:0000945!4.39e-40!24;CL:0000826!4.39e-40!24;CL:0000542!1.55e-34!53;CL:0000051!1.55e-34!53;CL:0000838!4.66e-33!52;CL:0002087!8.30e-30!119;CL:0000738!2.15e-26!140;CL:0002031!1.20e-22!124;CL:0000236!1.66e-22!14;CL:0000037!2.83e-19!172;CL:0000566!2.83e-19!172;CL:0000988!2.63e-17!182;CL:0002032!5.23e-16!165;CL:0000837!5.23e-16!165;CL:0000625!3.01e-13!11;CL:0000791!9.27e-09!18;CL:0000789!9.27e-09!18;CL:0002420!9.27e-09!18;CL:0002419!9.27e-09!18;CL:0000790!9.27e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.56e-74;24!CL:0000236;8.78e-38;13!CL:0000542;4.63e-25;53!CL:0000226;2.76e-10;3!CL:0000842;2.76e-10;3!CL:0002087;8.53e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.56e-74,24;CL:0000826,2.56e-74,24;CL:0000542,6.39e-42,53;CL:0000051,6.39e-42,53;CL:0000236,3.26e-41,14;CL:0000838,1.64e-39,52;CL:0002087,3.76e-24,115;CL:0000738,1.60e-20,136;CL:0002031,8.83e-17,120;CL:0000037,5.17e-15,168;CL:0000988,7.92e-14,177;CL:0002032,1.07e-12,161;CL:0000837,1.07e-12,161;CL:0000226,2.81e-10,3;CL:0000842,2.81e-10,3;CL:0000785,3.56e-08,2;CL:0000955,3.56e-08,2;CL:0000818,3.56e-08,2;CL:0000954,3.56e-08,2;CL:0000816,3.56e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;4.63e-25;53!UBERON:0004872;3.38e-08;7!CL:0000954;3.56e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!9.33e-07!10 | |ontology_enrichment_disease=DOID:0060058!9.33e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.45e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.45e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.15e-15!15;UBERON:0000179!1.15e-15!15;UBERON:0000463!1.15e-15!15;UBERON:0007023!2.87e-13!115;UBERON:0002390!1.87e-11!102;UBERON:0003061!1.87e-11!102;UBERON:0002193!2.52e-11!112;UBERON:0004177!8.85e-07!7;UBERON:0002106!9.41e-07!3;UBERON:0004854!9.41e-07!3;UBERON:0009034!9.41e-07!3;UBERON:0002095!9.41e-07!3;UBERON:0004782!9.41e-07!3;UBERON:0003281!9.41e-07!3;UBERON:0009664!9.41e-07!3;UBERON:0002296!9.41e-07!3;UBERON:0005602!9.41e-07!3;UBERON:0001179!9.41e-07!3;UBERON:0006293!9.41e-07!3 | |ontology_enrichment_uberon=UBERON:0000178!1.15e-15!15;UBERON:0000179!1.15e-15!15;UBERON:0000463!1.15e-15!15;UBERON:0007023!2.87e-13!115;UBERON:0002390!1.87e-11!102;UBERON:0003061!1.87e-11!102;UBERON:0002193!2.52e-11!112;UBERON:0004177!8.85e-07!7;UBERON:0002106!9.41e-07!3;UBERON:0004854!9.41e-07!3;UBERON:0009034!9.41e-07!3;UBERON:0002095!9.41e-07!3;UBERON:0004782!9.41e-07!3;UBERON:0003281!9.41e-07!3;UBERON:0009664!9.41e-07!3;UBERON:0002296!9.41e-07!3;UBERON:0005602!9.41e-07!3;UBERON:0001179!9.41e-07!3;UBERON:0006293!9.41e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.89e-29;15!UBERON:0000179;5.89e-29;15!UBERON:0000463;5.89e-29;15!UBERON:0002390;2.00e-26;32!UBERON:0002193;2.71e-18;42!UBERON:0004177;7.17e-17;5!UBERON:0005057;7.17e-17;5!UBERON:0002106;2.92e-11;3!UBERON:0002370;2.54e-07;2!UBERON:0005058;2.54e-07;2!UBERON:0009113;2.54e-07;2!UBERON:0001829;3.52e-07;2!UBERON:0002405;9.57e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.60e-29,15;UBERON:0000179,5.60e-29,15;UBERON:0000463,5.60e-29,15;UBERON:0004177,6.02e-12,7;UBERON:0005057,6.02e-12,7;UBERON:0002106,2.87e-11,3;UBERON:0004854,2.87e-11,3;UBERON:0009034,2.87e-11,3;UBERON:0002095,2.87e-11,3;UBERON:0004782,2.87e-11,3;UBERON:0003281,2.87e-11,3;UBERON:0009664,2.87e-11,3;UBERON:0002296,2.87e-11,3;UBERON:0005602,2.87e-11,3;UBERON:0001179,2.87e-11,3;UBERON:0006293,2.87e-11,3;UBERON:0002193,3.92e-10,108;UBERON:0002390,2.33e-09,98;UBERON:0003061,2.33e-09,98;UBERON:0001829,3.09e-07,2 | |||
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|short_description=p2@MS4A1 | |short_description=p2@MS4A1 | ||
}} | }} |
Latest revision as of 13:38, 18 September 2015
Short description: | p2@MS4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MS4A1_5end |
Coexpression cluster: | C651_splenic_CD19_B_xeroderma_plasma_Burkitt_lymphoma |
Association with transcript: | 0bp_to_ENST00000345732, NM_021950, NM_152866, uc001npp.2, uc001npq.2, uc009ymy.1, uc009ymz.2, uc009yna.2, uc010rlc.1_5end |
EntrezGene: | MS4A1 |
HGNC: | 7315 |
UniProt: | P11836 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.56e-74 | 24 |
pro-B cell | 2.56e-74 | 24 |
lymphocyte | 6.39e-42 | 53 |
common lymphoid progenitor | 6.39e-42 | 53 |
B cell | 3.26e-41 | 14 |
lymphoid lineage restricted progenitor cell | 1.64e-39 | 52 |
nongranular leukocyte | 3.76e-24 | 115 |
leukocyte | 1.60e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 8.83e-17 | 120 |
hematopoietic stem cell | 5.17e-15 | 168 |
hematopoietic cell | 7.92e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.07e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-12 | 161 |
single nucleate cell | 2.81e-10 | 3 |
mononuclear cell | 2.81e-10 | 3 |
mature B cell | 3.56e-08 | 2 |
pre-B-II cell | 3.56e-08 | 2 |
transitional stage B cell | 3.56e-08 | 2 |
small pre-B-II cell | 3.56e-08 | 2 |
immature B cell | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.60e-29 | 15 |
haemolymphatic fluid | 5.60e-29 | 15 |
organism substance | 5.60e-29 | 15 |
hemopoietic organ | 6.02e-12 | 7 |
immune organ | 6.02e-12 | 7 |
spleen | 2.87e-11 | 3 |
gastrointestinal system mesentery | 2.87e-11 | 3 |
stomach region | 2.87e-11 | 3 |
mesentery | 2.87e-11 | 3 |
gastrointestinal system serosa | 2.87e-11 | 3 |
mesentery of stomach | 2.87e-11 | 3 |
gut mesentery | 2.87e-11 | 3 |
dorsal mesentery | 2.87e-11 | 3 |
dorsal mesogastrium | 2.87e-11 | 3 |
peritoneal cavity | 2.87e-11 | 3 |
spleen primordium | 2.87e-11 | 3 |
hemolymphoid system | 3.92e-10 | 108 |
hematopoietic system | 2.33e-09 | 98 |
blood island | 2.33e-09 | 98 |
major salivary gland | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.45e-12 | 10 |