FFCP PHASE1:Hg19::chr7:39663923..39663926,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9839 | |||
|TSSclassifier=strong | |||
|UniProt=C9JPE8 | |||
|association_with_transcript=438bp_to_ENST00000436179_5end | |||
|cluster_id=chr7:39663923..39663926,+ | |||
|description=CAGE_peak_4_at_RALA_5end | |||
|id=chr7:39663923..39663926,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.49e-16!42;CL:0000860!5.33e-15!45;CL:0002009!9.79e-12!65;CL:0002194!1.03e-10!63;CL:0000576!1.03e-10!63;CL:0000040!1.03e-10!63;CL:0000559!1.03e-10!63;CL:0002139!2.28e-10!24;CL:0000557!2.33e-10!71;CL:0000048!1.43e-09!430;CL:0000738!1.66e-09!140;CL:0000034!2.07e-09!444;CL:0000723!2.49e-09!436;CL:0000839!3.55e-09!70;CL:0000766!7.43e-09!76;CL:0002087!1.91e-08!119;CL:0000003!1.92e-08!722;CL:0002371!2.90e-08!591;CL:0002031!4.38e-08!124;CL:0000144!5.80e-08!625;CL:0000071!3.00e-07!18;CL:0002546!3.00e-07!18;CL:0000115!6.98e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-19;33!CL:0002057;1.22e-19;33!CL:0000473;2.51e-17;39!CL:0000234;2.51e-17;39!CL:0002139;1.08e-16;24!CL:0000576;3.38e-12;48!CL:0000071;9.29e-12;18!CL:0000115;1.55e-10;36!CL:1000413;8.71e-09;9!CL:0000766;4.51e-07;69!CL:0002544;9.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.22e-22,48;CL:0000234,7.22e-22,48;CL:0000860,3.77e-21,42;CL:0002057,3.77e-21,42;CL:0002009,3.41e-19,61;CL:0002194,1.62e-17,59;CL:0000576,1.62e-17,59;CL:0000040,1.62e-17,59;CL:0000559,1.62e-17,59;CL:0000557,6.76e-17,67;CL:0002139,1.32e-16,24;CL:0000048,8.33e-16,427;CL:0000723,2.23e-15,433;CL:0000034,2.31e-15,441;CL:0000738,5.49e-15,136;CL:0000839,6.84e-15,66;CL:0000766,3.51e-14,72;CL:0002087,4.60e-14,115;CL:0002031,1.68e-13,120;CL:0000115,7.76e-12,36;CL:0000071,1.03e-11,18;CL:0002546,1.03e-11,18;CL:0000134,1.08e-09,354;CL:0002320,7.06e-09,361;CL:1000413,1.17e-08,9;CL:0000037,2.94e-08,168;CL:0000222,3.67e-08,121;CL:0002078,9.28e-08,45;CL:0002032,2.36e-07,161;CL:0000837,2.36e-07,161;CL:0000763,2.60e-07,108;CL:0000049,2.60e-07,108;CL:0000219,5.60e-07,386;CL:0000988,6.14e-07,177;CL:0002539,6.17e-07,10;CL:0000359,9.84e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-16;42!CL:0002546;9.29e-12;18 | |||
|ontology_enrichment_disease=DOID:2394!1.09e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.01e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.37e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!4.44e-11!69;UBERON:0001637!7.18e-11!42;UBERON:0003509!7.18e-11!42;UBERON:0004572!7.18e-11!42;UBERON:0003081!1.67e-10!216;UBERON:0004535!2.43e-10!110;UBERON:0004573!2.85e-10!33;UBERON:0004571!2.85e-10!33;UBERON:0002049!3.05e-10!79;UBERON:0007798!3.05e-10!79;UBERON:0002204!4.22e-10!167;UBERON:0001981!7.04e-10!60;UBERON:0007500!7.04e-10!60;UBERON:0004537!7.04e-10!60;UBERON:0006965!7.04e-10!60;UBERON:0004872!2.78e-09!84;UBERON:0001009!4.20e-09!113;UBERON:0000947!2.72e-08!21;UBERON:0010191!2.72e-08!21;UBERON:0002371!6.12e-08!80;UBERON:0002193!6.17e-08!112;UBERON:0001474!6.80e-08!86;UBERON:0004765!1.82e-07!101;UBERON:0001434!1.82e-07!101;UBERON:0001986!3.00e-07!18;UBERON:0004638!3.00e-07!18;UBERON:0004852!3.00e-07!18;UBERON:0002390!6.53e-07!102;UBERON:0003061!6.53e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.18e-14;33!UBERON:0004571;6.18e-14;33!UBERON:0001637;1.63e-13;42!UBERON:0003509;1.63e-13;42!UBERON:0004572;1.63e-13;42!UBERON:0000947;3.50e-13;21!UBERON:0010191;3.50e-13;21!UBERON:0004638;9.29e-12;18!UBERON:0001986;9.29e-12;18!UBERON:0004852;9.29e-12;18!UBERON:0000055;1.57e-11;65!UBERON:0007500;3.65e-10;56!UBERON:0001981;3.65e-10;56!UBERON:0004537;3.65e-10;56!UBERON:0000487;1.25e-09;22!UBERON:0003915;8.71e-09;9!UBERON:0004700;8.71e-09;9!UBERON:0001917;8.71e-09;9!UBERON:0002049;5.96e-08;75!UBERON:0007798;5.96e-08;75!UBERON:0006914;8.69e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.55e-23,203;UBERON:0000055,6.12e-20,68;UBERON:0002049,1.26e-17,78;UBERON:0007798,1.26e-17,78;UBERON:0007500,2.42e-17,59;UBERON:0001981,2.42e-17,59;UBERON:0004537,2.42e-17,59;UBERON:0006965,2.42e-17,59;UBERON:0001637,1.26e-16,42;UBERON:0003509,1.26e-16,42;UBERON:0004572,1.26e-16,42;UBERON:0002405,1.35e-16,93;UBERON:0004872,2.82e-16,83;UBERON:0004535,2.83e-16,109;UBERON:0000926,1.53e-15,315;UBERON:0004120,1.53e-15,315;UBERON:0006603,1.53e-15,315;UBERON:0001009,2.73e-15,112;UBERON:0004573,4.29e-15,33;UBERON:0004571,4.29e-15,33;UBERON:0002204,3.89e-14,167;UBERON:0002371,6.46e-14,76;UBERON:0002193,8.64e-14,108;UBERON:0000947,2.56e-13,21;UBERON:0010191,2.56e-13,21;UBERON:0001474,5.26e-13,82;UBERON:0004765,6.48e-13,90;UBERON:0001434,9.39e-12,100;UBERON:0004638,1.03e-11,18;UBERON:0001986,1.03e-11,18;UBERON:0004852,1.03e-11,18;UBERON:0002390,3.56e-11,98;UBERON:0003061,3.56e-11,98;UBERON:0000487,1.42e-09,22;UBERON:0003915,1.17e-08,9;UBERON:0004700,1.17e-08,9;UBERON:0001917,1.17e-08,9;UBERON:0002384,4.72e-08,371;UBERON:0003914,9.56e-08,117;UBERON:0006914,9.61e-08,25;UBERON:0004237,6.17e-07,10;UBERON:0004695,6.17e-07,10;UBERON:0002111,6.17e-07,10;UBERON:0004178,6.17e-07,10 | |||
|phase1_expression=0.908391896352783,1.92690471501885,1.26858963686374,0,0,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.436882744260345,0.263766978228454,0,0,5.3786011716142,4.21886169616784,2.92124036154949,5.36726078669558,0.246242116153576,0,0,0,0,0.376627918784408,1.22261449196722,1.23150884174919,0.472264687882075,0.393364276848904,1.53531759238885,3.09632246632152,0,0,0.369754010166788,0.154934401160603,0.568676929949686,0,7.75593571944628,7.2196001089251,3.68918480216948,0.671746422719773,1.6194683300949,1.28787783817093,3.19876125315042,4.1566353805769,2.91100873425379,5.11343881192506,3.70051099219643,7.43295290148249,12.9461576544968,14.0888388591005,4.96612682766029,1.37898272294647,2.5819387343353,8.12558919566051,4.70605848856512,5.45812300115692,2.69668181334102,1.53041946185451,0.320929027076094,3.19668562899521,6.26717470354761,12.1672831149195,5.54092175692502,3.19230162491442,1.70215567407342,1.24564449799115,17.0849092374585,10.429658368404,6.95004303056373,3.02699751316684,1.10483290796269,1.58231193720442,0.422510572623884,1.70083439972035,0.628975936525128,2.02191536063691,0.750884464207532,0.32145117339416,1.14005097496499,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,2.84606484554724,3.52342313622563,2.29363936875137,2.64342657158052,4.48406850385229,0,5.90129310341499,4.32311839024081,0.616804496998528,1.00311897234407,1.30368906653436,1.4203434172042,1.94826728407911,0.222820913770347,1.47302953737419,0.886135578334485,0,0.640456598628376,0.910415432919148,0.822189523018381,0.552700035571697,0.579606171470105,1.4828656316206,1.60524496853828,1.04535523804977,0.339928028092699,2.29932296161153,1.37450978193052,0.253019692019503,0,0.651083453856419,0,1.35517607169996,0.127986611154418,1.24930726552346,0.473554504088034,0,3.22570789159572,4.27904313253612,2.31719046212478,0,0.670700859703636,1.15076305659177,0,1.50401373190767,0,0,0.973269740605272,0.661743720148475,1.33037638477538,0.527008714158756,0.72038491523742,0.364295288292542,0.741568885568859,0.324547393654683,0,0,2.62339686735876,4.0039643754609,4.45749001595478,4.17401055470081,6.02164216574287,3.81854551768354,3.39184765154406,3.77549492588915,2.20094433552054,2.08994966536811,3.10100111003195,3.5576626268671,3.68192674041137,6.0424397566372,1.52054421143703,4.88124115096339,4.04429388380456,4.0507097394088,4.64358587077215,3.59246996201872,2.25222960966644,0,0,3.11442964681692,0,0,0,0,1.51956613997496,17.4780118673449,4.58938593198102,1.06400514659507,0.560677600142307,1.06748995729705,1.72667283892012,2.17847724779836,6.7355336034844,5.39424280274414,0.151357427644931,1.72852777344,1.17160715916898,0.312160076830321,0.570471821544449,1.19558944441441,1.64408298101271,0.971237666208789,1.40450806702248,0.61246251376468,0.859840221182376,0.723280468230358,0,0.494533858557114,0,0,0.505008341862199,1.12606667884768,1.10825646193673,0.438977620880838,1.83892677479412,0.45071417671979,1.70148274740032,1.61450672119976,0.427114777637135,0.635795703478686,1.80054657650641,1.03052529238439,1.54584324027377,0.18611685633159,3.03797398034279,0.487185025805993,2.01947019395292,0.736399189138395,1.13152239773168,0.355009592516614,0.403008392910561,0.169560592310488,4.83152132908242,2.72746120590835,0.860413786167011,0.243947412259191,0.530119073285941,0.232387885739037,0.518305275076852,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,0.441463099414651,0.860919069801795,0.171567810298526,0.768251997860379,0,0,0.462942225792648,1.62904152655162,0,0,0.115930404975077,0.117408694235822,3.3204282985047,5.55582615091933,6.65889532821094,1.58040879591855,0.858486162094873,1.23108503043699,3.97807250736704,0.297262324577456,5.62403003920662,3.69560682037491,1.70130116690864,1.16426079513703,0.871901815541886,0.383382679165211,0,0.352193736052904,1.24396869324463,0.432359860250884,0.50496973370552,0.507983154337352,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0.560655421726804,0.43596006883328,0.4400297149257,2.45616259939778,3.57656445851882,0,1.06375246633948,0,0.257207374262142,0,0,0.428933980974443,0,0,0.977208552881205,0,0,2.1100756394171,3.48613383440118,0.799783929456456,0,2.00902836572851,2.10833939483032,0,0,0,1.44781306667579,1.02738161275192,0.537182889719687,0.224170287987055,3.74358444383662,1.72502059887614,2.43851768931522,0,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0,0,1.24782516918484,0.713715955188647,1.26161932027148,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.521301686808497,0,0,2.06768026122887,3.66714141391649,0.640365346820666,0,0,0,2.72918588600655,2.30192959932094,1.96462066103151,3.33161788064823,0,0.160853921143607,0,0.308419387605311,0.355123450626254,0.574890092096664,1.03850885836724,0.464841513839837,0.725156697549733,1.00253235151642,0.644566922551274,0.803701137152247,0.182091168006717,0.131124414959424,0.451199612907412,0.462092022626489,0.784349769176855,0,0.422206515571503,0,1.36074964221213,1.0795795805107,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0.512900250232778,0.656029291399411,0.650756789328606,0.721287081534056,0.0915694648183434,0.495056999523528,0.574265537996172,1.30012049207304,0,0.773365746336976,0.924291702687866,0.307007349452259,0.827019434907183,1.07420244868274,1.59518363305651,0.767039646744908,0.712256285173899,0.165284915360978,0.576570202095319,5.10450849978336,0.4046311234222,0,2.51849877464512,1.3940745403212,2.7723022215848,3.72614221221915,1.73986598415015,1.48259375283136,2.00374841438788,0.744316738719335,0,1.14378116354295,0.767693373934002,1.71175595213568,0.95460974377781,0.78494864019923,2.15846949099978,0.823611089208164,0.471249609382746,3.03273722359974,3.17020642346017,1.68503382495592,0.48763373908959,1.21856744815642,1.05650146756755,0.545999645631943,0.282810863907425,0,0,1.32687795048244,1.75380354101505,0.578775534266688,0,2.23201414658974,0,0.563391205064483,0.286822704408103,0.0982490410131212,2.49669736036875,1.06428319221179,0,0,0,0.699869440489966,0.48111056362756,0,0,0.470719003883896,0.86101074534246,0,0.886860307073351,1.60806380144872,1.01489521846434,0,0,0.952927101831156,0.822724546172388,0.648473311192717,0,0,0.213648142254946,0,0.490080431962063,0,0.144269212976445,0.284567373393656,0,0.399158742865633,0.5745161103971,0.423347165447766,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0.677167111206413,0,0.403599414382095,0,0,0,0,0,0.390776190804081,0,0,0.540911356951966,0,0,0,0,0,0.111443384277478,0.284136146806413,0.71623345421307,0.296964680832639,0.307160702099232,0,1.1253553312841,0.556543525114529,0.16480387422676,0.211125408127993,0,0.552567831062295,0.755798243562828,0.20453736500431,1.10776324914963,0.622079175323615,0.629078458031288,0.358042349351218,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0.437299999980979,0,0,1.27126825146383,0.472775363535873,1.03423011972439,0,0.347249989866585,0,1.20596438625408,1.52581736317083,1.43753037910592,1.18219047581419,0,0.544692317594951,0.41827123283581,0.230850775511391,0.91153644677601,0.23056390438806,0.269272933229316,0.217294743844016,0,0.549585560411174,0,0,0.156980256395025,0,0.225595660617181,0,0.503464760927528,0,0.158936578980379,0,0.326465616318295,0.282706142867882,1.08194319871046,0,0.176915129006678,0,0.593042257361244,0.123563938946503,0.417687798021821,0.808813595768125,0,0.234264445725339,0.364909578431332,0,0.242780379534093,0.789168805698781,0,1.53036380815245,1.01098527405581,0.450970258243478,0.207376382794494,0,0,0,0,0.569219092059585,0,0,0.293977192243133,0.261177619741208,0.34945333648406,0.343972064943233,0.387025325156341,0.219267951258557,0.410577285266046,0.581934098930517,1.1473296469895,0,0.137041924646751,0.19871461170299,0.823040347426423,0,0.160317640503067,0.213452994739353,0,0.72045208577053,0.458146384663663,0.171594997861965,2.16082196982225,0.372757606696298,0,0.407712618220842,0.523014231561666,0.509991088181609,0,0,0.684526894459965,0,0.429765441419957,0.262887354279314,0.279282401272254,1.14580212005842,0,0,0,0,0.739018197353989,0,0,0.315132729228895,0.164831716762333,0.26961417541674,0.78741985211799,0,0,0.408610218334727,0.482259445395058,0.687697182986169,0.415440338029185,8.09906009585402,17.7974449548328,0.789744236554321,0.335434687599266,0.0788057072991982,0.262272940674991,0.105600336519406,0.537862017998534,0.383830394638891,0,0,0.25426853765475,2.17199840701485,1.72844298240254,0,0,0.246277562248017,1.02232813071253,0.226624183040251,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.533937062838473,0.78602152549833,1.24271716604159,0,0.395223263795889,0.243585196761792,0,0,0,0.306345576763462,1.31149052283922,0.157054096250234,0,0.366078794705889,1.1267183763585,0,0.776503360757966,0.496771223531068,0.138348634936231,0,1.36484205787483,1.14186133417987,0.941063278792687,1.40500471742064,0.28984205722165,1.49254802886874,4.20683957725004,4.99325275352352,0.378806010550178,0.251567901752575,1.77962244319307,6.17868184671694,1.96600200892211,0.932623203496683,4.28779934969938,4.93819978207477,4.49803112163605,4.81315166316404,2.07353103920428,7.97525143673985,3.65221543268214,1.6528336989694,2.28483127301277,5.2893195316606,1.81848659202559,5.80017008029438,4.64033759878494,5.57334244178062,0,1.03018711554838,0.336749488765919,0,0.385239660814607,0,0,1.58694147858591,0.231522474323834,0.244736704506468,0.71635536432595,0.308801447160972,0.219284049578707,0.176689145945881,0.578742114812744,0.168942440653073,0.512483037175893,0,0.303859956177382,0.967809053062115,0.974301544196942,3.98594520940089,1.4720885483026,0.327609848846413,0,0,0.39997479170986,0.213383459388282,0.344429959321631,0,1.10463570151104,0.839277046316667,0,0.255788742607303,0.431299245586727,0.157265941855896,0.655257829152084,0.169732529954025,0.212574920101683,0,0.558644917973244,0,0.70975570501128,0,1.05802783107205,0.6124909547064,0.770750701157514,0,0.638535436228605,0.615349092722265,0.252071696221718,0.829887029570615,0.484426936895553,1.42769420259154,0.588886311006154,0,0,0.462102664601353,0.381382095467167,0.690359926060101,0.397832444232549,0.150420656698515,0.20170506870352,0.781514011233092,0,0.163771917510097,0.591424344868181,0.675375846183947,0,0.413373593002368,0.570742291745161,0,1.09651553371436,0.496211178389294,0.175871244359621,0.127762427639595,0,1.68141861109412,0.606965604236632,1.59363533945908,0.709618961301111,0.115233987555779,0.857440047187092,0.40781839786099,0.920818829879887,0.354581522651905,0.111231401892069,0.156986185701028,0.942693539496011,0.280272163313789,0,0.647782773655864,1.43325506366115,1.07214816264985,1.26410889386181,0,0,0,0.414432328326074,0.6828739083758,0.691259661814092,0.860454717640555,0.354996002191696,1.27820107138737,0,0,0.62041277132864,0,0.335566295393377,0.883352102537187,0.365753774946808,0,0.102662806856247,0,0.485710993059139,0.233939463462106,0.994753875806841,0.713520544665411,0.5647304101948,1.09940516745429,1.05673990496671,1.00326405540328,0,0.940634592723046,0,0,0,0.297046400327086,0,0.169927114687817,0.187967835959707,1.80482086326016,0.299823467774787,0.178553938605658,0,0.561689566824178,0,0,0.143339583151451,0.157771562193185,0.543931921527318,0,1.5870805215462,0,0.462175628631418,2.59575937274273,0.252332849670158,0.109265571963696,0.126698501011437,0.203977659483963,0.534434810531121,0.827054095813604,0.250707539292375,0.454672189309436,0.267964130156178,0,0.620597975171371,0.639701945702943,0,0.516711278688049,1.36564371450887,0.33639558774184,0.12729431655633,0.404234377916439,0.870866991587845,0.342233301085281,1.48174516632093,0.286888821570705,0.332660356546013,0.0814032686109745,0.747091421144008,0,0.179650404213174,0,1.1001729976458,0,0.665756774185513,1.81146414231924,0.961705476909699 | |||
|short_description=p4@RALA | |||
}} |
Latest revision as of 13:27, 18 September 2015
Short description: | p4@RALA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RALA_5end |
Coexpression cluster: | NA |
Association with transcript: | 438bp_to_ENST00000436179_5end |
EntrezGene: | RALA |
HGNC: | 9839 |
UniProt: | C9JPE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.37e-11 | 14 |