FFCP PHASE1:Hg19::chr12:48276681..48276692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7421 | |EntrezGene=7421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12679 | |HGNC=12679 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVY8 | |UniProt=F8VVY8 | ||
|association_with_transcript=25bp_to_ENST00000550314_5end | |association_with_transcript=25bp_to_ENST00000550314_5end | ||
|cluster_id=chr12:48276681..48276692,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_11_at_VDR_5end | |description=CAGE_peak_11_at_VDR_5end | ||
|id=chr12:48276681..48276692,- | |id=chr12:48276681..48276692,- | ||
|ontology_enrichment_celltype=CL:0000080!3.57e-09!6;CL:0002621!5.07e-08!3 | |ontology_enrichment_celltype=CL:0000080!3.57e-09!6;CL:0002621!5.07e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!5.13e-07!1;DOID:0060061!5.13e-07!1;DOID:8691!5.13e-07!1;DOID:0060085!7.60e-07!1;DOID:3165!7.60e-07!1;DOID:0060121!7.60e-07!1;DOID:2438!7.60e-07!1;DOID:4418!7.60e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.18e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.18e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002331!8.32e-14!10;UBERON:0000358!8.32e-14!10;UBERON:0000307!8.32e-14!10;UBERON:0000091!8.32e-14!10;UBERON:0000087!8.32e-14!10;UBERON:0007806!8.32e-14!10;UBERON:0008780!8.32e-14!10;UBERON:0005728!8.32e-14!10;UBERON:0001949!5.07e-08!3;UBERON:0001301!6.08e-07!1;UBERON:0007029!6.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.18e-45;10!UBERON:0000178;1.81e-30;15!UBERON:0000179;1.81e-30;15!UBERON:0000463;1.81e-30;15!UBERON:0000478;1.88e-19;24!UBERON:0002390;5.87e-15;32!UBERON:0000922;9.51e-10;49!UBERON:0002193;7.33e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.18e-45,10;UBERON:0000358,4.18e-45,10;UBERON:0000307,4.18e-45,10;UBERON:0000091,4.18e-45,10;UBERON:0000087,4.18e-45,10;UBERON:0007010,4.18e-45,10;UBERON:0007806,4.18e-45,10;UBERON:0008780,4.18e-45,10;UBERON:0005728,4.18e-45,10;UBERON:0000178,1.81e-30,15;UBERON:0000179,1.81e-30,15;UBERON:0000463,1.81e-30,15;UBERON:0000478,1.88e-19,24 | |||
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|short_description=p11@VDR | |short_description=p11@VDR | ||
}} | }} |
Latest revision as of 13:24, 18 September 2015
Short description: | p11@VDR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_VDR_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 25bp_to_ENST00000550314_5end |
EntrezGene: | VDR |
HGNC: | 12679 |
UniProt: | F8VVY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.18e-45 | 10 |
blastocyst | 4.18e-45 | 10 |
blastula | 4.18e-45 | 10 |
bilaminar disc | 4.18e-45 | 10 |
inner cell mass | 4.18e-45 | 10 |
cleaving embryo | 4.18e-45 | 10 |
connecting stalk | 4.18e-45 | 10 |
inner cell mass derived epiblast | 4.18e-45 | 10 |
extraembryonic mesoderm | 4.18e-45 | 10 |
blood | 1.81e-30 | 15 |
haemolymphatic fluid | 1.81e-30 | 15 |
organism substance | 1.81e-30 | 15 |
extraembryonic structure | 1.88e-19 | 24 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.18e-26 | 2 |