FFCP PHASE1:Hg19::chr12:48213650..48213695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51564 | |EntrezGene=51564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14067 | |HGNC=14067 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKN3,C9JEB6,C9JAH2 | |UniProt=C9JKN3,C9JEB6,C9JAH2 | ||
|association_with_transcript=0bp_to_ENST00000425451,ENST00000430670,ENST00000440293,ENST00000552960_5end | |association_with_transcript=0bp_to_ENST00000425451,ENST00000430670,ENST00000440293,ENST00000552960_5end | ||
|cluster_id=chr12:48213650..48213695,- | |||
|coexpression_cluster_id=C3282 | |coexpression_cluster_id=C3282 | ||
|description=CAGE_peak_1_at_HDAC7_5end | |description=CAGE_peak_1_at_HDAC7_5end | ||
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|ontology_enrichment_celltype=CL:0000222!1.39e-23!119;CL:0000055!1.17e-16!180;CL:0000115!3.42e-15!35;CL:0002078!5.10e-15!44;CL:0000057!5.42e-15!75;CL:0002139!5.02e-14!24;CL:0000213!4.29e-13!57;CL:0000215!4.29e-13!57;CL:0000071!4.40e-12!18;CL:0002546!4.40e-12!18;CL:0000183!4.48e-12!59;CL:0000187!1.75e-10!54;CL:0000192!3.42e-10!42;CL:0000514!3.42e-10!42;CL:0000680!4.79e-10!57;CL:0000056!4.79e-10!57;CL:0000355!4.79e-10!57;CL:0000359!1.49e-09!32;CL:0002371!4.64e-08!591;CL:0000393!6.29e-08!60;CL:0000211!6.29e-08!60;CL:0002321!1.12e-07!248;CL:0000220!1.16e-07!246;CL:0000144!1.23e-07!625;CL:1000449!2.13e-07!16;CL:1000413!7.16e-07!9 | |ontology_enrichment_celltype=CL:0000222!1.39e-23!119;CL:0000055!1.17e-16!180;CL:0000115!3.42e-15!35;CL:0002078!5.10e-15!44;CL:0000057!5.42e-15!75;CL:0002139!5.02e-14!24;CL:0000213!4.29e-13!57;CL:0000215!4.29e-13!57;CL:0000071!4.40e-12!18;CL:0002546!4.40e-12!18;CL:0000183!4.48e-12!59;CL:0000187!1.75e-10!54;CL:0000192!3.42e-10!42;CL:0000514!3.42e-10!42;CL:0000680!4.79e-10!57;CL:0000056!4.79e-10!57;CL:0000355!4.79e-10!57;CL:0000359!1.49e-09!32;CL:0002371!4.64e-08!591;CL:0000393!6.29e-08!60;CL:0000211!6.29e-08!60;CL:0002321!1.12e-07!248;CL:0000220!1.16e-07!246;CL:0000144!1.23e-07!625;CL:1000449!2.13e-07!16;CL:1000413!7.16e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.97e-14;24!CL:0000115;2.83e-13;36!CL:0000071;4.34e-12;18!CL:0002078;1.33e-10;45!CL:0000359;2.57e-09;32!CL:0000213;1.30e-08;58!CL:0000215;1.30e-08;58!CL:0000192;2.16e-08;43!CL:1000413;7.10e-07;9!CL:1000449;7.80e-07;15 | |ontology_enrichment_celltype_v019=CL:0002139;4.97e-14;24!CL:0000115;2.83e-13;36!CL:0000071;4.34e-12;18!CL:0002078;1.33e-10;45!CL:0000359;2.57e-09;32!CL:0000213;1.30e-08;58!CL:0000215;1.30e-08;58!CL:0000192;2.16e-08;43!CL:1000413;7.10e-07;9!CL:1000449;7.80e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.27e-24,121;CL:0000115,9.74e-16,36;CL:0002078,1.51e-15,45;CL:0000057,3.63e-15,76;CL:0002139,5.02e-14,24;CL:0000213,1.41e-13,58;CL:0000215,1.41e-13,58;CL:0000071,4.40e-12,18;CL:0002546,4.40e-12,18;CL:0000187,5.91e-11,55;CL:0000192,1.09e-10,43;CL:0000514,1.09e-10,43;CL:0000680,1.68e-10,58;CL:0000056,1.68e-10,58;CL:0000355,1.68e-10,58;CL:0000359,1.49e-09,32;CL:0000393,2.46e-08,61;CL:0000211,2.46e-08,61;CL:0002321,3.37e-08,250;CL:1000413,7.16e-07,9;CL:1000449,7.60e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;4.34e-12;18!CL:0000514;2.16e-08;43!CL:0000222;1.41e-07;121 | |ontology_enrichment_development_v019=CL:0002546;4.34e-12;18!CL:0000514;2.16e-08;43!CL:0000222;1.41e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!8.81e-31!69;UBERON:0004872!1.04e-29!84;UBERON:0002049!2.12e-29!79;UBERON:0007798!2.12e-29!79;UBERON:0004535!4.60e-29!110;UBERON:0001009!5.58e-28!113;UBERON:0001981!8.28e-27!60;UBERON:0007500!8.28e-27!60;UBERON:0004537!8.28e-27!60;UBERON:0006965!8.28e-27!60;UBERON:0003914!5.70e-26!118;UBERON:0001637!3.15e-19!42;UBERON:0003509!3.15e-19!42;UBERON:0004572!3.15e-19!42;UBERON:0004573!2.03e-15!33;UBERON:0004571!2.03e-15!33;UBERON:0001986!4.40e-12!18;UBERON:0004638!4.40e-12!18;UBERON:0004852!4.40e-12!18;UBERON:0000490!5.84e-12!138;UBERON:0006914!1.95e-11!25;UBERON:0000947!2.92e-11!21;UBERON:0010191!2.92e-11!21;UBERON:0005256!2.94e-11!143;UBERON:0000487!4.45e-11!22;UBERON:0004290!1.06e-10!70;UBERON:0000486!1.57e-10!82;UBERON:0000914!2.67e-10!83;UBERON:0002329!2.67e-10!83;UBERON:0003077!2.67e-10!83;UBERON:0003059!2.67e-10!83;UBERON:0007282!2.67e-10!83;UBERON:0009618!2.67e-10!83;UBERON:0007285!2.67e-10!83;UBERON:0000477!1.08e-09!286;UBERON:0001134!1.34e-09!61;UBERON:0002036!1.34e-09!61;UBERON:0003082!1.34e-09!61;UBERON:0002385!2.33e-09!63;UBERON:0001015!2.33e-09!63;UBERON:0000383!2.33e-09!63;UBERON:0002100!4.14e-09!216;UBERON:0004111!4.23e-09!241;UBERON:0003103!4.58e-09!69;UBERON:0000119!1.55e-08!312;UBERON:0004876!2.18e-08!20;UBERON:0000483!2.94e-08!309;UBERON:0000080!1.23e-07!18;UBERON:0002120!1.23e-07!18;UBERON:0004875!1.23e-07!18;UBERON:0005721!1.23e-07!18;UBERON:0005754!1.23e-07!18;UBERON:0007297!1.23e-07!18;UBERON:0006555!1.39e-07!17;UBERON:0005103!1.39e-07!17;UBERON:0000083!1.39e-07!17;UBERON:0009201!1.39e-07!17;UBERON:0004819!1.39e-07!17;UBERON:0006553!1.39e-07!17;UBERON:0003074!1.39e-07!17;UBERON:0003060!1.39e-07!17;UBERON:0000025!1.48e-07!194;UBERON:0004211!2.13e-07!16;UBERON:0001285!2.13e-07!16;UBERON:0007684!2.13e-07!16;UBERON:0003220!2.13e-07!16;UBERON:0004208!2.13e-07!16;UBERON:0003887!4.22e-07!21;UBERON:0003104!5.16e-07!238;UBERON:0009142!5.16e-07!238;UBERON:0000948!5.66e-07!24;UBERON:0005498!5.66e-07!24;UBERON:0004140!5.66e-07!24;UBERON:0009881!5.66e-07!24;UBERON:0004141!5.66e-07!24;UBERON:0003084!5.66e-07!24;UBERON:0007005!5.66e-07!24;UBERON:0004139!5.66e-07!24;UBERON:0004291!5.66e-07!24;UBERON:0000353!5.91e-07!17;UBERON:0003915!7.16e-07!9;UBERON:0004700!7.16e-07!9;UBERON:0001917!7.16e-07!9 | |ontology_enrichment_uberon=UBERON:0000055!8.81e-31!69;UBERON:0004872!1.04e-29!84;UBERON:0002049!2.12e-29!79;UBERON:0007798!2.12e-29!79;UBERON:0004535!4.60e-29!110;UBERON:0001009!5.58e-28!113;UBERON:0001981!8.28e-27!60;UBERON:0007500!8.28e-27!60;UBERON:0004537!8.28e-27!60;UBERON:0006965!8.28e-27!60;UBERON:0003914!5.70e-26!118;UBERON:0001637!3.15e-19!42;UBERON:0003509!3.15e-19!42;UBERON:0004572!3.15e-19!42;UBERON:0004573!2.03e-15!33;UBERON:0004571!2.03e-15!33;UBERON:0001986!4.40e-12!18;UBERON:0004638!4.40e-12!18;UBERON:0004852!4.40e-12!18;UBERON:0000490!5.84e-12!138;UBERON:0006914!1.95e-11!25;UBERON:0000947!2.92e-11!21;UBERON:0010191!2.92e-11!21;UBERON:0005256!2.94e-11!143;UBERON:0000487!4.45e-11!22;UBERON:0004290!1.06e-10!70;UBERON:0000486!1.57e-10!82;UBERON:0000914!2.67e-10!83;UBERON:0002329!2.67e-10!83;UBERON:0003077!2.67e-10!83;UBERON:0003059!2.67e-10!83;UBERON:0007282!2.67e-10!83;UBERON:0009618!2.67e-10!83;UBERON:0007285!2.67e-10!83;UBERON:0000477!1.08e-09!286;UBERON:0001134!1.34e-09!61;UBERON:0002036!1.34e-09!61;UBERON:0003082!1.34e-09!61;UBERON:0002385!2.33e-09!63;UBERON:0001015!2.33e-09!63;UBERON:0000383!2.33e-09!63;UBERON:0002100!4.14e-09!216;UBERON:0004111!4.23e-09!241;UBERON:0003103!4.58e-09!69;UBERON:0000119!1.55e-08!312;UBERON:0004876!2.18e-08!20;UBERON:0000483!2.94e-08!309;UBERON:0000080!1.23e-07!18;UBERON:0002120!1.23e-07!18;UBERON:0004875!1.23e-07!18;UBERON:0005721!1.23e-07!18;UBERON:0005754!1.23e-07!18;UBERON:0007297!1.23e-07!18;UBERON:0006555!1.39e-07!17;UBERON:0005103!1.39e-07!17;UBERON:0000083!1.39e-07!17;UBERON:0009201!1.39e-07!17;UBERON:0004819!1.39e-07!17;UBERON:0006553!1.39e-07!17;UBERON:0003074!1.39e-07!17;UBERON:0003060!1.39e-07!17;UBERON:0000025!1.48e-07!194;UBERON:0004211!2.13e-07!16;UBERON:0001285!2.13e-07!16;UBERON:0007684!2.13e-07!16;UBERON:0003220!2.13e-07!16;UBERON:0004208!2.13e-07!16;UBERON:0003887!4.22e-07!21;UBERON:0003104!5.16e-07!238;UBERON:0009142!5.16e-07!238;UBERON:0000948!5.66e-07!24;UBERON:0005498!5.66e-07!24;UBERON:0004140!5.66e-07!24;UBERON:0009881!5.66e-07!24;UBERON:0004141!5.66e-07!24;UBERON:0003084!5.66e-07!24;UBERON:0007005!5.66e-07!24;UBERON:0004139!5.66e-07!24;UBERON:0004291!5.66e-07!24;UBERON:0000353!5.91e-07!17;UBERON:0003915!7.16e-07!9;UBERON:0004700!7.16e-07!9;UBERON:0001917!7.16e-07!9 | ||
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|short_description=p1@HDAC7 | |short_description=p1@HDAC7 | ||
}} | }} |
Latest revision as of 13:14, 18 September 2015
Short description: | p1@HDAC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HDAC7_5end |
Coexpression cluster: | C3282_Mesenchymal_Renal_Endothelial_Hepatic_Fibroblast_Pericytes_Trabecular |
Association with transcript: | 0bp_to_ENST00000425451, ENST00000430670, ENST00000440293, ENST00000552960_5end |
EntrezGene: | HDAC7 |
HGNC: | 14067 |
UniProt: | C9JKN3C9JEB6C9JAH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.27e-24 | 121 |
endothelial cell | 9.74e-16 | 36 |
meso-epithelial cell | 1.51e-15 | 45 |
fibroblast | 3.63e-15 | 76 |
endothelial cell of vascular tree | 5.02e-14 | 24 |
lining cell | 1.41e-13 | 58 |
barrier cell | 1.41e-13 | 58 |
blood vessel endothelial cell | 4.40e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.40e-12 | 18 |
muscle cell | 5.91e-11 | 55 |
smooth muscle cell | 1.09e-10 | 43 |
smooth muscle myoblast | 1.09e-10 | 43 |
muscle precursor cell | 1.68e-10 | 58 |
myoblast | 1.68e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.68e-10 | 58 |
vascular associated smooth muscle cell | 1.49e-09 | 32 |
electrically responsive cell | 2.46e-08 | 61 |
electrically active cell | 2.46e-08 | 61 |
embryonic cell | 3.37e-08 | 250 |
endothelial cell of artery | 7.16e-07 | 9 |
epithelial cell of nephron | 7.60e-07 | 15 |