FFCP PHASE1:Hg19::chr12:48151938..48151973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10411 | |EntrezGene=10411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16629 | |HGNC=16629 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXK1 | |UniProt=F8VXK1 | ||
|association_with_transcript=0bp_to_ENST00000495953,ENST00000549347_5end | |association_with_transcript=0bp_to_ENST00000495953,ENST00000549347_5end | ||
|cluster_id=chr12:48151938..48151973,- | |||
|description=CAGE_peak_3_at_RAPGEF3_5end | |description=CAGE_peak_3_at_RAPGEF3_5end | ||
|id=chr12:48151938..48151973,- | |id=chr12:48151938..48151973,- | ||
|ontology_enrichment_celltype=CL:0002139!6.29e-14!24;CL:0000115!8.82e-12!35;CL:0000071!2.71e-11!18;CL:0002546!2.71e-11!18;CL:0002078!1.85e-10!44;CL:1000413!1.51e-07!9 | |ontology_enrichment_celltype=CL:0002139!6.29e-14!24;CL:0000115!8.82e-12!35;CL:0000071!2.71e-11!18;CL:0002546!2.71e-11!18;CL:0002078!1.85e-10!44;CL:1000413!1.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.36e-12;24!CL:0000115;4.49e-10;36!CL:0000071;4.89e-10;18!CL:0002543;3.83e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.60e-12,24;CL:0000115,1.63e-11,36;CL:0000071,2.32e-10,18;CL:0002546,2.32e-10,18;CL:0002543,1.28e-09,6;CL:0002078,2.47e-09,45 | |||
|ontology_enrichment_development_v019=CL:0002546;4.89e-10;18!UBERON:0006601;6.23e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-68!115;UBERON:0001049!6.63e-33!57;UBERON:0005068!6.63e-33!57;UBERON:0006241!6.63e-33!57;UBERON:0007135!6.63e-33!57;UBERON:0003075!4.25e-28!86;UBERON:0007284!4.25e-28!86;UBERON:0002616!5.67e-28!59;UBERON:0002346!6.96e-26!90;UBERON:0003080!1.54e-24!42;UBERON:0000955!1.42e-23!69;UBERON:0006238!1.42e-23!69;UBERON:0002780!1.73e-23!41;UBERON:0001890!1.73e-23!41;UBERON:0006240!1.73e-23!41;UBERON:0001017!3.04e-23!82;UBERON:0004111!5.53e-23!241;UBERON:0000477!8.46e-23!286;UBERON:0005743!2.14e-22!86;UBERON:0000025!3.39e-22!194;UBERON:0002020!2.66e-20!34;UBERON:0003528!2.66e-20!34;UBERON:0001893!4.21e-20!34;UBERON:0002791!2.11e-19!33;UBERON:0000073!1.73e-18!94;UBERON:0001016!1.73e-18!94;UBERON:0001869!1.96e-18!32;UBERON:0003056!2.90e-18!61;UBERON:0002619!7.36e-16!22;UBERON:0000153!8.62e-16!129;UBERON:0007811!8.62e-16!129;UBERON:0000119!9.41e-15!312;UBERON:0000033!1.55e-14!123;UBERON:0000483!2.04e-14!309;UBERON:0001950!7.53e-14!20;UBERON:0000956!3.71e-13!25;UBERON:0000203!3.71e-13!25;UBERON:0004121!4.20e-12!169;UBERON:0000924!2.40e-11!173;UBERON:0006601!2.40e-11!173;UBERON:0001986!2.71e-11!18;UBERON:0004638!2.71e-11!18;UBERON:0004852!2.71e-11!18;UBERON:0000064!4.72e-11!219;UBERON:0000467!5.86e-11!625;UBERON:0000480!7.41e-11!626;UBERON:0000468!1.43e-10!659;UBERON:0003103!5.57e-10!69;UBERON:0003076!2.06e-09!15;UBERON:0003057!2.06e-09!15;UBERON:0000487!2.59e-09!22;UBERON:0000922!3.44e-09!612;UBERON:0000062!3.84e-09!511;UBERON:0002308!5.39e-09!9;UBERON:0000125!5.39e-09!9;UBERON:0002050!9.00e-09!605;UBERON:0005423!9.00e-09!605;UBERON:0006914!1.31e-08!25;UBERON:0002420!1.49e-08!9;UBERON:0007245!1.49e-08!9;UBERON:0010009!1.49e-08!9;UBERON:0010011!1.49e-08!9;UBERON:0000454!1.49e-08!9;UBERON:0000481!1.76e-08!347;UBERON:0000923!1.84e-08!604;UBERON:0005291!1.84e-08!604;UBERON:0006598!1.84e-08!604;UBERON:0002532!1.84e-08!604;UBERON:0002298!7.39e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0003915!1.51e-07!9;UBERON:0004700!1.51e-07!9;UBERON:0001917!1.51e-07!9;UBERON:0004733!1.66e-07!12;UBERON:0002028!1.66e-07!12;UBERON:0007277!1.66e-07!12;UBERON:0003887!2.15e-07!21;UBERON:0009663!3.68e-07!7;UBERON:0000489!6.93e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.45e-68!115;UBERON:0001049!6.63e-33!57;UBERON:0005068!6.63e-33!57;UBERON:0006241!6.63e-33!57;UBERON:0007135!6.63e-33!57;UBERON:0003075!4.25e-28!86;UBERON:0007284!4.25e-28!86;UBERON:0002616!5.67e-28!59;UBERON:0002346!6.96e-26!90;UBERON:0003080!1.54e-24!42;UBERON:0000955!1.42e-23!69;UBERON:0006238!1.42e-23!69;UBERON:0002780!1.73e-23!41;UBERON:0001890!1.73e-23!41;UBERON:0006240!1.73e-23!41;UBERON:0001017!3.04e-23!82;UBERON:0004111!5.53e-23!241;UBERON:0000477!8.46e-23!286;UBERON:0005743!2.14e-22!86;UBERON:0000025!3.39e-22!194;UBERON:0002020!2.66e-20!34;UBERON:0003528!2.66e-20!34;UBERON:0001893!4.21e-20!34;UBERON:0002791!2.11e-19!33;UBERON:0000073!1.73e-18!94;UBERON:0001016!1.73e-18!94;UBERON:0001869!1.96e-18!32;UBERON:0003056!2.90e-18!61;UBERON:0002619!7.36e-16!22;UBERON:0000153!8.62e-16!129;UBERON:0007811!8.62e-16!129;UBERON:0000119!9.41e-15!312;UBERON:0000033!1.55e-14!123;UBERON:0000483!2.04e-14!309;UBERON:0001950!7.53e-14!20;UBERON:0000956!3.71e-13!25;UBERON:0000203!3.71e-13!25;UBERON:0004121!4.20e-12!169;UBERON:0000924!2.40e-11!173;UBERON:0006601!2.40e-11!173;UBERON:0001986!2.71e-11!18;UBERON:0004638!2.71e-11!18;UBERON:0004852!2.71e-11!18;UBERON:0000064!4.72e-11!219;UBERON:0000467!5.86e-11!625;UBERON:0000480!7.41e-11!626;UBERON:0000468!1.43e-10!659;UBERON:0003103!5.57e-10!69;UBERON:0003076!2.06e-09!15;UBERON:0003057!2.06e-09!15;UBERON:0000487!2.59e-09!22;UBERON:0000922!3.44e-09!612;UBERON:0000062!3.84e-09!511;UBERON:0002308!5.39e-09!9;UBERON:0000125!5.39e-09!9;UBERON:0002050!9.00e-09!605;UBERON:0005423!9.00e-09!605;UBERON:0006914!1.31e-08!25;UBERON:0002420!1.49e-08!9;UBERON:0007245!1.49e-08!9;UBERON:0010009!1.49e-08!9;UBERON:0010011!1.49e-08!9;UBERON:0000454!1.49e-08!9;UBERON:0000481!1.76e-08!347;UBERON:0000923!1.84e-08!604;UBERON:0005291!1.84e-08!604;UBERON:0006598!1.84e-08!604;UBERON:0002532!1.84e-08!604;UBERON:0002298!7.39e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0003915!1.51e-07!9;UBERON:0004700!1.51e-07!9;UBERON:0001917!1.51e-07!9;UBERON:0004733!1.66e-07!12;UBERON:0002028!1.66e-07!12;UBERON:0007277!1.66e-07!12;UBERON:0003887!2.15e-07!21;UBERON:0009663!3.68e-07!7;UBERON:0000489!6.93e-07!32 | ||
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| ||
|short_description=p3@RAPGEF3 | |short_description=p3@RAPGEF3 | ||
}} | }} |
Latest revision as of 13:02, 18 September 2015
Short description: | p3@RAPGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAPGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495953, ENST00000549347_5end |
EntrezGene: | RAPGEF3 |
HGNC: | 16629 |
UniProt: | F8VXK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.60e-12 | 24 |
endothelial cell | 1.63e-11 | 36 |
blood vessel endothelial cell | 2.32e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-10 | 18 |
vein endothelial cell | 1.28e-09 | 6 |
meso-epithelial cell | 2.47e-09 | 45 |