FFCP PHASE1:Hg19::chr21:42613665..42613680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25825 | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |HGNC=934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463674_5end | |association_with_transcript=0bp_to_ENST00000463674_5end | ||
|cluster_id=chr21:42613665..42613680,+ | |||
|coexpression_cluster_id=C296 | |coexpression_cluster_id=C296 | ||
|description=CAGE_peak_10_at_BACE2_5end | |description=CAGE_peak_10_at_BACE2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!1.12e-11!3;CL:0000861!1.12e-11!3 | |ontology_enrichment_celltype=CL:0002150!1.12e-11!3;CL:0000861!1.12e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;3.43e-09;2 | |ontology_enrichment_celltype_v019=CL:1000415;3.43e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.43e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.26e-18;29!UBERON:0006298;5.53e-17;1!UBERON:0008801;1.93e-16;1!UBERON:0006595;6.39e-09;86 | |ontology_enrichment_development_v019=UBERON:0008947;1.26e-18;29!UBERON:0006298;5.53e-17;1!UBERON:0008801;1.93e-16;1!UBERON:0006595;6.39e-09;86 | ||
|ontology_enrichment_disease=DOID:305!1.48e-07!106 | |ontology_enrichment_disease=DOID:305!1.48e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1325;1.09e-09;7!DOID:3904;1.09e-09;7 | |ontology_enrichment_disease_v019=DOID:1325;1.09e-09;7!DOID:3904;1.09e-09;7 | ||
|ontology_enrichment_disease_v019_2=DOID:1325,1.04e-09,7;DOID:3904,1.04e-09,7 | |||
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| ||
|short_description=p10@BACE2 | |short_description=p10@BACE2 | ||
}} | }} |
Latest revision as of 12:45, 18 September 2015
Short description: | p10@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BACE2_5end |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | 0bp_to_ENST00000463674_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.57e-32 | 2 |
saliva-secreting gland | 7.83e-24 | 6 |
gland of oral region | 7.83e-24 | 6 |
gland of foregut | 7.83e-24 | 6 |
oral gland | 7.83e-24 | 6 |
oral cavity | 7.83e-24 | 6 |
submandibular gland | 5.53e-17 | 1 |
submandibular gland primordium | 5.53e-17 | 1 |
parotid gland | 1.21e-16 | 1 |
cheek | 1.21e-16 | 1 |
parotid gland primordium | 1.21e-16 | 1 |
respiratory system | 6.69e-16 | 74 |
larynx | 1.35e-15 | 9 |
gland of gut | 1.41e-14 | 10 |
respiratory primordium | 4.00e-14 | 38 |
endoderm of foregut | 4.00e-14 | 38 |
foregut | 2.07e-13 | 87 |
subdivision of digestive tract | 7.00e-12 | 118 |
digestive system | 1.22e-11 | 145 |
digestive tract | 1.22e-11 | 145 |
primitive gut | 1.22e-11 | 145 |
segment of respiratory tract | 2.22e-11 | 47 |
endoderm-derived structure | 1.87e-10 | 160 |
endoderm | 1.87e-10 | 160 |
presumptive endoderm | 1.87e-10 | 160 |
respiratory tract | 7.11e-10 | 54 |
open tracheal system trachea | 5.08e-09 | 2 |
midface | 5.49e-09 | 2 |
upper respiratory tract | 1.06e-07 | 19 |
orifice | 3.94e-07 | 36 |
oral opening | 6.22e-07 | 22 |
primordium | 6.65e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.04e-09 | 7 |
bronchogenic carcinoma | 1.04e-09 | 7 |