FFCP PHASE1:Hg19::chr21:42613665..42613680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25825 | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |HGNC=934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463674_5end | |association_with_transcript=0bp_to_ENST00000463674_5end | ||
|cluster_id=chr21:42613665..42613680,+ | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_10_at_BACE2_5end | |description=CAGE_peak_10_at_BACE2_5end | ||
|id=chr21:42613665..42613680,+ | |id=chr21:42613665..42613680,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.12e-11!3;CL:0000861!1.12e-11!3 | |ontology_enrichment_celltype=CL:0002150!1.12e-11!3;CL:0000861!1.12e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;3.43e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.43e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.26e-18;29!UBERON:0006298;5.53e-17;1!UBERON:0008801;1.93e-16;1!UBERON:0006595;6.39e-09;86 | |||
|ontology_enrichment_disease=DOID:305!1.48e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1325;1.09e-09;7!DOID:3904;1.09e-09;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.04e-09,7;DOID:3904,1.04e-09,7 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.28e-34!9;UBERON:0001557!1.57e-26!19;UBERON:0000065!1.54e-21!53;UBERON:0001004!1.22e-20!72;UBERON:0008947!8.57e-20!38;UBERON:0003258!8.57e-20!38;UBERON:0000072!1.18e-17!46;UBERON:0001041!1.07e-16!98;UBERON:0000077!5.51e-15!130;UBERON:0007023!4.53e-14!115;UBERON:0004921!2.23e-12!129;UBERON:0004185!2.23e-12!129;UBERON:0004119!6.62e-12!169;UBERON:0000925!6.62e-12!169;UBERON:0006595!6.62e-12!169;UBERON:0001007!2.25e-11!155;UBERON:0001555!2.25e-11!155;UBERON:0007026!2.25e-11!155;UBERON:0003408!1.59e-09!10;UBERON:0001829!2.26e-09!2;UBERON:0000341!1.27e-08!2;UBERON:0001048!2.11e-07!168;UBERON:0000063!2.13e-07!97;UBERON:0001044!8.59e-07!6;UBERON:0003293!8.59e-07!6;UBERON:0003294!8.59e-07!6;UBERON:0010047!8.59e-07!6;UBERON:0000167!8.59e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.37e-31;2!UBERON:0001044;9.86e-24;6!UBERON:0003293;9.86e-24;6!UBERON:0003294;9.86e-24;6!UBERON:0010047;9.86e-24;6!UBERON:0003408;9.86e-24;6!UBERON:0000167;9.86e-24;6!UBERON:0001736;5.53e-17;1!UBERON:0001831;1.93e-16;1!UBERON:0001567;1.93e-16;1!UBERON:0001737;9.99e-16;9!UBERON:0001557;9.99e-16;9!UBERON:0000072;1.12e-12;37!UBERON:0000065;3.13e-12;44!UBERON:0001041;1.52e-10;14!UBERON:0001004;2.23e-09;65!UBERON:0003127;5.08e-09;2!UBERON:0004089;6.93e-09;2!UBERON:0000161;6.47e-08;19!UBERON:0000166;6.47e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.57e-32,2;UBERON:0001044,7.83e-24,6;UBERON:0003293,7.83e-24,6;UBERON:0003294,7.83e-24,6;UBERON:0010047,7.83e-24,6;UBERON:0000167,7.83e-24,6;UBERON:0001736,5.53e-17,1;UBERON:0006298,5.53e-17,1;UBERON:0001831,1.21e-16,1;UBERON:0001567,1.21e-16,1;UBERON:0008801,1.21e-16,1;UBERON:0001004,6.69e-16,74;UBERON:0001737,1.35e-15,9;UBERON:0003408,1.41e-14,10;UBERON:0008947,4.00e-14,38;UBERON:0003258,4.00e-14,38;UBERON:0001041,2.07e-13,87;UBERON:0004921,7.00e-12,118;UBERON:0001007,1.22e-11,145;UBERON:0001555,1.22e-11,145;UBERON:0007026,1.22e-11,145;UBERON:0000072,2.22e-11,47;UBERON:0004119,1.87e-10,160;UBERON:0000925,1.87e-10,160;UBERON:0006595,1.87e-10,160;UBERON:0000065,7.11e-10,54;UBERON:0003127,5.08e-09,2;UBERON:0004089,5.49e-09,2;UBERON:0001557,1.06e-07,19;UBERON:0000161,3.94e-07,36;UBERON:0000166,6.22e-07,22;UBERON:0001048,6.65e-07,160 | |||
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| ||
|short_description=p10@BACE2 | |short_description=p10@BACE2 | ||
}} | }} |
Latest revision as of 12:45, 18 September 2015
Short description: | p10@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BACE2_5end |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | 0bp_to_ENST00000463674_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.57e-32 | 2 |
saliva-secreting gland | 7.83e-24 | 6 |
gland of oral region | 7.83e-24 | 6 |
gland of foregut | 7.83e-24 | 6 |
oral gland | 7.83e-24 | 6 |
oral cavity | 7.83e-24 | 6 |
submandibular gland | 5.53e-17 | 1 |
submandibular gland primordium | 5.53e-17 | 1 |
parotid gland | 1.21e-16 | 1 |
cheek | 1.21e-16 | 1 |
parotid gland primordium | 1.21e-16 | 1 |
respiratory system | 6.69e-16 | 74 |
larynx | 1.35e-15 | 9 |
gland of gut | 1.41e-14 | 10 |
respiratory primordium | 4.00e-14 | 38 |
endoderm of foregut | 4.00e-14 | 38 |
foregut | 2.07e-13 | 87 |
subdivision of digestive tract | 7.00e-12 | 118 |
digestive system | 1.22e-11 | 145 |
digestive tract | 1.22e-11 | 145 |
primitive gut | 1.22e-11 | 145 |
segment of respiratory tract | 2.22e-11 | 47 |
endoderm-derived structure | 1.87e-10 | 160 |
endoderm | 1.87e-10 | 160 |
presumptive endoderm | 1.87e-10 | 160 |
respiratory tract | 7.11e-10 | 54 |
open tracheal system trachea | 5.08e-09 | 2 |
midface | 5.49e-09 | 2 |
upper respiratory tract | 1.06e-07 | 19 |
orifice | 3.94e-07 | 36 |
oral opening | 6.22e-07 | 22 |
primordium | 6.65e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.04e-09 | 7 |
bronchogenic carcinoma | 1.04e-09 | 7 |