FFCP PHASE1:Hg19::chr14:102289952..102289976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5527 | |EntrezGene=5527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9311 | |HGNC=9311 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000556493_5end | |association_with_transcript=-13bp_to_ENST00000556493_5end | ||
|cluster_id=chr14:102289952..102289976,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_6_at_PPP2R5C_5end | |description=CAGE_peak_6_at_PPP2R5C_5end | ||
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|ontology_enrichment_celltype=CL:0000838!1.02e-44!52;CL:0000542!1.53e-43!53;CL:0000051!1.53e-43!53;CL:0000738!5.59e-40!140;CL:0002087!3.65e-38!119;CL:0002031!2.05e-31!124;CL:0000037!1.58e-28!172;CL:0000566!1.58e-28!172;CL:0000988!3.40e-28!182;CL:0002032!2.69e-26!165;CL:0000837!2.69e-26!165;CL:0000791!4.22e-25!18;CL:0000789!4.22e-25!18;CL:0002420!4.22e-25!18;CL:0002419!4.22e-25!18;CL:0000790!4.22e-25!18;CL:0000084!8.51e-24!25;CL:0000827!8.51e-24!25;CL:0000945!4.60e-18!24;CL:0000826!4.60e-18!24;CL:0000625!3.56e-16!11;CL:0000236!8.46e-16!14;CL:0000624!1.79e-09!6;CL:0000080!2.58e-07!6 | |ontology_enrichment_celltype=CL:0000838!1.02e-44!52;CL:0000542!1.53e-43!53;CL:0000051!1.53e-43!53;CL:0000738!5.59e-40!140;CL:0002087!3.65e-38!119;CL:0002031!2.05e-31!124;CL:0000037!1.58e-28!172;CL:0000566!1.58e-28!172;CL:0000988!3.40e-28!182;CL:0002032!2.69e-26!165;CL:0000837!2.69e-26!165;CL:0000791!4.22e-25!18;CL:0000789!4.22e-25!18;CL:0002420!4.22e-25!18;CL:0002419!4.22e-25!18;CL:0000790!4.22e-25!18;CL:0000084!8.51e-24!25;CL:0000827!8.51e-24!25;CL:0000945!4.60e-18!24;CL:0000826!4.60e-18!24;CL:0000625!3.56e-16!11;CL:0000236!8.46e-16!14;CL:0000624!1.79e-09!6;CL:0000080!2.58e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.74e-41;18!CL:0000789;1.74e-41;18!CL:0002419;1.74e-41;18!CL:0000542;2.01e-31;53!CL:0000084;2.90e-31;25!CL:0000625;2.71e-26;11!CL:0000945;2.67e-18;24!CL:0000236;1.60e-17;13!CL:0000624;6.16e-15;6!CL:0002087;8.38e-12;104!CL:0000898;1.28e-08;3!CL:0000623;3.93e-08;3!CL:0000226;9.49e-08;3!CL:0000842;9.49e-08;3!CL:0000767;2.23e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;1.74e-41;18!CL:0000789;1.74e-41;18!CL:0002419;1.74e-41;18!CL:0000542;2.01e-31;53!CL:0000084;2.90e-31;25!CL:0000625;2.71e-26;11!CL:0000945;2.67e-18;24!CL:0000236;1.60e-17;13!CL:0000624;6.16e-15;6!CL:0002087;8.38e-12;104!CL:0000898;1.28e-08;3!CL:0000623;3.93e-08;3!CL:0000226;9.49e-08;3!CL:0000842;9.49e-08;3!CL:0000767;2.23e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.38e-54,52;CL:0000542,5.93e-53,53;CL:0000051,5.93e-53,53;CL:0000791,1.79e-41,18;CL:0000789,1.79e-41,18;CL:0002420,1.79e-41,18;CL:0002419,1.79e-41,18;CL:0000790,1.79e-41,18;CL:0000738,1.14e-33,136;CL:0002087,4.34e-32,115;CL:0000084,2.64e-31,25;CL:0000827,2.64e-31,25;CL:0000625,2.69e-26,11;CL:0002031,1.57e-25,120;CL:0000037,1.78e-24,168;CL:0000988,1.69e-22,177;CL:0002032,3.42e-21,161;CL:0000837,3.42e-21,161;CL:0000236,4.40e-19,14;CL:0000945,2.60e-18,24;CL:0000826,2.60e-18,24;CL:0000624,6.10e-15,6;CL:0000898,1.28e-08,3;CL:0000623,4.03e-08,3;CL:0000825,4.03e-08,3;CL:0000226,9.71e-08,3;CL:0000842,9.71e-08,3;CL:0000767,2.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.74e-41;18!CL:0000051;2.01e-31;53 | |ontology_enrichment_development_v019=CL:0000790;1.74e-41;18!CL:0000051;2.01e-31;53 | ||
|ontology_enrichment_disease=DOID:0060058!3.00e-07!10 | |ontology_enrichment_disease=DOID:0060058!3.00e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.25e-09;10 | |ontology_enrichment_disease_v019=DOID:0060058;3.25e-09;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.79e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.85e-18!15;UBERON:0000179!9.85e-18!15;UBERON:0000463!9.85e-18!15;UBERON:0002390!2.60e-12!102;UBERON:0003061!2.60e-12!102;UBERON:0007023!6.07e-12!115;UBERON:0002193!1.28e-11!112;UBERON:0004177!1.13e-08!7 | |ontology_enrichment_uberon=UBERON:0000178!9.85e-18!15;UBERON:0000179!9.85e-18!15;UBERON:0000463!9.85e-18!15;UBERON:0002390!2.60e-12!102;UBERON:0003061!2.60e-12!102;UBERON:0007023!6.07e-12!115;UBERON:0002193!1.28e-11!112;UBERON:0004177!1.13e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.97e-20;15!UBERON:0000179;9.97e-20;15!UBERON:0000463;9.97e-20;15!UBERON:0002390;1.66e-12;32!UBERON:0002193;2.95e-09;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;9.97e-20;15!UBERON:0000179;9.97e-20;15!UBERON:0000463;9.97e-20;15!UBERON:0002390;1.66e-12;32!UBERON:0002193;2.95e-09;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.03e-19,15;UBERON:0000179,1.03e-19,15;UBERON:0000463,1.03e-19,15;UBERON:0004177,2.47e-10,7;UBERON:0005057,2.47e-10,7;UBERON:0002370,5.60e-09,4;UBERON:0005058,5.60e-09,4;UBERON:0009113,5.60e-09,4;UBERON:0003295,5.60e-09,4;UBERON:0005562,5.60e-09,4;UBERON:0002193,2.52e-07,108;UBERON:0002390,4.17e-07,98;UBERON:0003061,4.17e-07,98 | |||
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|short_description=p6@PPP2R5C | |short_description=p6@PPP2R5C | ||
}} | }} |
Latest revision as of 12:44, 18 September 2015
Short description: | p6@PPP2R5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPP2R5C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -13bp_to_ENST00000556493_5end |
EntrezGene: | PPP2R5C |
HGNC: | 9311 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.38e-54 | 52 |
lymphocyte | 5.93e-53 | 53 |
common lymphoid progenitor | 5.93e-53 | 53 |
mature alpha-beta T cell | 1.79e-41 | 18 |
alpha-beta T cell | 1.79e-41 | 18 |
immature T cell | 1.79e-41 | 18 |
mature T cell | 1.79e-41 | 18 |
immature alpha-beta T cell | 1.79e-41 | 18 |
leukocyte | 1.14e-33 | 136 |
nongranular leukocyte | 4.34e-32 | 115 |
T cell | 2.64e-31 | 25 |
pro-T cell | 2.64e-31 | 25 |
CD8-positive, alpha-beta T cell | 2.69e-26 | 11 |
hematopoietic lineage restricted progenitor cell | 1.57e-25 | 120 |
hematopoietic stem cell | 1.78e-24 | 168 |
hematopoietic cell | 1.69e-22 | 177 |
hematopoietic oligopotent progenitor cell | 3.42e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.42e-21 | 161 |
B cell | 4.40e-19 | 14 |
lymphocyte of B lineage | 2.60e-18 | 24 |
pro-B cell | 2.60e-18 | 24 |
CD4-positive, alpha-beta T cell | 6.10e-15 | 6 |
naive T cell | 1.28e-08 | 3 |
natural killer cell | 4.03e-08 | 3 |
pro-NK cell | 4.03e-08 | 3 |
single nucleate cell | 9.71e-08 | 3 |
mononuclear cell | 9.71e-08 | 3 |
basophil | 2.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.03e-19 | 15 |
haemolymphatic fluid | 1.03e-19 | 15 |
organism substance | 1.03e-19 | 15 |
hemopoietic organ | 2.47e-10 | 7 |
immune organ | 2.47e-10 | 7 |
thymus | 5.60e-09 | 4 |
hemolymphoid system gland | 5.60e-09 | 4 |
thymic region | 5.60e-09 | 4 |
pharyngeal gland | 5.60e-09 | 4 |
thymus primordium | 5.60e-09 | 4 |
hemolymphoid system | 2.52e-07 | 108 |
hematopoietic system | 4.17e-07 | 98 |
blood island | 4.17e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.79e-09 | 10 |