FFCP PHASE1:Hg19::chr8:55471724..55471729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6101 | |EntrezGene=6101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10263 | |HGNC=10263 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVW9 | |UniProt=E7EVW9 | ||
|association_with_transcript=0bp_to_ENST00000427058_5end | |association_with_transcript=0bp_to_ENST00000427058_5end | ||
|cluster_id=chr8:55471724..55471729,+ | |||
|coexpression_cluster_id=C2293 | |coexpression_cluster_id=C2293 | ||
|description=CAGE_peak_8_at_RP1_5end | |description=CAGE_peak_8_at_RP1_5end | ||
|id=chr8:55471724..55471729,+ | |id=chr8:55471724..55471729,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.99e-12!3;CL:1000615!3.99e-12!3;CL:0002306!3.99e-12!3 | |ontology_enrichment_celltype=CL:0000239!3.99e-12!3;CL:1000615!3.99e-12!3;CL:0002306!3.99e-12!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.57e-29;29!UBERON:0001041;3.58e-18;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;1.85e-12;3!DOID:3908;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.85e-12,3;DOID:3908,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000341!3.76e-18!2;UBERON:0006853!3.99e-12!3;UBERON:0007685!3.99e-12!3;UBERON:0004134!3.99e-12!3;UBERON:0002171!4.87e-10!1;UBERON:0006518!4.87e-10!1;UBERON:0008949!4.87e-10!1;UBERON:0000101!4.87e-10!1;UBERON:0002167!4.87e-10!1;UBERON:0002048!1.28e-09!22;UBERON:0000117!1.28e-09!22;UBERON:0000171!1.28e-09!22;UBERON:0000170!1.28e-09!22;UBERON:0005597!1.28e-09!22;UBERON:0000118!1.28e-09!22;UBERON:0005178!1.22e-08!34;UBERON:0002224!1.22e-08!34;UBERON:0005181!2.22e-08!35;UBERON:0005153!8.34e-08!37;UBERON:0008947!1.12e-07!38;UBERON:0003258!1.12e-07!38 | |ontology_enrichment_uberon=UBERON:0000341!3.76e-18!2;UBERON:0006853!3.99e-12!3;UBERON:0007685!3.99e-12!3;UBERON:0004134!3.99e-12!3;UBERON:0002171!4.87e-10!1;UBERON:0006518!4.87e-10!1;UBERON:0008949!4.87e-10!1;UBERON:0000101!4.87e-10!1;UBERON:0002167!4.87e-10!1;UBERON:0002048!1.28e-09!22;UBERON:0000117!1.28e-09!22;UBERON:0000171!1.28e-09!22;UBERON:0000170!1.28e-09!22;UBERON:0005597!1.28e-09!22;UBERON:0000118!1.28e-09!22;UBERON:0005178!1.22e-08!34;UBERON:0002224!1.22e-08!34;UBERON:0005181!2.22e-08!35;UBERON:0005153!8.34e-08!37;UBERON:0008947!1.12e-07!38;UBERON:0003258!1.12e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.05e-34;1!UBERON:0006518;5.05e-34;1!UBERON:0008949;5.05e-34;1!UBERON:0000101;5.05e-34;1!UBERON:0002167;5.05e-34;1!UBERON:0002048;1.61e-24;22!UBERON:0000117;1.61e-24;22!UBERON:0000171;1.61e-24;22!UBERON:0000170;1.61e-24;22!UBERON:0005178;4.45e-21;34!UBERON:0002224;4.45e-21;34!UBERON:0003127;9.07e-18;2!UBERON:0000341;9.07e-18;2!UBERON:0005181;3.83e-16;35!UBERON:0000065;2.53e-14;44!UBERON:0000915;8.80e-11;52!UBERON:0001004;2.34e-08;65!UBERON:0000974;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.05e-34,1;UBERON:0006518,5.05e-34,1;UBERON:0008949,5.05e-34,1;UBERON:0000101,5.05e-34,1;UBERON:0002167,5.05e-34,1;UBERON:0005178,1.12e-24,34;UBERON:0002224,1.12e-24,34;UBERON:0002048,1.61e-24,22;UBERON:0000117,1.61e-24,22;UBERON:0000171,1.61e-24,22;UBERON:0000170,1.61e-24,22;UBERON:0005597,1.61e-24,22;UBERON:0000118,1.61e-24,22;UBERON:0005181,5.44e-24,35;UBERON:0008947,3.81e-22,38;UBERON:0003258,3.81e-22,38;UBERON:0003127,7.67e-18,2;UBERON:0000341,1.07e-17,2;UBERON:0000915,2.44e-16,52;UBERON:0000065,9.39e-16,54;UBERON:0005153,7.36e-15,37;UBERON:0005157,7.92e-12,47;UBERON:0001004,1.25e-11,74;UBERON:0001041,5.89e-10,87;UBERON:0005177,1.24e-08,101;UBERON:0009569,8.07e-08,112;UBERON:0004921,2.22e-07,118;UBERON:0005911,5.36e-07,82 | |||
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|short_description=p8@RP1 | |short_description=p8@RP1 | ||
}} | }} |
Latest revision as of 12:43, 18 September 2015
Short description: | p8@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RP1_5end |
Coexpression cluster: | C2293_large_lung_nonsmall_throat_trachea_bronchioalveolar_thyroid |
Association with transcript: | 0bp_to_ENST00000427058_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | E7EVW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.05e-34 | 1 |
right lung lobe | 5.05e-34 | 1 |
lower lobe of lung | 5.05e-34 | 1 |
lobe of lung | 5.05e-34 | 1 |
right lung | 5.05e-34 | 1 |
thoracic cavity element | 1.12e-24 | 34 |
thoracic cavity | 1.12e-24 | 34 |
lung | 1.61e-24 | 22 |
respiratory tube | 1.61e-24 | 22 |
respiration organ | 1.61e-24 | 22 |
pair of lungs | 1.61e-24 | 22 |
lung primordium | 1.61e-24 | 22 |
lung bud | 1.61e-24 | 22 |
thoracic segment organ | 5.44e-24 | 35 |
respiratory primordium | 3.81e-22 | 38 |
endoderm of foregut | 3.81e-22 | 38 |
open tracheal system trachea | 7.67e-18 | 2 |
throat | 1.07e-17 | 2 |
thoracic segment of trunk | 2.44e-16 | 52 |
respiratory tract | 9.39e-16 | 54 |
epithelial bud | 7.36e-15 | 37 |
epithelial fold | 7.92e-12 | 47 |
respiratory system | 1.25e-11 | 74 |
foregut | 5.89e-10 | 87 |
trunk region element | 1.24e-08 | 101 |
subdivision of trunk | 8.07e-08 | 112 |
subdivision of digestive tract | 2.22e-07 | 118 |
endo-epithelium | 5.36e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.85e-12 | 3 |
non-small cell lung carcinoma | 5.35e-08 | 5 |