FFCP PHASE1:Hg19::chr16:89883015..89883088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2175 | |EntrezGene=2175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3582 | |HGNC=3582 | ||
|TSSclassifier=strong | |||
|UniProt=O15360,F5H8D5,Q0VAP4,Q86U55 | |UniProt=O15360,F5H8D5,Q0VAP4,Q86U55 | ||
|association_with_transcript=0bp_to_ENST00000389301,ENST00000389302,ENST00000534992,ENST00000543736,NM_000135,NM_001018112,uc002fou.1,uc002fov.1,uc002fow.1,uc002fox.1,uc002foy.2,uc010ciu.1,uc010vpn.1_5end | |association_with_transcript=0bp_to_ENST00000389301,ENST00000389302,ENST00000534992,ENST00000543736,NM_000135,NM_001018112,uc002fou.1,uc002fov.1,uc002fow.1,uc002fox.1,uc002foy.2,uc010ciu.1,uc010vpn.1_5end | ||
|cluster_id=chr16:89883015..89883088,- | |||
|coexpression_cluster_id=C1675 | |||
|description=CAGE_peak_1_at_FANCA_5end | |description=CAGE_peak_1_at_FANCA_5end | ||
|id=chr16:89883015..89883088,- | |id=chr16:89883015..89883088,- | ||
|ontology_enrichment_celltype=CL:0000066!4.01e-18!254;CL:0000012!3.37e-10!682;CL:0000548!6.83e-10!679;CL:0000004!6.83e-10!679;CL:0000255!6.83e-10!679;CL:0002321!3.66e-07!248;CL:0000220!9.20e-07!246 | |ontology_enrichment_celltype=CL:0000066!4.01e-18!254;CL:0000012!3.37e-10!682;CL:0000548!6.83e-10!679;CL:0000004!6.83e-10!679;CL:0000255!6.83e-10!679;CL:0002321!3.66e-07!248;CL:0000220!9.20e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002319;9.82e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.66e-18,253;CL:0002321,5.06e-07,250;CL:0002319,9.44e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.22e-39!235;DOID:14566!1.07e-37!239;DOID:0050686!1.07e-21!137;DOID:0050687!2.14e-20!143;DOID:2531!2.64e-18!51;DOID:0060083!2.64e-18!51;DOID:305!8.80e-18!106;DOID:1240!1.60e-14!39;DOID:8692!1.64e-11!31 | |ontology_enrichment_disease=DOID:162!2.22e-39!235;DOID:14566!1.07e-37!239;DOID:0050686!1.07e-21!137;DOID:0050687!2.14e-20!143;DOID:2531!2.64e-18!51;DOID:0060083!2.64e-18!51;DOID:305!8.80e-18!106;DOID:1240!1.60e-14!39;DOID:8692!1.64e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;9.54e-12;39!DOID:2531;1.35e-11;51!DOID:0060083;1.35e-11;51!DOID:8692;3.25e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.32e-39,235;DOID:14566,5.79e-38,239;DOID:0050686,9.41e-22,137;DOID:0050687,1.46e-20,143;DOID:2531,2.19e-18,51;DOID:0060083,2.19e-18,51;DOID:305,7.34e-18,106;DOID:1240,1.38e-14,39;DOID:8692,1.47e-11,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@FANCA | |short_description=p1@FANCA | ||
}} | }} |
Latest revision as of 12:42, 18 September 2015
Short description: | p1@FANCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FANCA_5end |
Coexpression cluster: | C1675_Hodgkin_Burkitt_retinoblastoma_Reticulocytes_granulocyte_diffuse_MCF7 |
Association with transcript: | 0bp_to_ENST00000389301, ENST00000389302, ENST00000534992, ENST00000543736, NM_000135, NM_001018112, uc002fou.1, uc002fov.1, uc002fow.1, uc002fox.1, uc002foy.2, uc010ciu.1, uc010vpn.1_5end |
EntrezGene: | FANCA |
HGNC: | 3582 |
UniProt: | O15360F5H8D5Q0VAP4Q86U55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.66e-18 | 253 |
embryonic cell | 5.06e-07 | 250 |
neural cell | 9.44e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.32e-39 | 235 |
disease of cellular proliferation | 5.79e-38 | 239 |
organ system cancer | 9.41e-22 | 137 |
cell type cancer | 1.46e-20 | 143 |
hematologic cancer | 2.19e-18 | 51 |
immune system cancer | 2.19e-18 | 51 |
carcinoma | 7.34e-18 | 106 |
leukemia | 1.38e-14 | 39 |
myeloid leukemia | 1.47e-11 | 31 |