FFCP PHASE1:Hg19::chr19:44306590..44306614,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:44306590..44306614,-
|short_description=p2@LYPD5
|description=CAGE_peak_2_at_LYPD5_5end
|association_with_transcript=0bp_to_ENST00000377950,NM_001031749,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284348 | |EntrezGene=284348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26397 | |HGNC=26397 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWN5 | |UniProt=Q6UWN5 | ||
|association_with_transcript=0bp_to_ENST00000377950,NM_001031749,uc002oxm.3_5end | |||
|cluster_id=chr19:44306590..44306614,- | |||
|description=CAGE_peak_2_at_LYPD5_5end | |||
|id=chr19:44306590..44306614,- | |||
|ontology_enrichment_celltype=CL:0002159!4.40e-13!13;CL:0002076!6.55e-13!43;CL:0000622!4.26e-12!5;CL:0000154!5.58e-10!6;CL:0000150!8.94e-09!9;CL:0000223!4.54e-08!59;CL:0002623!8.28e-08!3;CL:0000362!2.64e-07!8;CL:0002077!4.13e-07!33;CL:0002328!4.34e-07!3;CL:0002251!5.42e-07!21;CL:0002368!7.26e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000622;3.27e-29;5!CL:0000154;2.52e-24;6!CL:0002159;6.18e-20;14!CL:0002623;6.17e-18;3!CL:0000362;3.50e-16;9!CL:0000150;3.67e-16;9!CL:0000575;3.09e-13;2!CL:0000317;4.56e-13;2!CL:1000448;4.56e-13;2!CL:0002308;4.56e-13;2!CL:0002140;4.56e-13;2!CL:0000312;5.36e-11;5!CL:0002251;7.64e-10;20!CL:0000240;3.04e-09;6!CL:0000311;3.04e-09;6!CL:0000079;3.04e-09;6!CL:0000237;3.04e-09;6!CL:0002077;3.52e-09;34!CL:0002621;8.57e-09;3!CL:0002252;7.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.91e-29,5;CL:0000154,2.29e-24,6;CL:0002159,7.03e-20,14;CL:0002623,5.66e-18,3;CL:0000150,3.45e-16,9;CL:0000362,4.04e-16,9;CL:0000575,3.09e-13,2;CL:0000317,4.42e-13,2;CL:1000448,4.42e-13,2;CL:0002308,4.42e-13,2;CL:0002140,4.42e-13,2;CL:0000312,6.36e-11,5;CL:0002077,5.75e-10,34;CL:0002251,6.66e-10,20;CL:0000240,3.51e-09,6;CL:0000311,3.51e-09,6;CL:0000079,3.51e-09,6;CL:0000237,3.51e-09,6;CL:0000036,3.51e-09,6;CL:0000357,3.51e-09,6;CL:0000114,3.51e-09,6;CL:0002621,8.09e-09,3;CL:0002252,5.78e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;3.04e-09;6!CL:0000114;3.04e-09;6!UBERON:0003124;1.45e-07;1!UBERON:0000358;4.84e-07;1!UBERON:0004874;4.84e-07;1!UBERON:0009143;7.95e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.84e-07;1!DOID:3149;4.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.45e-07,1;DOID:3149,5.45e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000064!9.64e-09!219;UBERON:0004121!2.92e-07!169;UBERON:0004815!4.34e-07!3;UBERON:0002031!4.34e-07!3;UBERON:0003978!5.23e-07!3;UBERON:0009751!5.23e-07!3;UBERON:0000946!5.23e-07!3;UBERON:0002523!5.23e-07!3;UBERON:0005983!5.23e-07!3;UBERON:0002165!5.23e-07!3;UBERON:0002062!5.23e-07!3;UBERON:0007280!5.23e-07!3;UBERON:0000924!6.73e-07!173;UBERON:0006601!6.73e-07!173;UBERON:0001004!7.29e-07!72;UBERON:0007023!8.30e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.07e-13;15!UBERON:0007376;1.07e-13;15!UBERON:0002419;4.56e-13;2!UBERON:0007771;4.56e-13;2!UBERON:0003297;4.56e-13;2!UBERON:0001821;4.56e-13;2!UBERON:0003487;4.56e-13;2!UBERON:0001820;4.56e-13;2!UBERON:0000165;3.34e-12;28!UBERON:0010371;6.96e-11;31!UBERON:0000161;1.87e-10;19!UBERON:0000166;1.87e-10;19!UBERON:0001041;6.02e-10;14!UBERON:0001044;3.17e-09;6!UBERON:0003293;3.17e-09;6!UBERON:0003294;3.17e-09;6!UBERON:0010047;3.17e-09;6!UBERON:0003408;3.17e-09;6!UBERON:0000167;3.17e-09;6!UBERON:0001723;4.49e-09;3!UBERON:0001033;4.49e-09;3!UBERON:0001949;8.57e-09;3!UBERON:0001043;2.74e-08;3!UBERON:0007029;1.64e-07;1!UBERON:0005795;3.30e-07;1!UBERON:0000033;4.16e-07;50!UBERON:0002372;4.84e-07;1!UBERON:0000989;4.84e-07;1!UBERON:0008811;4.84e-07;1!UBERON:0001961;4.84e-07;1!UBERON:0001744;4.84e-07;1!UBERON:0001042;4.84e-07;1!UBERON:0001735;4.84e-07;1!UBERON:0000964;5.00e-07;4!UBERON:0010409;5.00e-07;4!UBERON:0000014;7.52e-07;4!UBERON:0002135;7.95e-07;1!UBERON:0003102;8.36e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,6.94e-16,22;UBERON:0001003,1.18e-13,15;UBERON:0007376,1.18e-13,15;UBERON:0007383,1.18e-13,15;UBERON:0003102,1.72e-13,99;UBERON:0002419,4.42e-13,2;UBERON:0007771,4.42e-13,2;UBERON:0003297,4.42e-13,2;UBERON:0001821,4.42e-13,2;UBERON:0003487,4.42e-13,2;UBERON:0001820,4.42e-13,2;UBERON:0005089,4.42e-13,2;UBERON:0005088,4.42e-13,2;UBERON:0000165,9.27e-12,29;UBERON:0000930,9.27e-12,29;UBERON:0001444,3.04e-10,49;UBERON:0001044,3.04e-09,6;UBERON:0003293,3.04e-09,6;UBERON:0003294,3.04e-09,6;UBERON:0010047,3.04e-09,6;UBERON:0000167,3.04e-09,6;UBERON:0000161,3.08e-09,36;UBERON:0001723,4.49e-09,3;UBERON:0001033,4.49e-09,3;UBERON:0010056,4.49e-09,3;UBERON:0001949,8.09e-09,3;UBERON:0000033,9.69e-09,56;UBERON:0001043,1.96e-08,3;UBERON:0009143,1.96e-08,3;UBERON:0000153,1.01e-07,62;UBERON:0007811,1.01e-07,62;UBERON:0007029,1.65e-07,1;UBERON:0001004,2.48e-07,74;UBERON:0000989,4.57e-07,1;UBERON:0008811,4.57e-07,1;UBERON:0006258,4.57e-07,1;UBERON:0005876,4.57e-07,1;UBERON:0004874,4.57e-07,1;UBERON:0004121,4.64e-07,171;UBERON:0000924,4.64e-07,171;UBERON:0006601,4.64e-07,171;UBERON:0002372,4.85e-07,1;UBERON:0001961,4.85e-07,1;UBERON:0001744,4.85e-07,1;UBERON:0001735,4.85e-07,1;UBERON:0000964,5.00e-07,4;UBERON:0010409,5.00e-07,4;UBERON:0004348,5.00e-07,4;UBERON:0005427,5.00e-07,4;UBERON:0002135,7.73e-07,1;UBERON:0000014,7.97e-07,4 | |||
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| ||
|short_description=p2@LYPD5 | |||
}} | }} |
Latest revision as of 12:33, 18 September 2015
Short description: | p2@LYPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LYPD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377950, NM_001031749, uc002oxm.3_5end |
EntrezGene: | LYPD5 |
HGNC: | 26397 |
UniProt: | Q6UWN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.91e-29 | 5 |
protein secreting cell | 2.29e-24 | 6 |
general ecto-epithelial cell | 7.03e-20 | 14 |
acinar cell of salivary gland | 5.66e-18 | 3 |
glandular epithelial cell | 3.45e-16 | 9 |
epidermal cell | 4.04e-16 | 9 |
corneal epithelial cell | 3.09e-13 | 2 |
sebum secreting cell | 4.42e-13 | 2 |
epithelial cell of sweat gland | 4.42e-13 | 2 |
epithelial cell of skin gland | 4.42e-13 | 2 |
acinar cell of sebaceous gland | 4.42e-13 | 2 |
keratinocyte | 6.36e-11 | 5 |
ecto-epithelial cell | 5.75e-10 | 34 |
epithelial cell of alimentary canal | 6.66e-10 | 20 |
stratified squamous epithelial cell | 3.51e-09 | 6 |
keratin accumulating cell | 3.51e-09 | 6 |
stratified epithelial cell | 3.51e-09 | 6 |
keratinizing barrier epithelial cell | 3.51e-09 | 6 |
epithelial fate stem cell | 3.51e-09 | 6 |
stratified epithelial stem cell | 3.51e-09 | 6 |
surface ectodermal cell | 3.51e-09 | 6 |
gingival epithelial cell | 8.09e-09 | 3 |
epithelial cell of esophagus | 5.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.45e-07 | 1 |
keratoacanthoma | 5.45e-07 | 1 |