FFCP PHASE1:Hg19::chr12:47617402..47617434,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91523 | |EntrezGene=91523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28255 | |HGNC=28255 | ||
|TSSclassifier=strong | |||
|UniProt=F8VYL8 | |UniProt=F8VYL8 | ||
|association_with_transcript=74bp_to_ENST00000551777_5end | |association_with_transcript=74bp_to_ENST00000551777_5end | ||
|cluster_id=chr12:47617402..47617434,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_8_at_FAM113B_5end | |description=CAGE_peak_8_at_FAM113B_5end | ||
|id=chr12:47617402..47617434,+ | |id=chr12:47617402..47617434,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.09e-12!5;CL:0000047!6.75e-07!8 | |ontology_enrichment_celltype=CL:0002322!3.09e-12!5;CL:0000047!6.75e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.78e-31;5!CL:0000039;8.09e-23;7!CL:0000586;8.09e-23;7!CL:0000540;7.57e-15;6!CL:0000404;7.57e-15;6!CL:0000785;1.15e-10;1!CL:0000819;1.15e-10;1!CL:0002321;2.01e-10;15!CL:0000148;3.65e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.20e-31,5;CL:0000039,8.10e-23,7;CL:0000586,8.10e-23,7;CL:0000540,6.41e-15,6;CL:0000031,6.41e-15,6;CL:0000404,6.41e-15,6;CL:0000047,2.48e-11,8;CL:0000819,1.21e-10,1;CL:0000148,3.31e-09,10;CL:0000541,3.31e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-24;10!UBERON:0005564;2.73e-24;10!CL:0000031;7.57e-15;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;1.40e-19;2!DOID:630;3.76e-11;1!DOID:0050177;3.76e-11;1!DOID:0050427;3.76e-11;1!DOID:3095;5.43e-11;22!DOID:2994;5.43e-11;22!DOID:0060073;1.15e-10;1!DOID:8675;1.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.48e-19,2;DOID:630,3.76e-11,1;DOID:0050177,3.76e-11,1;DOID:0050427,3.76e-11,1;DOID:3095,5.98e-11,22;DOID:2994,5.98e-11,22;DOID:0060073,1.21e-10,1;DOID:8675,1.21e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.19e-10!8;UBERON:0003135!3.64e-09!11;UBERON:0000991!1.11e-08!21;UBERON:0009196!1.11e-08!21;UBERON:0009117!1.11e-08!21;UBERON:0005564!1.11e-08!21;UBERON:0004176!3.50e-08!22 | |ontology_enrichment_uberon=UBERON:0000473!6.19e-10!8;UBERON:0003135!3.64e-09!11;UBERON:0000991!1.11e-08!21;UBERON:0009196!1.11e-08!21;UBERON:0009117!1.11e-08!21;UBERON:0005564!1.11e-08!21;UBERON:0004176!3.50e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.30e-20;8!UBERON:0003135;1.29e-14;11!UBERON:0000991;1.60e-11;21!UBERON:0004913;1.15e-10;1!UBERON:0003703;1.15e-10;1!UBERON:0001174;1.15e-10;1!UBERON:0004914;1.15e-10;1!UBERON:0000922;1.38e-10;49!UBERON:0003101;2.19e-07;22!UBERON:0000079;2.19e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.30e-20,8;UBERON:0003135,1.29e-14,11;UBERON:0000991,1.77e-11,21;UBERON:0009196,1.77e-11,21;UBERON:0009117,1.77e-11,21;UBERON:0005564,1.77e-11,21;UBERON:0004176,5.98e-11,22;UBERON:0004913,1.61e-10,1;UBERON:0003703,1.61e-10,1;UBERON:0001174,1.61e-10,1;UBERON:0004914,1.61e-10,1;UBERON:0003101,2.19e-07,22;UBERON:0000079,2.19e-07,22;UBERON:0002323,4.11e-07,46 | |||
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| ||
|short_description=p8@FAM113B | |short_description=p8@FAM113B | ||
}} | }} |
Latest revision as of 12:32, 18 September 2015
Short description: | p8@FAM113B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FAM113B_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 74bp_to_ENST00000551777_5end |
EntrezGene: | FAM113B |
HGNC: | 28255 |
UniProt: | F8VYL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.20e-31 | 5 |
germ line cell | 8.10e-23 | 7 |
germ cell | 8.10e-23 | 7 |
neuron | 6.41e-15 | 6 |
neuroblast | 6.41e-15 | 6 |
electrically signaling cell | 6.41e-15 | 6 |
neuronal stem cell | 2.48e-11 | 8 |
B-1 B cell | 1.21e-10 | 1 |
melanocyte | 3.31e-09 | 10 |
melanoblast | 3.31e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 5.30e-20 | 8 |
male reproductive organ | 1.29e-14 | 11 |
gonad | 1.77e-11 | 21 |
indifferent external genitalia | 1.77e-11 | 21 |
indifferent gonad | 1.77e-11 | 21 |
gonad primordium | 1.77e-11 | 21 |
external genitalia | 5.98e-11 | 22 |
hepatopancreatic ampulla | 1.61e-10 | 1 |
extrahepatic bile duct | 1.61e-10 | 1 |
common bile duct | 1.61e-10 | 1 |
duodenal papilla | 1.61e-10 | 1 |
male organism | 2.19e-07 | 22 |
male reproductive system | 2.19e-07 | 22 |
body cavity | 4.11e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.48e-19 | 2 |
genetic disease | 3.76e-11 | 1 |
monogenic disease | 3.76e-11 | 1 |
xeroderma pigmentosum | 3.76e-11 | 1 |
germ cell and embryonal cancer | 5.98e-11 | 22 |
germ cell cancer | 5.98e-11 | 22 |
lymphatic system cancer | 1.21e-10 | 1 |
lymphosarcoma | 1.21e-10 | 1 |