FFCP PHASE1:Hg19::chr19:44306567..44306574,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:44306567..44306574,-
|short_description=p7@LYPD5
|description=CAGE_peak_7_at_LYPD5_5end
|association_with_transcript=38bp_to_ENST00000377950,NM_001031749,...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284348 | |EntrezGene=284348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26397 | |HGNC=26397 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWN5 | |UniProt=Q6UWN5 | ||
|association_with_transcript=38bp_to_ENST00000377950,NM_001031749,uc002oxm.3_5end | |||
|cluster_id=chr19:44306567..44306574,- | |||
|description=CAGE_peak_7_at_LYPD5_5end | |||
|id=chr19:44306567..44306574,- | |||
|ontology_enrichment_celltype=CL:0000622!2.00e-30!5;CL:0000154!2.46e-25!6;CL:0002159!7.07e-22!13;CL:0002623!8.57e-19!3;CL:0000362!1.69e-18!8;CL:0000150!7.77e-17!9;CL:0000317!2.00e-13!2;CL:1000448!2.00e-13!2;CL:0002308!2.00e-13!2;CL:0000575!2.00e-13!2;CL:0002140!2.00e-13!2;CL:0000312!4.79e-11!5;CL:0002077!1.58e-10!33;CL:0000240!2.75e-09!6;CL:0000311!2.75e-09!6;CL:0000079!2.75e-09!6;CL:0000237!2.75e-09!6;CL:0000036!2.75e-09!6;CL:0000357!2.75e-09!6;CL:0000114!2.75e-09!6;CL:0002621!5.19e-09!3;CL:0002251!5.36e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000575;1.18e-36;2!CL:0000317;2.04e-36;2!CL:1000448;2.04e-36;2!CL:0002308;2.04e-36;2!CL:0002140;2.04e-36;2!CL:0000622;5.98e-33;5!CL:0002159;7.42e-32;14!CL:0000154;1.34e-27;6!CL:0000150;1.17e-18;9!CL:0000362;1.90e-18;9!CL:0002077;5.58e-17;34!CL:0002623;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.18e-36,2;CL:1000448,1.18e-36,2;CL:0002308,1.18e-36,2;CL:0000575,1.18e-36,2;CL:0002140,1.18e-36,2;CL:0000622,4.31e-33,5;CL:0002159,6.96e-32,14;CL:0000154,1.02e-27,6;CL:0002077,9.28e-19,34;CL:0000150,9.79e-19,9;CL:0000362,1.79e-18,9;CL:0000221,1.49e-08,72;CL:0002623,1.82e-07,3;CL:0000076,3.59e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.71e-19;1!UBERON:0008814;1.72e-10;2!UBERON:0010056;1.72e-10;2 | |||
|ontology_enrichment_disease=DOID:3151!2.23e-07!1;DOID:3149!2.23e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!2.17e-17!21;UBERON:0001003!5.47e-15!14;UBERON:0007376!5.47e-15!14;UBERON:0007383!5.47e-15!14;UBERON:0003102!8.30e-15!95;UBERON:0002419!2.00e-13!2;UBERON:0007771!2.00e-13!2;UBERON:0003297!2.00e-13!2;UBERON:0001821!2.00e-13!2;UBERON:0003487!2.00e-13!2;UBERON:0001820!2.00e-13!2;UBERON:0005089!2.00e-13!2;UBERON:0005088!2.00e-13!2;UBERON:0000165!9.67e-13!28;UBERON:0000930!9.67e-13!28;UBERON:0000078!1.02e-11!18;UBERON:0001444!6.40e-11!48;UBERON:0000161!5.96e-10!35;UBERON:0001044!1.18e-09!6;UBERON:0003293!1.18e-09!6;UBERON:0003294!1.18e-09!6;UBERON:0010047!1.18e-09!6;UBERON:0000167!1.18e-09!6;UBERON:0001723!2.22e-09!3;UBERON:0001033!2.22e-09!3;UBERON:0010056!2.22e-09!3;UBERON:0005795!4.01e-09!22;UBERON:0001949!5.19e-09!3;UBERON:0007029!1.06e-07!1;UBERON:0002372!2.67e-07!1;UBERON:0001961!2.67e-07!1;UBERON:0001744!2.67e-07!1;UBERON:0001735!2.67e-07!1;UBERON:0000989!3.02e-07!1;UBERON:0008811!3.02e-07!1;UBERON:0006258!3.02e-07!1;UBERON:0005876!3.02e-07!1;UBERON:0004874!3.02e-07!1;UBERON:0000964!3.97e-07!4;UBERON:0004348!3.97e-07!4;UBERON:0005427!3.97e-07!4;UBERON:0000014!4.09e-07!4;UBERON:0006834!5.19e-07!1;UBERON:0001987!6.22e-07!4;UBERON:0004340!6.22e-07!4;UBERON:0000995!8.67e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.04e-36;2!UBERON:0007771;2.04e-36;2!UBERON:0003297;2.04e-36;2!UBERON:0001821;2.04e-36;2!UBERON:0003487;2.04e-36;2!UBERON:0001820;2.04e-36;2!UBERON:0001723;3.18e-25;3!UBERON:0001033;3.18e-25;3!UBERON:0007029;1.08e-19;1!UBERON:0001003;1.76e-19;15!UBERON:0007376;1.76e-19;15!UBERON:0000964;6.77e-19;4!UBERON:0010409;6.77e-19;4!UBERON:0000020;6.21e-13;23!UBERON:0001032;2.07e-12;24!UBERON:0004456;2.07e-12;24!UBERON:0003102;4.39e-11;50!UBERON:0010371;1.55e-09;31!UBERON:0010313;3.90e-08;10!UBERON:0002097;3.94e-07;41!UBERON:0000033;8.53e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.18e-36,2;UBERON:0007771,1.18e-36,2;UBERON:0003297,1.18e-36,2;UBERON:0001821,1.18e-36,2;UBERON:0003487,1.18e-36,2;UBERON:0001820,1.18e-36,2;UBERON:0005089,1.18e-36,2;UBERON:0005088,1.18e-36,2;UBERON:0001723,2.99e-25,3;UBERON:0001033,2.99e-25,3;UBERON:0010056,2.99e-25,3;UBERON:0007029,1.08e-19,1;UBERON:0001003,1.68e-19,15;UBERON:0007376,1.68e-19,15;UBERON:0007383,1.68e-19,15;UBERON:0000964,6.77e-19,4;UBERON:0010409,6.77e-19,4;UBERON:0004348,6.77e-19,4;UBERON:0005427,6.77e-19,4;UBERON:0003102,3.20e-14,99;UBERON:0000020,2.04e-12,24;UBERON:0001032,2.04e-12,24;UBERON:0004456,2.04e-12,24;UBERON:0005085,1.31e-09,31;UBERON:0001444,2.35e-09,49;UBERON:0001042,2.92e-08,10;UBERON:0009145,2.92e-08,10;UBERON:0000033,3.45e-08,56;UBERON:0010313,3.90e-08,10;UBERON:0002342,3.90e-08,10;UBERON:0005062,3.90e-08,10;UBERON:0000166,4.03e-08,22;UBERON:0004121,8.16e-08,171;UBERON:0000924,8.16e-08,171;UBERON:0006601,8.16e-08,171;UBERON:0006562,1.37e-07,11;UBERON:0000153,2.14e-07,62;UBERON:0007811,2.14e-07,62;UBERON:0002097,2.39e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,3.01588058552972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.51215543128185,9.67763526539729,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25708688200537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,5.87835219321796,3.08009970976753,0.5388164241167,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,3.01588058552972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.51215543128185,9.67763526539729,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25708688200537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,5.87835219321796,3.08009970976753,0.5388164241167,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | ||
|short_description=p7@LYPD5 | |||
}} | }} |
Latest revision as of 12:32, 18 September 2015
Short description: | p7@LYPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LYPD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000377950, NM_001031749, uc002oxm.3_5end |
EntrezGene: | LYPD5 |
HGNC: | 26397 |
UniProt: | Q6UWN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.18e-36 | 2 |
epithelial cell of sweat gland | 1.18e-36 | 2 |
epithelial cell of skin gland | 1.18e-36 | 2 |
corneal epithelial cell | 1.18e-36 | 2 |
acinar cell of sebaceous gland | 1.18e-36 | 2 |
acinar cell | 4.31e-33 | 5 |
general ecto-epithelial cell | 6.96e-32 | 14 |
protein secreting cell | 1.02e-27 | 6 |
ecto-epithelial cell | 9.28e-19 | 34 |
glandular epithelial cell | 9.79e-19 | 9 |
epidermal cell | 1.79e-18 | 9 |
ectodermal cell | 1.49e-08 | 72 |
acinar cell of salivary gland | 1.82e-07 | 3 |
squamous epithelial cell | 3.59e-07 | 63 |