FFCP PHASE1:Hg19::chr21:42540033..42540062,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000544566_5end | |||
|cluster_id=chr21:42540033..42540062,+ | |||
|coexpression_cluster_id=C4078 | |||
|description=CAGE_peak_2_at_BACE2_5end | |||
|id=chr21:42540033..42540062,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-21!254;CL:0000222!1.19e-16!119;CL:0000220!1.19e-15!246;CL:0002321!2.45e-15!248;CL:0002139!1.28e-12!24;CL:0000213!2.37e-12!57;CL:0000215!2.37e-12!57;CL:0002078!2.51e-12!44;CL:0000115!4.45e-11!35;CL:0000076!7.70e-09!62;CL:0000071!9.76e-09!18;CL:0002546!9.76e-09!18;CL:0000055!3.28e-08!180;CL:0000075!3.74e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.64e-13;24!CL:0000115;2.62e-10;36!CL:0002078;2.43e-09;45!CL:0000071;4.52e-09;18!CL:0000213;3.60e-08;58!CL:0000215;3.60e-08;58!CL:0000075;3.67e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.40e-22,253;CL:0000222,2.09e-17,121;CL:0002321,8.47e-17,250;CL:0000213,1.63e-13,58;CL:0000215,1.63e-13,58;CL:0002078,1.78e-13,45;CL:0002139,5.41e-13,24;CL:0000115,3.15e-12,36;CL:0000071,5.11e-09,18;CL:0002546,5.11e-09,18;CL:0000076,1.15e-08,63;CL:0000075,2.81e-07,27 | |||
|ontology_enrichment_development_v019=CL:0002546;4.52e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.19e-18!79;UBERON:0007798!6.19e-18!79;UBERON:0000055!6.87e-17!69;UBERON:0004872!8.36e-15!84;UBERON:0001981!1.55e-14!60;UBERON:0007500!1.55e-14!60;UBERON:0004537!1.55e-14!60;UBERON:0006965!1.55e-14!60;UBERON:0003914!1.95e-14!118;UBERON:0000477!2.89e-13!286;UBERON:0004535!3.03e-12!110;UBERON:0000119!5.91e-12!312;UBERON:0001009!8.89e-12!113;UBERON:0000483!1.05e-11!309;UBERON:0001637!2.68e-10!42;UBERON:0003509!2.68e-10!42;UBERON:0004572!2.68e-10!42;UBERON:0003104!1.91e-09!238;UBERON:0009142!1.91e-09!238;UBERON:0004111!3.07e-09!241;UBERON:0004573!4.15e-09!33;UBERON:0004571!4.15e-09!33;UBERON:0000481!4.32e-09!347;UBERON:0001986!9.76e-09!18;UBERON:0004638!9.76e-09!18;UBERON:0004852!9.76e-09!18;UBERON:0001048!1.70e-08!168;UBERON:0000468!1.77e-08!659;UBERON:0006914!7.96e-08!25;UBERON:0000490!8.90e-08!138;UBERON:0000063!1.27e-07!97;UBERON:0002100!1.33e-07!216;UBERON:0003103!1.50e-07!69;UBERON:0000487!1.89e-07!22;UBERON:0000064!2.22e-07!219;UBERON:0001737!2.85e-07!9;UBERON:0000467!6.74e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;2.14e-09;65!UBERON:0004638;4.52e-09;18!UBERON:0001986;4.52e-09;18!UBERON:0004852;4.52e-09;18!UBERON:0004573;7.54e-09;33!UBERON:0004571;7.54e-09;33!UBERON:0001637;1.27e-08;42!UBERON:0003509;1.27e-08;42!UBERON:0004572;1.27e-08;42!UBERON:0007500;2.86e-08;56!UBERON:0001981;2.86e-08;56!UBERON:0004537;2.86e-08;56!UBERON:0002049;3.46e-08;75!UBERON:0007798;3.46e-08;75!UBERON:0006914;3.78e-08;25!UBERON:0003914;4.83e-08;74!UBERON:0000487;8.19e-08;22!UBERON:0001737;2.00e-07;9!UBERON:0001557;2.00e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.73e-18,78;UBERON:0007798,1.73e-18,78;UBERON:0000055,1.57e-17,68;UBERON:0003914,3.47e-15,117;UBERON:0004872,4.30e-15,83;UBERON:0007500,4.97e-15,59;UBERON:0001981,4.97e-15,59;UBERON:0004537,4.97e-15,59;UBERON:0006965,4.97e-15,59;UBERON:0004535,4.10e-12,109;UBERON:0001009,1.46e-11,112;UBERON:0001637,1.72e-10,42;UBERON:0003509,1.72e-10,42;UBERON:0004572,1.72e-10,42;UBERON:0000119,1.04e-09,309;UBERON:0001048,1.70e-09,160;UBERON:0000483,1.75e-09,306;UBERON:0004573,2.83e-09,33;UBERON:0004571,2.83e-09,33;UBERON:0004638,5.11e-09,18;UBERON:0001986,5.11e-09,18;UBERON:0004852,5.11e-09,18;UBERON:0006914,3.69e-08,25;UBERON:0003103,6.65e-08,68;UBERON:0000487,8.77e-08,22;UBERON:0002100,1.51e-07,199;UBERON:0004111,1.97e-07,240;UBERON:0001737,2.13e-07,9;UBERON:0000490,3.92e-07,148 | |||
|phase1_expression=4.36028110249336,2.78330681058278,4.65149533516705,6.00439790118782,4.46961094427288,3.48935409640147,2.53299878168311,6.31719873426831,4.96252693579693,6.88055022204225,11.8626198555313,4.15038607047327,8.96807725976742,5.44571953024205,11.5989081504771,2.6893005858071,6.02694528023977,5.84248072309899,4.87932798790507,5.54044761345546,13.8720470046092,15.6727360739044,4.86601178122796,3.96935832711364,5.64941878176613,0.0764134057479513,0,0,1.96682138424452,0.383829398097213,0.309632246632152,5.51652734687356,12.3494426699083,11.8321283253372,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,3.82297027883492,2.66852776159066,2.98711155796555,4.80475184443215,2.29900975981793,2.64417949113945,1.90810750907073,1.1384259382189,1.76171156811282,2.29363936875137,0,0.560508562981536,0.526768169550154,0.196709770113833,0,0.205601498999509,0.334372990781356,0,0,0,3.23090324967003,0,0,0,0.512365278902701,1.04047478047903,0.657751618414705,1.10540007114339,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,10.612592633013,6.14446559053763,5.0133791063589,7.82171202388448,3.1811437882044,4.86634870302636,6.42836756715661,7.53879951372717,4.21606971327005,2.0956652079634,24.7720796038929,10.381964397964,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,16.8948046261699,17.2046919021225,12.844198559481,10.7408508965562,11.3264847776675,15.1314923067037,12.121708059135,46.2565998913099,30.9516648537438,30.459575761585,22.5584417581122,18.2465305372443,46.127728876604,11.3975554907219,14.5825550618717,9.10857228497614,10.1038217681776,13.625989138482,0,11.3911879148175,15.755349978015,0,0,10.9023513035634,1.49091585508596,8.99076632818516,3.31022952033047,6.02356903572509,9.930714701554,3.36406560085384,3.20246987189115,8.88003174301776,5.29058760179603,7.67850830797222,3.10577615915572,4.38936540170301,2.30470369792,4.68642863667593,0.312160076830321,1.71141546463335,1.04614076386261,4.22764195117554,3.56120477609889,3.65172097425846,1.22492502752936,5.03620700978249,2.6864703105699,4.75201142912821,2.22540236350701,1.82032272387605,5.74894513452991,3.19838616512726,2.87772595705518,1.38532057742091,2.63386572528503,2.14541457059314,4.8076178850111,3.28953331164061,2.33206526395521,5.97960688691989,3.17897851739343,6.60200411385685,5.04957393268351,1.28820270022815,5.02515512095292,5.06328996723799,5.26159827870473,2.27190396819703,4.60249493211497,4.84938170456436,4.9701342952326,3.82857973265033,3.39121184620975,6.57086900755209,6.2731607735892,8.31733326628111,1.82960559194393,1.59035721985782,2.09149097165133,1.86589899027667,1.51392510525377,3.28479623168247,3.12899064659632,8.36213219650751,2.76269842704961,0,0,27.8020980093633,19.2186546689036,19.2808823906786,25.1470257829858,24.6203771824419,18.5071082906655,29.3932251789158,19.4259250474093,20.7763464751051,24.3591300026134,8.41450642820675,7.4083322039652,5.88034845542168,0,0,3.54473944008842,0,0.860919069801795,13.5538570135835,7.46301940778654,5.62008766288098,8.64549162740025,10.0921405222797,4.56131627434455,8.31947828223663,5.77325368101093,8.57884996815569,10.3319650927523,22.6655322984886,39.8167540815885,33.6749849455239,3.1608175918371,1.71697232418975,0.246217006087397,0.234004265139238,0.148631162288728,4.68669169933885,4.70349958956807,4.11147782002921,6.44821363460508,6.39394664730716,19.935899316591,8.86793828212698,37.772778191674,26.9526550203004,23.3474324535477,38.2514573281931,18.6048830276055,27.503166640196,23.4434894420094,13.6857956818164,18.5089486865982,18.6212695863229,16.5779330925735,4.82163662685051,7.41132117016576,2.933531432838,5.17086863031111,3.57656445851882,5.071816515336,3.19125739901845,5.2003718455683,2.31486636835928,2.83698264046557,1.8649552531127,2.00169191121407,4.34097284313154,0.823240336780769,4.88604276440603,2.48774364119782,3.16780749173372,4.52159065589379,10.4584015032035,5.79843348855931,0,0.502257091432126,0,3.11512312139057,4.59447743336456,5.70547620162874,3.61953266668948,5.34238438630997,7.52056045607561,0,0,0,0.128343036279748,3.30323011489202,0,0,2.51274398001523,0,1.49801404789436,0,0.414415513436035,10.1833938126886,2.00068208423871,4.06897535549603,8.52680532276309,5.88815663030634,4.73107245101804,3.74852527976682,14.1444666872028,18.1926003244788,10.3473071292505,4.64957918974806,9.58719676416856,1.12948698808508,5.67823356641948,4.46086450954113,0,0.215714200818617,0,4.24378600024763,3.32870879020994,5.44302527993425,4.46594054073798,3.37616341233737,4.77122160536225,6.40695746278505,5.11707249066703,5.14732547659544,0,4.00945203886904,6.74734556189883,3.53146770859379,2.59627214591811,4.18357362455853,0.362578348774867,11.228362336984,12.430933506346,0.68888668898764,0,0.917870904715969,9.92639148396306,7.85556438465031,10.1965469992991,4.38417673959782,6.12199447578679,6.8240030442538,15.9888082959925,3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| |||
|short_description=p2@BACE2 | |||
}} |
Latest revision as of 12:19, 18 September 2015
Short description: | p2@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BACE2_5end |
Coexpression cluster: | C4078_Mast_Endothelial_Lymphatic_Melanocyte_melanoma_Hep2_Hepatic |
Association with transcript: | 0bp_to_ENST00000544566_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.40e-22 | 253 |
mesodermal cell | 2.09e-17 | 121 |
embryonic cell | 8.47e-17 | 250 |
lining cell | 1.63e-13 | 58 |
barrier cell | 1.63e-13 | 58 |
meso-epithelial cell | 1.78e-13 | 45 |
endothelial cell of vascular tree | 5.41e-13 | 24 |
endothelial cell | 3.15e-12 | 36 |
blood vessel endothelial cell | 5.11e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.11e-09 | 18 |
squamous epithelial cell | 1.15e-08 | 63 |
columnar/cuboidal epithelial cell | 2.81e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.73e-18 | 78 |
vascular system | 1.73e-18 | 78 |
vessel | 1.57e-17 | 68 |
epithelial tube | 3.47e-15 | 117 |
splanchnic layer of lateral plate mesoderm | 4.30e-15 | 83 |
epithelial tube open at both ends | 4.97e-15 | 59 |
blood vessel | 4.97e-15 | 59 |
blood vasculature | 4.97e-15 | 59 |
vascular cord | 4.97e-15 | 59 |
cardiovascular system | 4.10e-12 | 109 |
circulatory system | 1.46e-11 | 112 |
artery | 1.72e-10 | 42 |
arterial blood vessel | 1.72e-10 | 42 |
arterial system | 1.72e-10 | 42 |
cell layer | 1.04e-09 | 309 |
primordium | 1.70e-09 | 160 |
epithelium | 1.75e-09 | 306 |
systemic artery | 2.83e-09 | 33 |
systemic arterial system | 2.83e-09 | 33 |
blood vessel endothelium | 5.11e-09 | 18 |
endothelium | 5.11e-09 | 18 |
cardiovascular system endothelium | 5.11e-09 | 18 |
squamous epithelium | 3.69e-08 | 25 |
compound organ | 6.65e-08 | 68 |
simple squamous epithelium | 8.77e-08 | 22 |
trunk | 1.51e-07 | 199 |
anatomical conduit | 1.97e-07 | 240 |
larynx | 2.13e-07 | 9 |
unilaminar epithelium | 3.92e-07 | 148 |