FFCP PHASE1:Hg19::chr5:67576171..67576193,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5295 | |EntrezGene=5295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8979 | |HGNC=8979 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHI0 | |UniProt=E5RHI0 | ||
|association_with_transcript=36bp_to_ENST00000522084_5end | |association_with_transcript=36bp_to_ENST00000522084_5end | ||
|cluster_id=chr5:67576171..67576193,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_3_at_PIK3R1_5end | |description=CAGE_peak_3_at_PIK3R1_5end | ||
|id=chr5:67576171..67576193,+ | |id=chr5:67576171..67576193,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.50e-31!140;CL:0000084!8.56e-24!25;CL:0000827!8.56e-24!25;CL:0002087!8.81e-23!119;CL:0000791!2.83e-22!18;CL:0000789!2.83e-22!18;CL:0002420!2.83e-22!18;CL:0002419!2.83e-22!18;CL:0000790!2.83e-22!18;CL:0000037!4.75e-21!172;CL:0000566!4.75e-21!172;CL:0002031!3.93e-20!124;CL:0000988!8.59e-20!182;CL:0002032!1.42e-17!165;CL:0000837!1.42e-17!165;CL:0000838!1.22e-16!52;CL:0000542!4.12e-16!53;CL:0000051!4.12e-16!53;CL:0000625!1.74e-14!11;CL:0000766!4.26e-11!76;CL:0000094!4.72e-10!8;CL:0000624!4.79e-09!6;CL:0002057!2.60e-08!42;CL:0000860!2.49e-07!45 | |ontology_enrichment_celltype=CL:0000738!7.50e-31!140;CL:0000084!8.56e-24!25;CL:0000827!8.56e-24!25;CL:0002087!8.81e-23!119;CL:0000791!2.83e-22!18;CL:0000789!2.83e-22!18;CL:0002420!2.83e-22!18;CL:0002419!2.83e-22!18;CL:0000790!2.83e-22!18;CL:0000037!4.75e-21!172;CL:0000566!4.75e-21!172;CL:0002031!3.93e-20!124;CL:0000988!8.59e-20!182;CL:0002032!1.42e-17!165;CL:0000837!1.42e-17!165;CL:0000838!1.22e-16!52;CL:0000542!4.12e-16!53;CL:0000051!4.12e-16!53;CL:0000625!1.74e-14!11;CL:0000766!4.26e-11!76;CL:0000094!4.72e-10!8;CL:0000624!4.79e-09!6;CL:0002057!2.60e-08!42;CL:0000860!2.49e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.90e-33;25!CL:0000791;3.24e-32;18!CL:0000789;3.24e-32;18!CL:0002419;3.24e-32;18!CL:0000625;2.04e-22;11!CL:0000094;2.99e-15;8!CL:0000624;1.23e-13;6!CL:0000542;9.32e-12;53!CL:0000081;1.24e-10;11!CL:0000898;1.05e-07;3!CL:0000623;1.99e-07;3!CL:0000226;3.19e-07;3!CL:0000842;3.19e-07;3!CL:0000767;4.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.59e-33,25;CL:0000827,8.59e-33,25;CL:0000791,3.23e-32,18;CL:0000789,3.23e-32,18;CL:0002420,3.23e-32,18;CL:0002419,3.23e-32,18;CL:0000790,3.23e-32,18;CL:0000738,1.05e-22,136;CL:0000625,2.03e-22,11;CL:0000838,6.03e-22,52;CL:0000542,2.26e-21,53;CL:0000051,2.26e-21,53;CL:0000037,1.01e-15,168;CL:0002087,1.66e-15,115;CL:0000094,2.94e-15,8;CL:0000988,3.09e-14,177;CL:0000624,1.23e-13,6;CL:0002032,9.80e-12,161;CL:0000837,9.80e-12,161;CL:0002031,1.99e-11,120;CL:0000081,1.23e-10,11;CL:0000898,1.06e-07,3;CL:0000623,2.03e-07,3;CL:0000825,2.03e-07,3;CL:0000226,3.19e-07,3;CL:0000842,3.19e-07,3;CL:0000767,4.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.24e-32;18!CL:0000051;9.32e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-20!115;UBERON:0002390!2.04e-14!102;UBERON:0003061!2.04e-14!102;UBERON:0002193!2.21e-13!112;UBERON:0000178!2.23e-13!15;UBERON:0000179!2.23e-13!15;UBERON:0000463!2.23e-13!15 | |ontology_enrichment_uberon=UBERON:0007023!1.41e-20!115;UBERON:0002390!2.04e-14!102;UBERON:0003061!2.04e-14!102;UBERON:0002193!2.21e-13!112;UBERON:0000178!2.23e-13!15;UBERON:0000179!2.23e-13!15;UBERON:0000463!2.23e-13!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.39e-16;15!UBERON:0000179;1.39e-16;15!UBERON:0000463;1.39e-16;15!UBERON:0002390;1.26e-10;32!UBERON:0002193;2.49e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.32e-16,15;UBERON:0000179,1.32e-16,15;UBERON:0000463,1.32e-16,15;UBERON:0007023,1.72e-07,114;UBERON:0004177,8.14e-07,7;UBERON:0005057,8.14e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2274711980715,88.6645909604561,13.3141866051825,0,0,0,0,0,0,11.6339035791694,9.02450013615638,11.5015761479401,0.223915474239924,4.85840499028469,0.257575567634187,0.436194716338694,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,1.72372840368309,0.645484683583826,0,0.752969358170419,0.818718450173537,0.224723484445085,0.918251677112708,2.56743221660875,1.27867425159808,0,0,0,0.870627715885752,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,2.57794345191295,0.949387162322653,0,0,0,0,0,0,0,0,0,0,2.18455444504853,0,0,0,0,0,0,0.569212969109448,1.76171156811282,0.382273228125229,1.32171328579026,11.7706798226123,0,107.796954022381,47.9473130553981,96.8383060287688,7.18901930179916,107.228425722451,93.2692177297425,35.068811113424,9.58129929212493,147.892165552368,113.868421815981,132.423089381093,2.17755243533648,3.51160238411671,7.89301942097645,6.63240042686036,15.9391697154279,35.1439154694083,31.5698177145861,11.4989076185474,9.85791281468826,70.1293503291516,96.9029396261016,216.837876060714,47.1476813199663,37.1117568698159,45.621698133522,15.9609626222439,18.9420184508539,29.983374372563,45.4612323924512,44.3409118337365,111.488529003277,69.8018910994954,60.53660082301,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.458426764241994,0,0,0,0,0,1.19245312152671,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,8.38779888887836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,88.2697805704634,37.087942875837,49.2837259314234,0,0,0,0,0.637938751653163,5.24304916763028,11.966458368161,9.11714129559278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.3085833666542,16.8257076638521,34.2595460549056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,4.56702848308952,3.0585488285695,4.5571774973933,14.0556747520096,10.6954191002411,2.59389324477087,5.40031437238115,4.75875105776562,0,0,0,0,0,1.70740424036194,7.33360854552583,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.597743964753209,2.48655523978033,0,0,1.96935688737711,0,0,0,0,11.7385652707951,19.1586473877552,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0.123563938946503,0.208843899010911,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.969890164884194,0,0,0,0,0.126621591911757,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,2.89176089707246,0.279282401272254,0.229160424011684,0,0.199679000498991,0.858452096273142,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,1.26089131678717,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0.13223260174269,0,0,12.7077020955557,0.471612915298998,4.14239055347196,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.64477330057155,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0.971421986118279,0,0,0,0,0,0,2.9326180081019,0.218559560503957,0,0,0,1.57046773691956,0.297046400327086,0,0,13.1577485171795,1.74036297528658,0,0,0,0,2.19100916473955,0.458729283404541,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0.126698501011437,0,0,0,0,1.21245917149183,0,0,0,1.27940389140589,0,7.94443590982875,2.29676442894674,0,0.636471582781649,0.202117188958219,1.52401723527873,0,2.82878622661268,2.07994395638761,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,2.61655931668334,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2274711980715,88.6645909604561,13.3141866051825,0,0,0,0,0,0,11.6339035791694,9.02450013615638,11.5015761479401,0.223915474239924,4.85840499028469,0.257575567634187,0.436194716338694,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,1.72372840368309,0.645484683583826,0,0.752969358170419,0.818718450173537,0.224723484445085,0.918251677112708,2.56743221660875,1.27867425159808,0,0,0,0.870627715885752,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,2.57794345191295,0.949387162322653,0,0,0,0,0,0,0,0,0,0,2.18455444504853,0,0,0,0,0,0,0.569212969109448,1.76171156811282,0.382273228125229,1.32171328579026,11.7706798226123,0,107.796954022381,47.9473130553981,96.8383060287688,7.18901930179916,107.228425722451,93.2692177297425,35.068811113424,9.58129929212493,147.892165552368,113.868421815981,132.423089381093,2.17755243533648,3.51160238411671,7.89301942097645,6.63240042686036,15.9391697154279,35.1439154694083,31.5698177145861,11.4989076185474,9.85791281468826,70.1293503291516,96.9029396261016,216.837876060714,47.1476813199663,37.1117568698159,45.621698133522,15.9609626222439,18.9420184508539,29.983374372563,45.4612323924512,44.3409118337365,111.488529003277,69.8018910994954,60.53660082301,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.458426764241994,0,0,0,0,0,1.19245312152671,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,8.38779888887836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,88.2697805704634,37.087942875837,49.2837259314234,0,0,0,0,0.637938751653163,5.24304916763028,11.966458368161,9.11714129559278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.3085833666542,16.8257076638521,34.2595460549056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,4.56702848308952,3.0585488285695,4.5571774973933,14.0556747520096,10.6954191002411,2.59389324477087,5.40031437238115,4.75875105776562,0,0,0,0,0,1.70740424036194,7.33360854552583,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.597743964753209,2.48655523978033,0,0,1.96935688737711,0,0,0,0,11.7385652707951,19.1586473877552,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0.123563938946503,0.208843899010911,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.969890164884194,0,0,0,0,0.126621591911757,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,2.89176089707246,0.279282401272254,0.229160424011684,0,0.199679000498991,0.858452096273142,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,1.26089131678717,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0.13223260174269,0,0,12.7077020955557,0.471612915298998,4.14239055347196,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.64477330057155,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0.971421986118279,0,0,0,0,0,0,2.9326180081019,0.218559560503957,0,0,0,1.57046773691956,0.297046400327086,0,0,13.1577485171795,1.74036297528658,0,0,0,0,2.19100916473955,0.458729283404541,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0.126698501011437,0,0,0,0,1.21245917149183,0,0,0,1.27940389140589,0,7.94443590982875,2.29676442894674,0,0.636471582781649,0.202117188958219,1.52401723527873,0,2.82878622661268,2.07994395638761,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,2.61655931668334,0.641136984606466 | ||
|short_description=p3@PIK3R1 | |short_description=p3@PIK3R1 | ||
}} | }} |
Latest revision as of 12:13, 18 September 2015
Short description: | p3@PIK3R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIK3R1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 36bp_to_ENST00000522084_5end |
EntrezGene: | PIK3R1 |
HGNC: | 8979 |
UniProt: | E5RHI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 8.59e-33 | 25 |
pro-T cell | 8.59e-33 | 25 |
mature alpha-beta T cell | 3.23e-32 | 18 |
alpha-beta T cell | 3.23e-32 | 18 |
immature T cell | 3.23e-32 | 18 |
mature T cell | 3.23e-32 | 18 |
immature alpha-beta T cell | 3.23e-32 | 18 |
leukocyte | 1.05e-22 | 136 |
CD8-positive, alpha-beta T cell | 2.03e-22 | 11 |
lymphoid lineage restricted progenitor cell | 6.03e-22 | 52 |
lymphocyte | 2.26e-21 | 53 |
common lymphoid progenitor | 2.26e-21 | 53 |
hematopoietic stem cell | 1.01e-15 | 168 |
nongranular leukocyte | 1.66e-15 | 115 |
granulocyte | 2.94e-15 | 8 |
hematopoietic cell | 3.09e-14 | 177 |
CD4-positive, alpha-beta T cell | 1.23e-13 | 6 |
hematopoietic oligopotent progenitor cell | 9.80e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.80e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 1.99e-11 | 120 |
blood cell | 1.23e-10 | 11 |
naive T cell | 1.06e-07 | 3 |
natural killer cell | 2.03e-07 | 3 |
pro-NK cell | 2.03e-07 | 3 |
single nucleate cell | 3.19e-07 | 3 |
mononuclear cell | 3.19e-07 | 3 |
basophil | 4.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.32e-16 | 15 |
haemolymphatic fluid | 1.32e-16 | 15 |
organism substance | 1.32e-16 | 15 |
adult organism | 1.72e-07 | 114 |
hemopoietic organ | 8.14e-07 | 7 |
immune organ | 8.14e-07 | 7 |