FFCP PHASE1:Hg19::chr6:36097864..36097909,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:36097864..36097909,+
|short_description=p7@MAPK13
|description=CAGE_peak_7_at_MAPK13_5end
|association_with_transcript=-188bp_to_ENST00000211287,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5603 | |EntrezGene=5603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6875 | |HGNC=6875 | ||
|TSSclassifier=strong | |||
|UniProt=O15264,Q5R3E4 | |UniProt=O15264,Q5R3E4 | ||
|association_with_transcript=-188bp_to_ENST00000211287,ENST00000373761_5end | |||
|cluster_id=chr6:36097864..36097909,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_7_at_MAPK13_5end | |||
|id=chr6:36097864..36097909,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.54e-10!42;CL:0000860!6.12e-09!45;CL:0002334!1.23e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000569;2.10e-16;4!CL:0000860;2.91e-16;33!CL:0002057;2.91e-16;33!CL:0002334;1.95e-15;12!CL:0002582;1.78e-12;3!CL:0000473;3.46e-12;39!CL:0000234;3.46e-12;39!CL:0002583;3.10e-09;2!CL:0000576;9.13e-09;48!CL:0002570;1.44e-08;8!CL:0000766;2.73e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.70e-18,42;CL:0002057,2.70e-18,42;CL:0000569,9.45e-17,4;CL:0000011,9.45e-17,4;CL:0002334,9.08e-16,12;CL:0000473,1.42e-15,48;CL:0000234,1.42e-15,48;CL:0002582,9.05e-13,3;CL:0002194,8.84e-12,59;CL:0000576,8.84e-12,59;CL:0000040,8.84e-12,59;CL:0000559,8.84e-12,59;CL:0002009,2.72e-11,61;CL:0000766,1.45e-10,72;CL:0000839,3.34e-10,66;CL:0000557,5.28e-10,67;CL:0002583,4.51e-09,2;CL:0002570,1.14e-08,8;CL:0000134,4.30e-08,354;CL:0000034,7.70e-08,441;CL:0002320,8.92e-08,361;CL:0000048,9.89e-08,427;CL:0000723,1.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000011;2.10e-16;4!CL:0002057;4.29e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.53e-08!22;UBERON:0001869!4.72e-08!32;UBERON:0002020!2.84e-07!34;UBERON:0003528!2.84e-07!34;UBERON:0001893!3.08e-07!34;UBERON:0001950!4.04e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;3.88e-08;5!UBERON:0001013;2.49e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.15e-09,98;UBERON:0003061,3.15e-09,98;UBERON:0002371,1.87e-08,76;UBERON:0002384,4.65e-08,371;UBERON:0002072,5.03e-08,5;UBERON:0002193,5.14e-08,108;UBERON:0001474,1.29e-07,82;UBERON:0001013,2.16e-07,14;UBERON:0003081,2.25e-07,203 | |||
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| ||
|short_description=p7@MAPK13 | |||
}} | }} |
Latest revision as of 11:57, 18 September 2015
Short description: | p7@MAPK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MAPK13_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -188bp_to_ENST00000211287, ENST00000373761_5end |
EntrezGene: | MAPK13 |
HGNC: | 6875 |
UniProt: | O15264Q5R3E4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.70e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-18 | 42 |
cardiac mesenchymal cell | 9.45e-17 | 4 |
migratory trunk neural crest cell | 9.45e-17 | 4 |
preadipocyte | 9.08e-16 | 12 |
defensive cell | 1.42e-15 | 48 |
phagocyte | 1.42e-15 | 48 |
visceral preadipocyte | 9.05e-13 | 3 |
monopoietic cell | 8.84e-12 | 59 |
monocyte | 8.84e-12 | 59 |
monoblast | 8.84e-12 | 59 |
promonocyte | 8.84e-12 | 59 |
macrophage dendritic cell progenitor | 2.72e-11 | 61 |
myeloid leukocyte | 1.45e-10 | 72 |
myeloid lineage restricted progenitor cell | 3.34e-10 | 66 |
granulocyte monocyte progenitor cell | 5.28e-10 | 67 |
subcutaneous preadipocyte | 4.51e-09 | 2 |
mesenchymal stem cell of adipose | 1.14e-08 | 8 |
mesenchymal cell | 4.30e-08 | 354 |
stem cell | 7.70e-08 | 441 |
connective tissue cell | 8.92e-08 | 361 |
multi fate stem cell | 9.89e-08 | 427 |
somatic stem cell | 1.69e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.15e-09 | 98 |
blood island | 3.15e-09 | 98 |
bone marrow | 1.87e-08 | 76 |
connective tissue | 4.65e-08 | 371 |
hypodermis | 5.03e-08 | 5 |
hemolymphoid system | 5.14e-08 | 108 |
bone element | 1.29e-07 | 82 |
adipose tissue | 2.16e-07 | 14 |
lateral plate mesoderm | 2.25e-07 | 203 |