FFCP PHASE1:Hg19::chr1:51796198..51796224,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:51796198..51796224,-
|short_description=p3@TTC39A
|description=CAGE_peak_3_at_TTC39A_5end
|association_with_transcript=7bp_to_ENST00000451380_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22996 | |EntrezGene=22996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18657 | |HGNC=18657 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQY9 | |UniProt=E7EQY9 | ||
|association_with_transcript=7bp_to_ENST00000451380_5end | |||
|cluster_id=chr1:51796198..51796224,- | |||
|description=CAGE_peak_3_at_TTC39A_5end | |||
|id=chr1:51796198..51796224,- | |||
|ontology_enrichment_celltype=CL:0000066!2.70e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000784;5.16e-07;3!CL:1000497;7.99e-07;17!CL:0002518;7.99e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.69e-07,3;CL:1000497,8.20e-07,17;CL:0002518,8.20e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.53e-13;10!UBERON:0007687;2.53e-13;10 | |||
|ontology_enrichment_disease=DOID:305!1.64e-17!106;DOID:0050687!3.14e-12!143;DOID:299!3.41e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.10e-09;4!DOID:1612;2.10e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.07e-09,4;DOID:1612,2.07e-09,4;DOID:305,5.53e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.95e-28!115;UBERON:0004111!3.57e-15!241;UBERON:0000481!1.04e-14!347;UBERON:0004921!3.70e-14!129;UBERON:0004185!3.70e-14!129;UBERON:0005177!1.62e-13!107;UBERON:0000025!3.92e-13!194;UBERON:0000062!1.27e-12!511;UBERON:0001007!1.08e-11!155;UBERON:0001555!1.08e-11!155;UBERON:0007026!1.08e-11!155;UBERON:0000489!1.13e-11!32;UBERON:0009569!1.54e-11!113;UBERON:0001049!1.82e-11!57;UBERON:0005068!1.82e-11!57;UBERON:0006241!1.82e-11!57;UBERON:0007135!1.82e-11!57;UBERON:0000477!3.45e-11!286;UBERON:0000466!3.70e-11!126;UBERON:0002113!6.38e-11!27;UBERON:0003918!6.38e-11!27;UBERON:0005095!6.38e-11!27;UBERON:0007687!6.38e-11!27;UBERON:0000064!6.59e-11!219;UBERON:0004119!7.60e-11!169;UBERON:0000925!7.60e-11!169;UBERON:0006595!7.60e-11!169;UBERON:0000468!2.64e-10!659;UBERON:0000077!3.36e-10!130;UBERON:0005172!5.15e-10!55;UBERON:0005173!5.15e-10!55;UBERON:0000922!8.13e-10!612;UBERON:0005743!1.24e-09!86;UBERON:0003103!1.26e-09!69;UBERON:0001008!1.91e-09!45;UBERON:0003080!3.19e-09!42;UBERON:0000073!3.26e-09!94;UBERON:0001016!3.26e-09!94;UBERON:0000467!3.60e-09!625;UBERON:0000475!3.73e-09!365;UBERON:0003075!3.98e-09!86;UBERON:0007284!3.98e-09!86;UBERON:0006554!4.61e-09!44;UBERON:0000480!4.66e-09!626;UBERON:0000464!4.95e-09!104;UBERON:0002417!5.00e-09!61;UBERON:0000916!5.00e-09!61;UBERON:0002616!5.20e-09!59;UBERON:0000955!6.43e-09!69;UBERON:0006238!6.43e-09!69;UBERON:0000483!7.00e-09!309;UBERON:0002780!1.24e-08!41;UBERON:0001890!1.24e-08!41;UBERON:0006240!1.24e-08!41;UBERON:0001017!1.24e-08!82;UBERON:0000119!1.72e-08!312;UBERON:0001041!1.96e-08!98;UBERON:0000923!3.39e-08!604;UBERON:0005291!3.39e-08!604;UBERON:0006598!3.39e-08!604;UBERON:0002532!3.39e-08!604;UBERON:0002346!4.29e-08!90;UBERON:0002050!4.32e-08!605;UBERON:0005423!4.32e-08!605;UBERON:0005911!1.46e-07!82;UBERON:0003056!2.19e-07!61;UBERON:0002020!7.06e-07!34;UBERON:0003528!7.06e-07!34;UBERON:0005409!7.35e-07!35;UBERON:0000160!8.34e-07!27;UBERON:0000063!8.74e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;5.52e-15;24!UBERON:0011143;5.52e-15;24!UBERON:0000489;2.54e-13;29!UBERON:0006554;3.68e-11;30!UBERON:0001008;3.68e-11;30!UBERON:0000353;8.19e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.19e-17,26;UBERON:0003918,1.19e-17,26;UBERON:0011143,1.19e-17,26;UBERON:0005095,1.19e-17,26;UBERON:0007687,1.19e-17,26;UBERON:0000489,8.07e-16,31;UBERON:0005177,1.93e-13,101;UBERON:0003103,2.25e-13,68;UBERON:0009569,2.53e-13,112;UBERON:0005172,1.77e-12,54;UBERON:0005173,1.77e-12,54;UBERON:0007023,6.78e-12,114;UBERON:0006554,6.51e-11,47;UBERON:0002417,1.33e-10,60;UBERON:0000916,1.33e-10,60;UBERON:0001008,1.42e-10,48;UBERON:0000058,3.95e-09,19;UBERON:0000353,7.45e-08,15;UBERON:0002100,2.69e-07,199;UBERON:0006555,3.20e-07,16;UBERON:0004819,3.20e-07,16 | |||
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| ||
|short_description=p3@TTC39A | |||
}} | }} |
Latest revision as of 11:40, 18 September 2015
Short description: | p3@TTC39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTC39A_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000451380_5end |
EntrezGene: | TTC39A |
HGNC: | 18657 |
UniProt: | E7EQY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.69e-07 | 3 |
kidney cell | 8.20e-07 | 17 |
kidney epithelial cell | 8.20e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.19e-17 | 26 |
kidney mesenchyme | 1.19e-17 | 26 |
upper urinary tract | 1.19e-17 | 26 |
kidney rudiment | 1.19e-17 | 26 |
kidney field | 1.19e-17 | 26 |
cavitated compound organ | 8.07e-16 | 31 |
trunk region element | 1.93e-13 | 101 |
compound organ | 2.25e-13 | 68 |
subdivision of trunk | 2.53e-13 | 112 |
abdomen element | 1.77e-12 | 54 |
abdominal segment element | 1.77e-12 | 54 |
adult organism | 6.78e-12 | 114 |
urinary system structure | 6.51e-11 | 47 |
abdominal segment of trunk | 1.33e-10 | 60 |
abdomen | 1.33e-10 | 60 |
renal system | 1.42e-10 | 48 |
duct | 3.95e-09 | 19 |
parenchyma | 7.45e-08 | 15 |
trunk | 2.69e-07 | 199 |
excretory tube | 3.20e-07 | 16 |
kidney epithelium | 3.20e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.07e-09 | 4 |
breast cancer | 2.07e-09 | 4 |
carcinoma | 5.53e-08 | 106 |