FFCP PHASE1:Hg19::chr11:58695132..58695150,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92292 | |EntrezGene=92292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30519 | |HGNC=30519 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU33 | |UniProt=B4DU33 | ||
|association_with_transcript=0bp_to_ENST00000444580,uc001nnf.2_5end | |association_with_transcript=0bp_to_ENST00000444580,uc001nnf.2_5end | ||
|cluster_id=chr11:58695132..58695150,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_GLYATL1_5end | |description=CAGE_peak_6_at_GLYATL1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!9.34e-13!5;CL:0000540!4.13e-07!6;CL:0000031!4.13e-07!6;CL:0000404!4.13e-07!6 | |ontology_enrichment_celltype=CL:0002322!9.34e-13!5;CL:0000540!4.13e-07!6;CL:0000031!4.13e-07!6;CL:0000404!4.13e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.52e-12;6!CL:0000404;6.52e-12;6 | |ontology_enrichment_celltype_v019=CL:0000540;6.52e-12;6!CL:0000404;6.52e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.70e-12,6;CL:0000031,6.70e-12,6;CL:0000404,6.70e-12,6;CL:0000047,3.70e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;6.52e-12;6!UBERON:0003104;4.04e-09;31!UBERON:0003918;1.85e-07;10!UBERON:0007687;1.85e-07;10!UBERON:0004161;5.15e-07;11 | |ontology_enrichment_development_v019=CL:0000031;6.52e-12;6!UBERON:0003104;4.04e-09;31!UBERON:0003918;1.85e-07;10!UBERON:0007687;1.85e-07;10!UBERON:0004161;5.15e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!7.69e-10!2;UBERON:0002757!7.69e-10!2;UBERON:0010134!7.69e-10!2;UBERON:0002784!7.69e-10!2;UBERON:0005408!7.69e-10!2;UBERON:0001899!7.69e-10!2 | |ontology_enrichment_uberon=UBERON:0001905!7.69e-10!2;UBERON:0002757!7.69e-10!2;UBERON:0010134!7.69e-10!2;UBERON:0002784!7.69e-10!2;UBERON:0005408!7.69e-10!2;UBERON:0001899!7.69e-10!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.06e-14;19!UBERON:0006925;2.06e-14;19!UBERON:0002423;4.94e-11;25!UBERON:0002368;6.94e-11;33!UBERON:0001905;1.03e-09;2!UBERON:0002757;1.03e-09;2!UBERON:0010134;1.03e-09;2!UBERON:0005408;1.03e-09;2!UBERON:0001899;1.03e-09;2!UBERON:0000949;4.20e-09;43!UBERON:0002365;7.04e-09;31!UBERON:0002330;7.04e-09;31!UBERON:0005172;1.49e-08;52!UBERON:0005173;1.49e-08;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.06e-14;19!UBERON:0006925;2.06e-14;19!UBERON:0002423;4.94e-11;25!UBERON:0002368;6.94e-11;33!UBERON:0001905;1.03e-09;2!UBERON:0002757;1.03e-09;2!UBERON:0010134;1.03e-09;2!UBERON:0005408;1.03e-09;2!UBERON:0001899;1.03e-09;2!UBERON:0000949;4.20e-09;43!UBERON:0002365;7.04e-09;31!UBERON:0002330;7.04e-09;31!UBERON:0005172;1.49e-08;52!UBERON:0005173;1.49e-08;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.99e-14,19;UBERON:0006925,1.99e-14,19;UBERON:0008836,1.99e-14,19;UBERON:0008835,1.66e-12,22;UBERON:0003894,1.66e-12,22;UBERON:0002368,5.25e-12,35;UBERON:0009854,5.61e-12,23;UBERON:0007499,4.81e-11,25;UBERON:0009497,4.81e-11,25;UBERON:0000015,4.81e-11,25;UBERON:0002423,4.81e-11,25;UBERON:0006235,4.81e-11,25;UBERON:0004161,4.81e-11,25;UBERON:0005172,7.08e-11,54;UBERON:0005173,7.08e-11,54;UBERON:0009856,1.25e-10,26;UBERON:0002417,9.09e-10,60;UBERON:0000916,9.09e-10,60;UBERON:0001905,1.12e-09,2;UBERON:0002757,1.12e-09,2;UBERON:0010134,1.12e-09,2;UBERON:0005408,1.12e-09,2;UBERON:0001899,1.12e-09,2;UBERON:0000949,2.41e-09,45;UBERON:0002365,5.83e-09,31;UBERON:0002330,5.83e-09,31;UBERON:0002530,4.03e-07,59 | |||
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| ||
|short_description=p6@GLYATL1 | |short_description=p6@GLYATL1 | ||
}} | }} |
Latest revision as of 11:39, 18 September 2015
Short description: | p6@GLYATL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GLYATL1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000444580, uc001nnf.2_5end |
EntrezGene: | GLYATL1 |
HGNC: | 30519 |
UniProt: | B4DU33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.70e-12 | 6 |
neuroblast | 6.70e-12 | 6 |
electrically signaling cell | 6.70e-12 | 6 |
neuronal stem cell | 3.70e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
liver | 1.99e-14 | 19 |
digestive gland | 1.99e-14 | 19 |
liver bud | 1.99e-14 | 19 |
hepatic diverticulum | 1.66e-12 | 22 |
liver primordium | 1.66e-12 | 22 |
endocrine gland | 5.25e-12 | 35 |
digestive tract diverticulum | 5.61e-12 | 23 |
epithelial sac | 4.81e-11 | 25 |
epithelium of foregut-midgut junction | 4.81e-11 | 25 |
anatomical boundary | 4.81e-11 | 25 |
hepatobiliary system | 4.81e-11 | 25 |
foregut-midgut junction | 4.81e-11 | 25 |
septum transversum | 4.81e-11 | 25 |
abdomen element | 7.08e-11 | 54 |
abdominal segment element | 7.08e-11 | 54 |
sac | 1.25e-10 | 26 |
abdominal segment of trunk | 9.09e-10 | 60 |
abdomen | 9.09e-10 | 60 |
pineal body | 1.12e-09 | 2 |
regional part of epithalamus | 1.12e-09 | 2 |
secretory circumventricular organ | 1.12e-09 | 2 |
circumventricular organ | 1.12e-09 | 2 |
epithalamus | 1.12e-09 | 2 |
endocrine system | 2.41e-09 | 45 |
exocrine gland | 5.83e-09 | 31 |
exocrine system | 5.83e-09 | 31 |
gland | 4.03e-07 | 59 |