FFCP PHASE1:Hg19::chr1:51768822..51768836,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22996 | |EntrezGene=22996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18657 | |HGNC=18657 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000524442_5end | |association_with_transcript=0bp_to_ENST00000524442_5end | ||
|cluster_id=chr1:51768822..51768836,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_15_at_TTC39A_5end | |description=CAGE_peak_15_at_TTC39A_5end | ||
|id=chr1:51768822..51768836,- | |id=chr1:51768822..51768836,- | ||
|ontology_enrichment_celltype=CL:0000784!6.02e-31!3;CL:0000080!3.69e-16!6;CL:0000167!2.18e-11!1;CL:0000164!2.18e-11!1;CL:0000502!2.18e-11!1;CL:0000172!2.18e-11!1;CL:0000173!2.18e-11!1;CL:0002351!2.18e-11!1;CL:0000451!7.18e-09!10 | |ontology_enrichment_celltype=CL:0000784!6.02e-31!3;CL:0000080!3.69e-16!6;CL:0000167!2.18e-11!1;CL:0000164!2.18e-11!1;CL:0000502!2.18e-11!1;CL:0000172!2.18e-11!1;CL:0000173!2.18e-11!1;CL:0002351!2.18e-11!1;CL:0000451!7.18e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!2.18e-11!1;DOID:0060060!3.63e-11!1;DOID:0060061!3.63e-11!1;DOID:8691!3.63e-11!1 | |ontology_enrichment_disease=DOID:4430!2.18e-11!1;DOID:0060060!3.63e-11!1;DOID:0060061!3.63e-11!1;DOID:8691!3.63e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!6.48e-10!10;UBERON:0000358!6.48e-10!10;UBERON:0000307!6.48e-10!10;UBERON:0000091!6.48e-10!10;UBERON:0000087!6.48e-10!10;UBERON:0007806!6.48e-10!10;UBERON:0008780!6.48e-10!10;UBERON:0005728!6.48e-10!10;UBERON:0000178!9.16e-07!15;UBERON:0000179!9.16e-07!15;UBERON:0000463!9.16e-07!15 | |ontology_enrichment_uberon=UBERON:0002331!6.48e-10!10;UBERON:0000358!6.48e-10!10;UBERON:0000307!6.48e-10!10;UBERON:0000091!6.48e-10!10;UBERON:0000087!6.48e-10!10;UBERON:0007806!6.48e-10!10;UBERON:0008780!6.48e-10!10;UBERON:0005728!6.48e-10!10;UBERON:0000178!9.16e-07!15;UBERON:0000179!9.16e-07!15;UBERON:0000463!9.16e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-36;10!UBERON:0000178;1.40e-24;15!UBERON:0000179;1.40e-24;15!UBERON:0000463;1.40e-24;15!UBERON:0000478;1.02e-15;24!UBERON:0002390;4.19e-12;32!UBERON:0000922;5.87e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.40e-36,10;UBERON:0000358,2.40e-36,10;UBERON:0000307,2.40e-36,10;UBERON:0000091,2.40e-36,10;UBERON:0000087,2.40e-36,10;UBERON:0007010,2.40e-36,10;UBERON:0007806,2.40e-36,10;UBERON:0008780,2.40e-36,10;UBERON:0005728,2.40e-36,10;UBERON:0000178,1.40e-24,15;UBERON:0000179,1.40e-24,15;UBERON:0000463,1.40e-24,15;UBERON:0000478,1.02e-15,24 | |||
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|short_description=p15@TTC39A | |short_description=p15@TTC39A | ||
}} | }} |
Latest revision as of 11:38, 18 September 2015
Short description: | p15@TTC39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TTC39A_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 0bp_to_ENST00000524442_5end |
EntrezGene: | TTC39A |
HGNC: | 18657 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.40e-36 | 10 |
blastocyst | 2.40e-36 | 10 |
blastula | 2.40e-36 | 10 |
bilaminar disc | 2.40e-36 | 10 |
inner cell mass | 2.40e-36 | 10 |
cleaving embryo | 2.40e-36 | 10 |
connecting stalk | 2.40e-36 | 10 |
inner cell mass derived epiblast | 2.40e-36 | 10 |
extraembryonic mesoderm | 2.40e-36 | 10 |
blood | 1.40e-24 | 15 |
haemolymphatic fluid | 1.40e-24 | 15 |
organism substance | 1.40e-24 | 15 |
extraembryonic structure | 1.02e-15 | 24 |