FFCP PHASE1:Hg19::chr1:51763556..51763631,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22996 | |EntrezGene=22996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18657 | |HGNC=18657 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534098,uc001csj.2_5end | |association_with_transcript=0bp_to_ENST00000534098,uc001csj.2_5end | ||
|cluster_id=chr1:51763556..51763631,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_2_at_TTC39A_5end | |description=CAGE_peak_2_at_TTC39A_5end | ||
|id=chr1:51763556..51763631,- | |id=chr1:51763556..51763631,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;4.72e-09;3!CL:0000167;2.10e-07;1!CL:0000164;2.10e-07;1!CL:0000502;2.10e-07;1!CL:0000172;2.10e-07;1!CL:0002553;2.10e-07;1!CL:0000173;2.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.26e-09,3;CL:0002553,1.80e-07,1;CL:0000167,2.47e-07,1;CL:0000164,2.47e-07,1;CL:0000502,2.47e-07,1;CL:0000172,2.47e-07,1;CL:0000173,2.47e-07,1;CL:0002351,2.47e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.27e-08;1!CL:0002351;2.10e-07;1!UBERON:0006242;2.10e-07;1 | |||
|ontology_enrichment_disease=DOID:5093!9.86e-09!4;DOID:1612!9.86e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.62e-26;4!DOID:1612;1.62e-26;4!DOID:3119;1.17e-07;14!DOID:4430;2.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.73e-26,4;DOID:1612,1.73e-26,4;DOID:0050687,3.03e-08,143;DOID:305,9.45e-08,106;DOID:3119,1.15e-07,14;DOID:4430,2.47e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.28e-22!115;UBERON:0002298!1.74e-10!8;UBERON:0003135!5.89e-09!11;UBERON:0003101!2.52e-08!22;UBERON:0000079!2.52e-08!22;UBERON:0002616!4.87e-08!59;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;3.71e-16;10!UBERON:0001443;1.14e-14;11!UBERON:0002148;3.94e-13;2!UBERON:0006331;3.94e-13;2!UBERON:0009662;3.94e-13;2!UBERON:0002298;1.11e-09;6!UBERON:0000988;4.72e-09;3!UBERON:0004913;7.26e-08;1!UBERON:0003703;7.26e-08;1!UBERON:0001174;7.26e-08;1!UBERON:0004914;7.26e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.55e-16,10;UBERON:0001443,1.09e-14,11;UBERON:0002148,3.27e-13,2;UBERON:0006331,3.27e-13,2;UBERON:0009662,3.27e-13,2;UBERON:0002298,9.94e-10,6;UBERON:0000988,4.18e-09,3;UBERON:0004913,7.26e-08,1;UBERON:0003703,7.26e-08,1;UBERON:0001174,7.26e-08,1;UBERON:0004914,7.26e-08,1 | |||
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| ||
|short_description=p2@TTC39A | |short_description=p2@TTC39A | ||
}} | }} |
Latest revision as of 11:32, 18 September 2015
Short description: | p2@TTC39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC39A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000534098, uc001csj.2_5end |
EntrezGene: | TTC39A |
HGNC: | 18657 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.26e-09 | 3 |
lung fibroblast | 1.80e-07 | 1 |
peptide hormone secreting cell | 2.47e-07 | 1 |
enteroendocrine cell | 2.47e-07 | 1 |
type D enteroendocrine cell | 2.47e-07 | 1 |
somatostatin secreting cell | 2.47e-07 | 1 |
pancreatic D cell | 2.47e-07 | 1 |
progenitor cell of endocrine pancreas | 2.47e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
breast | 3.55e-16 | 10 |
chest | 1.09e-14 | 11 |
locus ceruleus | 3.27e-13 | 2 |
brainstem nucleus | 3.27e-13 | 2 |
hindbrain nucleus | 3.27e-13 | 2 |
brainstem | 9.94e-10 | 6 |
pons | 4.18e-09 | 3 |
hepatopancreatic ampulla | 7.26e-08 | 1 |
extrahepatic bile duct | 7.26e-08 | 1 |
common bile duct | 7.26e-08 | 1 |
duodenal papilla | 7.26e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.73e-26 | 4 |
breast cancer | 1.73e-26 | 4 |
cell type cancer | 3.03e-08 | 143 |
carcinoma | 9.45e-08 | 106 |
gastrointestinal system cancer | 1.15e-07 | 14 |
somatostatinoma | 2.47e-07 | 1 |