FFCP PHASE1:Hg19::chr4:71859413..71859473,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:71859413..71859473,+
|short_description=p3@DCK
|description=CAGE_peak_3_at_DCK_5end
|association_with_transcript=58bp_to_ENST00000504730,ENST00000504952_5e...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1633 | |EntrezGene=1633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2704 | |HGNC=2704 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCP9,D6RFG8 | |UniProt=D6RCP9,D6RFG8 | ||
|association_with_transcript=58bp_to_ENST00000504730,ENST00000504952_5end | |||
|cluster_id=chr4:71859413..71859473,+ | |||
|coexpression_cluster_id=C4393 | |||
|description=CAGE_peak_3_at_DCK_5end | |||
|id=chr4:71859413..71859473,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.92e-08!682;CL:0000548!8.10e-08!679;CL:0000004!8.10e-08!679;CL:0000255!8.10e-08!679;CL:0000945!2.57e-07!24;CL:0000826!2.57e-07!24;CL:0000003!3.93e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.35e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.52e-07,24;CL:0000826,2.52e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.01e-27!235;DOID:14566!2.80e-26!239;DOID:2531!1.14e-19!51;DOID:0060083!1.14e-19!51;DOID:0050686!8.84e-17!137;DOID:1240!1.25e-15!39;DOID:305!9.86e-13!106;DOID:8692!3.31e-12!31;DOID:0050687!2.93e-11!143;DOID:0060058!4.57e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.01e-13;39!DOID:2531;5.38e-13;51!DOID:0060083;5.38e-13;51!DOID:8692;3.61e-12;31!DOID:0060058;1.71e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.45e-27,235;DOID:14566,2.54e-26,239;DOID:2531,8.09e-21,51;DOID:0060083,8.09e-21,51;DOID:1240,2.01e-16,39;DOID:0050686,3.59e-16,137;DOID:8692,1.01e-12,31;DOID:305,1.58e-12,106;DOID:0050687,3.60e-11,143;DOID:0060058,1.56e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@DCK | |||
}} | }} |
Latest revision as of 11:32, 18 September 2015
Short description: | p3@DCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DCK_5end |
Coexpression cluster: | C4393_Reticulocytes_Burkitt_Dendritic_non_lymphoma_acute_NK |
Association with transcript: | 58bp_to_ENST00000504730, ENST00000504952_5end |
EntrezGene: | DCK |
HGNC: | 2704 |
UniProt: | D6RCP9D6RFG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.52e-07 | 24 |
pro-B cell | 2.52e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.45e-27 | 235 |
disease of cellular proliferation | 2.54e-26 | 239 |
hematologic cancer | 8.09e-21 | 51 |
immune system cancer | 8.09e-21 | 51 |
leukemia | 2.01e-16 | 39 |
organ system cancer | 3.59e-16 | 137 |
myeloid leukemia | 1.01e-12 | 31 |
carcinoma | 1.58e-12 | 106 |
cell type cancer | 3.60e-11 | 143 |
lymphoma | 1.56e-07 | 10 |