FFCP PHASE1:Hg19::chr10:52751010..52751050,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:52751010..52751050,+
|short_description=p3@PRKG1
|description=CAGE_peak_3_at_PRKG1_5end
|association_with_transcript=65bp_to_ENST00000401604,uc001jjm.2,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5592 | |EntrezGene=5592 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9414 | |HGNC=9414 | ||
|TSSclassifier=strong | |||
|UniProt=Q13976 | |UniProt=Q13976 | ||
|association_with_transcript=65bp_to_ENST00000401604,uc001jjm.2,uc010qhp.1_5end | |||
|cluster_id=chr10:52751010..52751050,+ | |||
|description=CAGE_peak_3_at_PRKG1_5end | |||
|id=chr10:52751010..52751050,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.77e-31!180;CL:0000680!1.81e-19!57;CL:0000056!1.81e-19!57;CL:0000355!1.81e-19!57;CL:0000187!1.32e-18!54;CL:0000057!1.35e-18!75;CL:0000183!1.07e-16!59;CL:0000393!5.50e-16!60;CL:0000211!5.50e-16!60;CL:0000192!3.12e-14!42;CL:0000514!3.12e-14!42;CL:0000359!2.73e-11!32;CL:0002620!1.03e-10!23;CL:0002494!6.10e-08!16;CL:0000222!6.20e-08!119;CL:0002334!8.67e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.06e-12;23!CL:0000187;1.54e-12;55!CL:0000359;6.83e-12;32!CL:0000192;1.32e-11;43!CL:0000393;3.82e-10;61!CL:0000211;3.82e-10;61!CL:0002334;9.67e-10;12!CL:0002494;9.64e-09;16!CL:0000057;1.56e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.15e-23,58;CL:0000056,2.15e-23,58;CL:0000355,2.15e-23,58;CL:0000187,2.75e-22,55;CL:0000057,8.84e-19,76;CL:0000393,2.34e-18,61;CL:0000211,2.34e-18,61;CL:0000192,9.95e-17,43;CL:0000514,9.95e-17,43;CL:0000359,5.44e-13,32;CL:0002620,1.51e-12,23;CL:0002334,1.60e-09,12;CL:0000222,5.17e-09,121;CL:0002494,9.05e-09,16;CL:0000048,2.11e-07,427;CL:0000723,8.29e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000355;5.12e-12;58!CL:0000514;1.32e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!5.89e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.95e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.67e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.07e-21!70;UBERON:0002385!1.12e-20!63;UBERON:0001015!1.12e-20!63;UBERON:0000383!1.12e-20!63;UBERON:0001134!5.08e-20!61;UBERON:0002036!5.08e-20!61;UBERON:0003082!5.08e-20!61;UBERON:0000914!6.65e-20!83;UBERON:0002329!6.65e-20!83;UBERON:0003077!6.65e-20!83;UBERON:0003059!6.65e-20!83;UBERON:0007282!6.65e-20!83;UBERON:0009618!6.65e-20!83;UBERON:0007285!6.65e-20!83;UBERON:0000486!8.51e-16!82;UBERON:0004872!1.49e-15!84;UBERON:0000475!8.72e-15!365;UBERON:0000481!4.49e-12!347;UBERON:0007100!5.59e-12!27;UBERON:0005256!1.28e-11!143;UBERON:0002100!1.56e-11!216;UBERON:0001009!3.76e-11!113;UBERON:0000468!4.24e-11!659;UBERON:0001981!1.15e-10!60;UBERON:0007500!1.15e-10!60;UBERON:0004537!1.15e-10!60;UBERON:0006965!1.15e-10!60;UBERON:0001637!1.34e-10!42;UBERON:0003509!1.34e-10!42;UBERON:0004572!1.34e-10!42;UBERON:0000948!1.65e-10!24;UBERON:0005498!1.65e-10!24;UBERON:0004140!1.65e-10!24;UBERON:0009881!1.65e-10!24;UBERON:0004141!1.65e-10!24;UBERON:0003084!1.65e-10!24;UBERON:0007005!1.65e-10!24;UBERON:0004139!1.65e-10!24;UBERON:0004291!1.65e-10!24;UBERON:0002049!1.82e-10!79;UBERON:0007798!1.82e-10!79;UBERON:0000490!2.13e-10!138;UBERON:0000119!2.54e-10!312;UBERON:0000483!3.13e-10!309;UBERON:0004535!4.13e-10!110;UBERON:0004573!9.19e-10!33;UBERON:0004571!9.19e-10!33;UBERON:0003914!1.54e-09!118;UBERON:0000055!1.70e-08!69;UBERON:0002199!1.86e-08!45;UBERON:0002416!1.86e-08!45;UBERON:0007023!2.95e-08!115;UBERON:0000467!3.40e-08!625;UBERON:0000480!4.77e-08!626;UBERON:0003104!4.95e-08!238;UBERON:0009142!4.95e-08!238;UBERON:0001135!7.71e-08!15;UBERON:0000477!1.70e-07!286;UBERON:0000025!2.84e-07!194;UBERON:0002097!3.44e-07!40;UBERON:0004111!7.70e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.10e-14;25!UBERON:0002385;4.09e-13;31!UBERON:0001015;4.09e-13;31!UBERON:0000383;4.09e-13;31!UBERON:0000948;7.74e-13;22!UBERON:0004573;9.69e-09;33!UBERON:0004571;9.69e-09;33!UBERON:0001135;8.65e-08;15!UBERON:0002097;2.17e-07;41!UBERON:0001134;4.13e-07;16!UBERON:0002036;4.13e-07;16!UBERON:0003688;6.84e-07;6!UBERON:0002358;6.84e-07;6!UBERON:0003684;6.84e-07;6!UBERON:0001178;6.84e-07;6!UBERON:0002199;8.62e-07;46!UBERON:0002416;8.62e-07;46 | |||
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| ||
|short_description=p3@PRKG1 | |||
}} | }} |
Latest revision as of 11:29, 18 September 2015
Short description: | p3@PRKG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRKG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000401604, uc001jjm.2, uc010qhp.1_5end |
EntrezGene: | PRKG1 |
HGNC: | 9414 |
UniProt: | Q13976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.15e-23 | 58 |
myoblast | 2.15e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.15e-23 | 58 |
muscle cell | 2.75e-22 | 55 |
fibroblast | 8.84e-19 | 76 |
electrically responsive cell | 2.34e-18 | 61 |
electrically active cell | 2.34e-18 | 61 |
smooth muscle cell | 9.95e-17 | 43 |
smooth muscle myoblast | 9.95e-17 | 43 |
vascular associated smooth muscle cell | 5.44e-13 | 32 |
skin fibroblast | 1.51e-12 | 23 |
preadipocyte | 1.60e-09 | 12 |
mesodermal cell | 5.17e-09 | 121 |
cardiocyte | 9.05e-09 | 16 |
multi fate stem cell | 2.11e-07 | 427 |
somatic stem cell | 8.29e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.67e-11 | 14 |