FFCP PHASE1:Hg19::chr10:5238793..5238807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1109 | |EntrezGene=1109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=387 | |HGNC=387 | ||
|TSSclassifier=strong | |||
|UniProt=P17516,E9PBP5 | |UniProt=P17516,E9PBP5 | ||
|association_with_transcript=0bp_to_ENST00000263126,ENST00000397357,NM_001818,uc001ihw.2_5end | |association_with_transcript=0bp_to_ENST00000263126,ENST00000397357,NM_001818,uc001ihw.2_5end | ||
|cluster_id=chr10:5238793..5238807,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AKR1C4_5end | |description=CAGE_peak_1_at_AKR1C4_5end | ||
|id=chr10:5238793..5238807,+ | |id=chr10:5238793..5238807,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.29e-13!12;CL:0000417!2.29e-13!12;CL:0000668!2.29e-13!12;CL:0000414!2.29e-13!12;CL:0000412!2.29e-13!12;CL:0000182!2.29e-13!12;CL:0000319!1.07e-07!1;CL:0000167!1.80e-07!1;CL:0000164!1.80e-07!1;CL:0000502!1.80e-07!1;CL:0000172!1.80e-07!1;CL:0000173!1.80e-07!1;CL:0002351!1.80e-07!1 | |ontology_enrichment_celltype=CL:0000181!2.29e-13!12;CL:0000417!2.29e-13!12;CL:0000668!2.29e-13!12;CL:0000414!2.29e-13!12;CL:0000412!2.29e-13!12;CL:0000182!2.29e-13!12;CL:0000319!1.07e-07!1;CL:0000167!1.80e-07!1;CL:0000164!1.80e-07!1;CL:0000502!1.80e-07!1;CL:0000172!1.80e-07!1;CL:0000173!1.80e-07!1;CL:0002351!1.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.45e-21;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.62e-21,12;CL:0000223,2.87e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.40e-19;13!UBERON:0006242;2.08e-16;1!UBERON:0004161;4.11e-13;11!CL:0000223;7.05e-08;58 | |||
|ontology_enrichment_disease=DOID:114!2.11e-13!2;DOID:3030!1.07e-07!1;DOID:4430!1.80e-07!1;DOID:178!1.91e-07!1;DOID:326!1.91e-07!1;DOID:3978!1.91e-07!1;DOID:3394!1.91e-07!1;DOID:5844!1.91e-07!1;DOID:0050619!2.47e-07!1;DOID:1357!2.47e-07!1;DOID:1287!3.95e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.68e-15!25;UBERON:0000015!1.68e-15!25;UBERON:0002423!1.68e-15!25;UBERON:0006235!1.68e-15!25;UBERON:0004161!1.68e-15!25;UBERON:0008835!1.13e-13!22;UBERON:0003894!1.13e-13!22;UBERON:0009854!4.85e-13!23;UBERON:0007499!6.31e-12!25;UBERON:0002107!7.90e-12!19;UBERON:0006925!7.90e-12!19;UBERON:0008836!7.90e-12!19;UBERON:0009856!1.96e-11!26;UBERON:0005057!2.50e-11!26;UBERON:0003929!3.06e-10!54;UBERON:0004921!6.34e-08!129;UBERON:0004185!6.34e-08!129;UBERON:0005911!1.81e-07!82;UBERON:0001764!2.47e-07!1;UBERON:0001825!2.47e-07!1;UBERON:0007190!2.63e-07!1;UBERON:0002336!3.17e-07!1;UBERON:0001018!3.17e-07!1;UBERON:0002473!3.17e-07!1;UBERON:0005340!3.17e-07!1;UBERON:0002316!3.17e-07!1;UBERON:0003544!3.17e-07!1;UBERON:0001020!3.17e-07!1;UBERON:0005970!3.17e-07!1;UBERON:0002437!3.17e-07!1;UBERON:0001007!3.80e-07!155;UBERON:0001555!3.80e-07!155;UBERON:0007026!3.80e-07!155;UBERON:0002365!5.04e-07!31;UBERON:0002330!5.04e-07!31 | |ontology_enrichment_uberon=UBERON:0009497!1.68e-15!25;UBERON:0000015!1.68e-15!25;UBERON:0002423!1.68e-15!25;UBERON:0006235!1.68e-15!25;UBERON:0004161!1.68e-15!25;UBERON:0008835!1.13e-13!22;UBERON:0003894!1.13e-13!22;UBERON:0009854!4.85e-13!23;UBERON:0007499!6.31e-12!25;UBERON:0002107!7.90e-12!19;UBERON:0006925!7.90e-12!19;UBERON:0008836!7.90e-12!19;UBERON:0009856!1.96e-11!26;UBERON:0005057!2.50e-11!26;UBERON:0003929!3.06e-10!54;UBERON:0004921!6.34e-08!129;UBERON:0004185!6.34e-08!129;UBERON:0005911!1.81e-07!82;UBERON:0001764!2.47e-07!1;UBERON:0001825!2.47e-07!1;UBERON:0007190!2.63e-07!1;UBERON:0002336!3.17e-07!1;UBERON:0001018!3.17e-07!1;UBERON:0002473!3.17e-07!1;UBERON:0005340!3.17e-07!1;UBERON:0002316!3.17e-07!1;UBERON:0003544!3.17e-07!1;UBERON:0001020!3.17e-07!1;UBERON:0005970!3.17e-07!1;UBERON:0002437!3.17e-07!1;UBERON:0001007!3.80e-07!155;UBERON:0001555!3.80e-07!155;UBERON:0007026!3.80e-07!155;UBERON:0002365!5.04e-07!31;UBERON:0002330!5.04e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.27e-29;25!UBERON:0002107;2.28e-20;19!UBERON:0006925;2.28e-20;19!UBERON:0002365;6.30e-13;31!UBERON:0002330;6.30e-13;31!UBERON:0002368;2.09e-10;33!UBERON:0002294;1.21e-09;7!UBERON:0001173;1.21e-09;7!UBERON:0005172;8.42e-08;52!UBERON:0005173;8.42e-08;52!UBERON:0000949;9.28e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.27e-29,25;UBERON:0000015,1.27e-29,25;UBERON:0002423,1.27e-29,25;UBERON:0006235,1.27e-29,25;UBERON:0004161,1.27e-29,25;UBERON:0008835,5.52e-25,22;UBERON:0003894,5.52e-25,22;UBERON:0009854,6.79e-24,23;UBERON:0003929,4.12e-22,54;UBERON:0007499,5.65e-22,25;UBERON:0009856,4.00e-21,26;UBERON:0002107,2.33e-20,19;UBERON:0006925,2.33e-20,19;UBERON:0008836,2.33e-20,19;UBERON:0005911,2.60e-14,82;UBERON:0002365,1.66e-12,31;UBERON:0002330,1.66e-12,31;UBERON:0002368,4.45e-11,35;UBERON:0005172,4.80e-10,54;UBERON:0005173,4.80e-10,54;UBERON:0002530,3.75e-09,59;UBERON:0002417,5.16e-09,60;UBERON:0000916,5.16e-09,60;UBERON:0000949,1.30e-08,45;UBERON:0002294,1.05e-07,9;UBERON:0001173,1.05e-07,9;UBERON:0004912,1.05e-07,9;UBERON:0001007,1.15e-07,145;UBERON:0001555,1.15e-07,145;UBERON:0007026,1.15e-07,145;UBERON:0004921,1.39e-07,118;UBERON:0000490,1.50e-07,148;UBERON:0005256,2.20e-07,122;UBERON:0004119,7.25e-07,160;UBERON:0000925,7.25e-07,160;UBERON:0006595,7.25e-07,160 | |||
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|short_description=p1@AKR1C4 | |short_description=p1@AKR1C4 | ||
}} | }} |
Latest revision as of 11:20, 18 September 2015
Short description: | p1@AKR1C4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AKR1C4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000263126, ENST00000397357, NM_001818, uc001ihw.2_5end |
EntrezGene: | AKR1C4 |
HGNC: | 387 |
UniProt: | P17516E9PBP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.62e-21 | 12 |
endodermal cell | 2.87e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.27e-29 | 25 |
anatomical boundary | 1.27e-29 | 25 |
hepatobiliary system | 1.27e-29 | 25 |
foregut-midgut junction | 1.27e-29 | 25 |
septum transversum | 1.27e-29 | 25 |
hepatic diverticulum | 5.52e-25 | 22 |
liver primordium | 5.52e-25 | 22 |
digestive tract diverticulum | 6.79e-24 | 23 |
gut epithelium | 4.12e-22 | 54 |
epithelial sac | 5.65e-22 | 25 |
sac | 4.00e-21 | 26 |
liver | 2.33e-20 | 19 |
digestive gland | 2.33e-20 | 19 |
liver bud | 2.33e-20 | 19 |
endo-epithelium | 2.60e-14 | 82 |
exocrine gland | 1.66e-12 | 31 |
exocrine system | 1.66e-12 | 31 |
endocrine gland | 4.45e-11 | 35 |
abdomen element | 4.80e-10 | 54 |
abdominal segment element | 4.80e-10 | 54 |
gland | 3.75e-09 | 59 |
abdominal segment of trunk | 5.16e-09 | 60 |
abdomen | 5.16e-09 | 60 |
endocrine system | 1.30e-08 | 45 |
biliary system | 1.05e-07 | 9 |
biliary tree | 1.05e-07 | 9 |
biliary bud | 1.05e-07 | 9 |
digestive system | 1.15e-07 | 145 |
digestive tract | 1.15e-07 | 145 |
primitive gut | 1.15e-07 | 145 |
subdivision of digestive tract | 1.39e-07 | 118 |
unilaminar epithelium | 1.50e-07 | 148 |
trunk mesenchyme | 2.20e-07 | 122 |
endoderm-derived structure | 7.25e-07 | 160 |
endoderm | 7.25e-07 | 160 |
presumptive endoderm | 7.25e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.94e-09 | 2 |