FFCP PHASE1:Hg19::chr9:98637954..98637989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375748 | |EntrezGene=375748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26922 | |HGNC=26922 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T890 | |UniProt=Q5T890 | ||
|association_with_transcript=0bp_to_ENST00000288985_5end | |association_with_transcript=0bp_to_ENST00000288985_5end | ||
|cluster_id=chr9:98637954..98637989,+ | |||
|description=CAGE_peak_1_at_C9orf102_5end | |description=CAGE_peak_1_at_C9orf102_5end | ||
|id=chr9:98637954..98637989,+ | |id=chr9:98637954..98637989,+ | ||
|ontology_enrichment_celltype=CL:0000133!9.55e-09!59;CL:0002319!8.79e-08!25 | |ontology_enrichment_celltype=CL:0000133!9.55e-09!59;CL:0002319!8.79e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;7.13e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,9.17e-09,59;CL:0002319,8.77e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.52e-12!235;DOID:14566!1.36e-11!239;DOID:0050687!1.22e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.69e-12,235;DOID:14566,1.40e-11,239;DOID:0050687,1.21e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.28e-24!94;UBERON:0001016!2.28e-24!94;UBERON:0001017!2.12e-21!82;UBERON:0005743!7.24e-21!86;UBERON:0000955!2.16e-16!69;UBERON:0006238!2.16e-16!69;UBERON:0001049!3.10e-16!57;UBERON:0005068!3.10e-16!57;UBERON:0006241!3.10e-16!57;UBERON:0007135!3.10e-16!57;UBERON:0003080!2.25e-15!42;UBERON:0002780!2.39e-15!41;UBERON:0001890!2.39e-15!41;UBERON:0006240!2.39e-15!41;UBERON:0000924!5.63e-15!173;UBERON:0006601!5.63e-15!173;UBERON:0002616!9.72e-15!59;UBERON:0002346!3.50e-14!90;UBERON:0004121!7.93e-14!169;UBERON:0001869!8.76e-14!32;UBERON:0001893!1.27e-13!34;UBERON:0002020!1.49e-13!34;UBERON:0003528!1.49e-13!34;UBERON:0002791!2.74e-13!33;UBERON:0003075!6.64e-13!86;UBERON:0007284!6.64e-13!86;UBERON:0003056!2.61e-12!61;UBERON:0000956!2.66e-11!25;UBERON:0000203!2.66e-11!25;UBERON:0000153!4.07e-11!129;UBERON:0007811!4.07e-11!129;UBERON:0002619!2.23e-10!22;UBERON:0000033!3.86e-10!123;UBERON:0001950!1.62e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.36e-12;32!UBERON:0002791;3.79e-12;32!UBERON:0003528;5.40e-12;34!UBERON:0002020;5.40e-12;34!UBERON:0001893;9.05e-12;34!UBERON:0000956;2.41e-11;25!UBERON:0000203;2.41e-11;25!UBERON:0002780;3.14e-11;41!UBERON:0001890;3.14e-11;41!UBERON:0002619;1.69e-10;22!UBERON:0001950;1.26e-09;20!UBERON:0000073;4.68e-09;53!UBERON:0002616;4.68e-09;53!UBERON:0001016;4.81e-09;83!UBERON:0000922;1.02e-08;49!UBERON:0001017;3.26e-08;75!UBERON:0000955;2.33e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.35e-25,89;UBERON:0001017,2.52e-21,81;UBERON:0000955,2.59e-16,68;UBERON:0006238,2.59e-16,68;UBERON:0001049,3.55e-16,56;UBERON:0005068,3.55e-16,56;UBERON:0006241,3.55e-16,56;UBERON:0007135,3.55e-16,56;UBERON:0000073,2.27e-15,53;UBERON:0002616,2.27e-15,53;UBERON:0002780,2.38e-15,41;UBERON:0001890,2.38e-15,41;UBERON:0003080,2.38e-15,41;UBERON:0006240,2.38e-15,41;UBERON:0011216,3.23e-14,223;UBERON:0004121,3.69e-14,171;UBERON:0000924,3.69e-14,171;UBERON:0006601,3.69e-14,171;UBERON:0002346,7.67e-14,86;UBERON:0001869,8.73e-14,32;UBERON:0001893,1.26e-13,34;UBERON:0003528,1.48e-13,34;UBERON:0002020,1.48e-13,34;UBERON:0002791,3.11e-13,32;UBERON:0003056,1.17e-12,61;UBERON:0003075,1.46e-12,82;UBERON:0007284,1.46e-12,82;UBERON:0000956,2.66e-11,25;UBERON:0000203,2.66e-11,25;UBERON:0002619,2.23e-10,22;UBERON:0001950,1.61e-09,20;UBERON:0010371,1.73e-09,104;UBERON:0010314,2.17e-08,132 | |||
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| ||
|short_description=p1@C9orf102 | |short_description=p1@C9orf102 | ||
}} | }} |
Latest revision as of 11:09, 18 September 2015
Short description: | p1@C9orf102 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf102_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000288985_5end |
EntrezGene: | C9orf102 |
HGNC: | 26922 |
UniProt: | Q5T890 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 9.17e-09 | 59 |
neural cell | 8.77e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.35e-25 | 89 |
central nervous system | 2.52e-21 | 81 |
brain | 2.59e-16 | 68 |
future brain | 2.59e-16 | 68 |
neural tube | 3.55e-16 | 56 |
neural rod | 3.55e-16 | 56 |
future spinal cord | 3.55e-16 | 56 |
neural keel | 3.55e-16 | 56 |
regional part of nervous system | 2.27e-15 | 53 |
regional part of brain | 2.27e-15 | 53 |
regional part of forebrain | 2.38e-15 | 41 |
forebrain | 2.38e-15 | 41 |
anterior neural tube | 2.38e-15 | 41 |
future forebrain | 2.38e-15 | 41 |
organ system subdivision | 3.23e-14 | 223 |
ectoderm-derived structure | 3.69e-14 | 171 |
ectoderm | 3.69e-14 | 171 |
presumptive ectoderm | 3.69e-14 | 171 |
neurectoderm | 7.67e-14 | 86 |
cerebral hemisphere | 8.73e-14 | 32 |
telencephalon | 1.26e-13 | 34 |
brain grey matter | 1.48e-13 | 34 |
gray matter | 1.48e-13 | 34 |
regional part of telencephalon | 3.11e-13 | 32 |
pre-chordal neural plate | 1.17e-12 | 61 |
neural plate | 1.46e-12 | 82 |
presumptive neural plate | 1.46e-12 | 82 |
cerebral cortex | 2.66e-11 | 25 |
pallium | 2.66e-11 | 25 |
regional part of cerebral cortex | 2.23e-10 | 22 |
neocortex | 1.61e-09 | 20 |
ecto-epithelium | 1.73e-09 | 104 |
structure with developmental contribution from neural crest | 2.17e-08 | 132 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.69e-12 | 235 |
disease of cellular proliferation | 1.40e-11 | 239 |
cell type cancer | 1.21e-10 | 143 |