FFCP PHASE1:Hg19::chr3:46448636..46448643,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9034 | |EntrezGene=9034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1612 | |HGNC=1612 | ||
|TSSclassifier=strong | |||
|UniProt=O00421 | |UniProt=O00421 | ||
|association_with_transcript=-10bp_to_ENST00000399036_5end | |association_with_transcript=-10bp_to_ENST00000399036_5end | ||
|cluster_id=chr3:46448636..46448643,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_CCRL2_5end | |description=CAGE_peak_8_at_CCRL2_5end | ||
|id=chr3:46448636..46448643,+ | |id=chr3:46448636..46448643,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.80e-43!140;CL:0000037!5.83e-42!172;CL:0000566!5.83e-42!172;CL:0000988!1.36e-41!182;CL:0002087!6.22e-41!119;CL:0002032!6.10e-39!165;CL:0000837!6.10e-39!165;CL:0002031!3.47e-38!124;CL:0002057!1.84e-36!42;CL:0002009!3.05e-34!65;CL:0002194!4.21e-34!63;CL:0000576!4.21e-34!63;CL:0000040!4.21e-34!63;CL:0000559!4.21e-34!63;CL:0000839!1.55e-33!70;CL:0000860!4.34e-33!45;CL:0000557!2.72e-31!71;CL:0000766!4.04e-31!76;CL:0000763!6.63e-31!112;CL:0000049!6.63e-31!112;CL:0000134!4.41e-09!358;CL:0002320!1.90e-08!365;CL:0000990!6.87e-08!8;CL:0000542!9.04e-08!53;CL:0000051!9.04e-08!53;CL:0000791!9.07e-08!18;CL:0000789!9.07e-08!18;CL:0002420!9.07e-08!18;CL:0002419!9.07e-08!18;CL:0000790!9.07e-08!18;CL:0000625!9.31e-08!11;CL:0000451!9.40e-08!10;CL:0000838!3.45e-07!52;CL:0000080!6.23e-07!6 | |ontology_enrichment_celltype=CL:0000738!9.80e-43!140;CL:0000037!5.83e-42!172;CL:0000566!5.83e-42!172;CL:0000988!1.36e-41!182;CL:0002087!6.22e-41!119;CL:0002032!6.10e-39!165;CL:0000837!6.10e-39!165;CL:0002031!3.47e-38!124;CL:0002057!1.84e-36!42;CL:0002009!3.05e-34!65;CL:0002194!4.21e-34!63;CL:0000576!4.21e-34!63;CL:0000040!4.21e-34!63;CL:0000559!4.21e-34!63;CL:0000839!1.55e-33!70;CL:0000860!4.34e-33!45;CL:0000557!2.72e-31!71;CL:0000766!4.04e-31!76;CL:0000763!6.63e-31!112;CL:0000049!6.63e-31!112;CL:0000134!4.41e-09!358;CL:0002320!1.90e-08!365;CL:0000990!6.87e-08!8;CL:0000542!9.04e-08!53;CL:0000051!9.04e-08!53;CL:0000791!9.07e-08!18;CL:0000789!9.07e-08!18;CL:0002420!9.07e-08!18;CL:0002419!9.07e-08!18;CL:0000790!9.07e-08!18;CL:0000625!9.31e-08!11;CL:0000451!9.40e-08!10;CL:0000838!3.45e-07!52;CL:0000080!6.23e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-79;33!CL:0002057;4.27e-79;33!CL:0000473;4.59e-58;39!CL:0000234;4.59e-58;39!CL:0000576;7.13e-36;48!CL:0000766;2.16e-23;69!CL:0002087;4.47e-14;104!CL:0000763;6.47e-12;100!CL:0000738;1.28e-09;136!CL:0000815;2.37e-08;2!CL:0000792;2.37e-08;2!CL:0002677;2.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.05e-72,42;CL:0002057,5.05e-72,42;CL:0000473,1.24e-66,48;CL:0000234,1.24e-66,48;CL:0002194,9.26e-52,59;CL:0000576,9.26e-52,59;CL:0000040,9.26e-52,59;CL:0000559,9.26e-52,59;CL:0002009,7.68e-50,61;CL:0000766,4.10e-47,72;CL:0000839,1.52e-45,66;CL:0000557,9.21e-45,67;CL:0000738,5.66e-38,136;CL:0002087,5.24e-37,115;CL:0002031,4.16e-35,120;CL:0000763,3.61e-33,108;CL:0000049,3.61e-33,108;CL:0002032,1.22e-30,161;CL:0000837,1.22e-30,161;CL:0000037,5.63e-29,168;CL:0000988,4.99e-27,177;CL:0000134,7.33e-09,354;CL:0002320,1.64e-08,361;CL:0000815,2.42e-08,2;CL:0000792,2.42e-08,2;CL:0002677,2.42e-08,2;CL:0000219,2.73e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.72e-54;42!CL:0000049;1.38e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.42e-37!102;UBERON:0003061!1.42e-37!102;UBERON:0002193!6.58e-36!112;UBERON:0002371!1.20e-28!80;UBERON:0001474!1.87e-25!86;UBERON:0002405!3.28e-23!115;UBERON:0004765!3.34e-20!101;UBERON:0001434!3.34e-20!101;UBERON:0003081!3.16e-10!216;UBERON:0002384!6.11e-08!375;UBERON:0002204!1.81e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.42e-37!102;UBERON:0003061!1.42e-37!102;UBERON:0002193!6.58e-36!112;UBERON:0002371!1.20e-28!80;UBERON:0001474!1.87e-25!86;UBERON:0002405!3.28e-23!115;UBERON:0004765!3.34e-20!101;UBERON:0001434!3.34e-20!101;UBERON:0003081!3.16e-10!216;UBERON:0002384!6.11e-08!375;UBERON:0002204!1.81e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.21e-08;2!UBERON:0005058;4.21e-08;2!UBERON:0009113;4.21e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-38,76;UBERON:0001474,2.78e-35,82;UBERON:0002390,6.04e-35,98;UBERON:0003061,6.04e-35,98;UBERON:0002405,8.15e-35,93;UBERON:0004765,1.66e-31,90;UBERON:0002193,5.54e-31,108;UBERON:0001434,1.24e-27,100;UBERON:0002204,1.23e-13,167;UBERON:0003081,8.49e-13,203;UBERON:0002384,4.88e-08,371 | |||
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|short_description=p8@CCRL2 | |short_description=p8@CCRL2 | ||
}} | }} |
Latest revision as of 11:02, 18 September 2015
Short description: | p8@CCRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCRL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -10bp_to_ENST00000399036_5end |
EntrezGene: | CCRL2 |
HGNC: | 1612 |
UniProt: | O00421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.05e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.05e-72 | 42 |
defensive cell | 1.24e-66 | 48 |
phagocyte | 1.24e-66 | 48 |
monopoietic cell | 9.26e-52 | 59 |
monocyte | 9.26e-52 | 59 |
monoblast | 9.26e-52 | 59 |
promonocyte | 9.26e-52 | 59 |
macrophage dendritic cell progenitor | 7.68e-50 | 61 |
myeloid leukocyte | 4.10e-47 | 72 |
myeloid lineage restricted progenitor cell | 1.52e-45 | 66 |
granulocyte monocyte progenitor cell | 9.21e-45 | 67 |
leukocyte | 5.66e-38 | 136 |
nongranular leukocyte | 5.24e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 4.16e-35 | 120 |
myeloid cell | 3.61e-33 | 108 |
common myeloid progenitor | 3.61e-33 | 108 |
hematopoietic oligopotent progenitor cell | 1.22e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-30 | 161 |
hematopoietic stem cell | 5.63e-29 | 168 |
hematopoietic cell | 4.99e-27 | 177 |
mesenchymal cell | 7.33e-09 | 354 |
connective tissue cell | 1.64e-08 | 361 |
regulatory T cell | 2.42e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.42e-08 | 2 |
naive regulatory T cell | 2.42e-08 | 2 |
motile cell | 2.73e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.25e-38 | 76 |
bone element | 2.78e-35 | 82 |
hematopoietic system | 6.04e-35 | 98 |
blood island | 6.04e-35 | 98 |
immune system | 8.15e-35 | 93 |
skeletal element | 1.66e-31 | 90 |
hemolymphoid system | 5.54e-31 | 108 |
skeletal system | 1.24e-27 | 100 |
musculoskeletal system | 1.23e-13 | 167 |
lateral plate mesoderm | 8.49e-13 | 203 |
connective tissue | 4.88e-08 | 371 |