FFCP PHASE1:Hg19::chr3:46448155..46448177,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9034 | |EntrezGene=9034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1612 | |HGNC=1612 | ||
|TSSclassifier=strong | |||
|UniProt=O00421 | |UniProt=O00421 | ||
|association_with_transcript=-476bp_to_ENST00000399036_5end | |association_with_transcript=-476bp_to_ENST00000399036_5end | ||
|cluster_id=chr3:46448155..46448177,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_11_at_CCRL2_5end | |description=CAGE_peak_11_at_CCRL2_5end | ||
|id=chr3:46448155..46448177,+ | |id=chr3:46448155..46448177,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.63e-132!42;CL:0000860!3.88e-123!45;CL:0000766!6.74e-99!76;CL:0002194!1.22e-93!63;CL:0000576!1.22e-93!63;CL:0000040!1.22e-93!63;CL:0000559!1.22e-93!63;CL:0002009!1.51e-90!65;CL:0000839!1.40e-83!70;CL:0000557!2.64e-82!71;CL:0000763!1.33e-64!112;CL:0000049!1.33e-64!112;CL:0000738!3.17e-55!140;CL:0002087!2.38e-51!119;CL:0002031!7.96e-44!124;CL:0000037!2.35e-43!172;CL:0000566!2.35e-43!172;CL:0002032!3.78e-41!165;CL:0000837!3.78e-41!165;CL:0000988!1.70e-40!182;CL:0002393!2.65e-21!9;CL:0002397!2.65e-21!9;CL:0000134!3.16e-17!358;CL:0002320!1.02e-16!365;CL:0000219!6.26e-15!390;CL:0000767!4.31e-13!3;CL:0000094!6.23e-13!8;CL:0000048!8.71e-13!430;CL:0000723!1.76e-12!436;CL:0000034!4.35e-12!444;CL:0000771!1.79e-09!2;CL:0000081!2.49e-09!11;CL:0000063!4.52e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.63e-132!42;CL:0000860!3.88e-123!45;CL:0000766!6.74e-99!76;CL:0002194!1.22e-93!63;CL:0000576!1.22e-93!63;CL:0000040!1.22e-93!63;CL:0000559!1.22e-93!63;CL:0002009!1.51e-90!65;CL:0000839!1.40e-83!70;CL:0000557!2.64e-82!71;CL:0000763!1.33e-64!112;CL:0000049!1.33e-64!112;CL:0000738!3.17e-55!140;CL:0002087!2.38e-51!119;CL:0002031!7.96e-44!124;CL:0000037!2.35e-43!172;CL:0000566!2.35e-43!172;CL:0002032!3.78e-41!165;CL:0000837!3.78e-41!165;CL:0000988!1.70e-40!182;CL:0002393!2.65e-21!9;CL:0002397!2.65e-21!9;CL:0000134!3.16e-17!358;CL:0002320!1.02e-16!365;CL:0000219!6.26e-15!390;CL:0000767!4.31e-13!3;CL:0000094!6.23e-13!8;CL:0000048!8.71e-13!430;CL:0000723!1.76e-12!436;CL:0000034!4.35e-12!444;CL:0000771!1.79e-09!2;CL:0000081!2.49e-09!11;CL:0000063!4.52e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.97e-114;33!CL:0002057;6.97e-114;33!CL:0000473;2.79e-78;39!CL:0000234;2.79e-78;39!CL:0000576;3.34e-66;48!CL:0000766;6.14e-40;69!CL:0000763;1.06e-21;100!CL:0002087;3.27e-16;104!CL:0000771;1.74e-12;2!CL:0000094;1.19e-11;8!CL:0000738;2.36e-11;136!CL:0002393;4.54e-09;6!CL:0002397;4.54e-09;6!CL:0000767;1.53e-08;3!CL:0000081;1.64e-08;11!CL:0000988;1.92e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.83e-122,42;CL:0002057,6.83e-122,42;CL:0000473,5.41e-106,48;CL:0000234,5.41e-106,48;CL:0000766,4.35e-88,72;CL:0002194,1.00e-83,59;CL:0000576,1.00e-83,59;CL:0000040,1.00e-83,59;CL:0000559,1.00e-83,59;CL:0002009,7.50e-81,61;CL:0000839,2.05e-74,66;CL:0000557,3.05e-73,67;CL:0000763,3.62e-57,108;CL:0000049,3.62e-57,108;CL:0000738,2.45e-44,136;CL:0002087,1.14e-40,115;CL:0002031,9.23e-39,120;CL:0002032,1.28e-36,161;CL:0000837,1.28e-36,161;CL:0000037,7.25e-35,168;CL:0000988,8.18e-33,177;CL:0000134,1.60e-13,354;CL:0002320,3.81e-13,361;CL:0000771,1.74e-12,2;CL:0000219,8.20e-12,386;CL:0000094,1.14e-11,8;CL:0000048,3.52e-10,427;CL:0000723,5.91e-10,433;CL:0000034,1.16e-09,441;CL:0000767,1.44e-08,3;CL:0000081,1.59e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.33e-88;42!CL:0000049;4.55e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.17e-72!80;UBERON:0001474!1.15e-66!86;UBERON:0002390!3.00e-61!102;UBERON:0003061!3.00e-61!102;UBERON:0004765!1.28e-55!101;UBERON:0001434!1.28e-55!101;UBERON:0002193!4.58e-55!112;UBERON:0002405!6.95e-48!115;UBERON:0002204!1.99e-30!167;UBERON:0003081!1.69e-24!216;UBERON:0002384!5.00e-16!375;UBERON:0000926!2.80e-07!448;UBERON:0004120!2.80e-07!448;UBERON:0006603!2.80e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!3.17e-72!80;UBERON:0001474!1.15e-66!86;UBERON:0002390!3.00e-61!102;UBERON:0003061!3.00e-61!102;UBERON:0004765!1.28e-55!101;UBERON:0001434!1.28e-55!101;UBERON:0002193!4.58e-55!112;UBERON:0002405!6.95e-48!115;UBERON:0002204!1.99e-30!167;UBERON:0003081!1.69e-24!216;UBERON:0002384!5.00e-16!375;UBERON:0000926!2.80e-07!448;UBERON:0004120!2.80e-07!448;UBERON:0006603!2.80e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.77e-64,76;UBERON:0001474,5.03e-59,82;UBERON:0004765,2.35e-53,90;UBERON:0002405,1.77e-51,93;UBERON:0002390,1.33e-48,98;UBERON:0003061,1.33e-48,98;UBERON:0001434,1.57e-47,100;UBERON:0002193,1.23e-43,108;UBERON:0002204,2.36e-26,167;UBERON:0003081,1.06e-20,203;UBERON:0002384,1.25e-12,371;UBERON:0000926,2.55e-11,315;UBERON:0004120,2.55e-11,315;UBERON:0006603,2.55e-11,315 | |||
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| ||
|short_description=p11@CCRL2 | |short_description=p11@CCRL2 | ||
}} | }} |
Latest revision as of 11:00, 18 September 2015
Short description: | p11@CCRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CCRL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -476bp_to_ENST00000399036_5end |
EntrezGene: | CCRL2 |
HGNC: | 1612 |
UniProt: | O00421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.83e-122 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.83e-122 | 42 |
defensive cell | 5.41e-106 | 48 |
phagocyte | 5.41e-106 | 48 |
myeloid leukocyte | 4.35e-88 | 72 |
monopoietic cell | 1.00e-83 | 59 |
monocyte | 1.00e-83 | 59 |
monoblast | 1.00e-83 | 59 |
promonocyte | 1.00e-83 | 59 |
macrophage dendritic cell progenitor | 7.50e-81 | 61 |
myeloid lineage restricted progenitor cell | 2.05e-74 | 66 |
granulocyte monocyte progenitor cell | 3.05e-73 | 67 |
myeloid cell | 3.62e-57 | 108 |
common myeloid progenitor | 3.62e-57 | 108 |
leukocyte | 2.45e-44 | 136 |
nongranular leukocyte | 1.14e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 9.23e-39 | 120 |
hematopoietic oligopotent progenitor cell | 1.28e-36 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-36 | 161 |
hematopoietic stem cell | 7.25e-35 | 168 |
hematopoietic cell | 8.18e-33 | 177 |
mesenchymal cell | 1.60e-13 | 354 |
connective tissue cell | 3.81e-13 | 361 |
eosinophil | 1.74e-12 | 2 |
motile cell | 8.20e-12 | 386 |
granulocyte | 1.14e-11 | 8 |
multi fate stem cell | 3.52e-10 | 427 |
somatic stem cell | 5.91e-10 | 433 |
stem cell | 1.16e-09 | 441 |
basophil | 1.44e-08 | 3 |
blood cell | 1.59e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.77e-64 | 76 |
bone element | 5.03e-59 | 82 |
skeletal element | 2.35e-53 | 90 |
immune system | 1.77e-51 | 93 |
hematopoietic system | 1.33e-48 | 98 |
blood island | 1.33e-48 | 98 |
skeletal system | 1.57e-47 | 100 |
hemolymphoid system | 1.23e-43 | 108 |
musculoskeletal system | 2.36e-26 | 167 |
lateral plate mesoderm | 1.06e-20 | 203 |
connective tissue | 1.25e-12 | 371 |
mesoderm | 2.55e-11 | 315 |
mesoderm-derived structure | 2.55e-11 | 315 |
presumptive mesoderm | 2.55e-11 | 315 |