FFCP PHASE1:Hg19::chr11:57559005..57559026,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:57559005..57559026,+ to FFCP PHASE1:Hg19::chr11:57559005..57559026,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1500 | |EntrezGene=1500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2515 | |HGNC=2515 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRE2 | |UniProt=E9PRE2 | ||
|association_with_transcript=-4bp_to_ENST00000534647_5end | |||
|cluster_id=chr11:57559005..57559026,+ | |||
|coexpression_cluster_id=C2139 | |||
|description=CAGE_peak_5_at_CTNND1_5end | |||
|id=chr11:57559005..57559026,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.31e-18!42;CL:0000860!4.67e-16!45;CL:0002009!1.63e-12!65;CL:0000763!5.40e-11!112;CL:0000049!5.40e-11!112;CL:0002194!5.84e-11!63;CL:0000576!5.84e-11!63;CL:0000040!5.84e-11!63;CL:0000559!5.84e-11!63;CL:0000557!1.36e-10!71;CL:0000839!1.03e-09!70;CL:0000766!5.24e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.20e-16;3!CL:0002396;1.20e-16;3!CL:0002327;6.76e-13;4!CL:0001014;1.93e-12;2!CL:0001016;1.93e-12;2!CL:0002541;1.06e-07;3!CL:0000313;6.42e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.11e-16,3;CL:0002396,1.11e-16,3;CL:0002327,7.79e-13,4;CL:0001014,1.93e-12,2;CL:0001016,1.93e-12,2;CL:0000860,1.75e-08,42;CL:0002057,1.75e-08,42;CL:0002009,3.62e-08,61;CL:0002541,9.19e-08,3;CL:0000557,2.85e-07,67;CL:0000473,3.03e-07,48;CL:0000234,3.03e-07,48;CL:0000313,6.80e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.11e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.28e-30;14!DOID:3111;5.43e-07;1!DOID:3603;5.43e-07;1!DOID:2152;6.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.20e-30,14;DOID:305,1.47e-12,106;DOID:0050687,2.61e-08,143;DOID:3111,5.43e-07,1;DOID:3603,5.43e-07,1;DOID:2152,6.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.60e-08!80;UBERON:0002390!4.94e-08!102;UBERON:0003061!4.94e-08!102;UBERON:0001474!1.35e-07!86;UBERON:0002193!1.58e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.76e-13;4!UBERON:0003124;1.06e-07;3!UBERON:0000920;1.06e-07;3!UBERON:0002294;2.82e-07;7!UBERON:0001173;2.82e-07;7!UBERON:0000997;5.13e-07;1!UBERON:0005056;5.13e-07;1!UBERON:0004176;5.13e-07;1!UBERON:0004911;6.42e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.79e-13,4;UBERON:0005333,7.79e-13,4;UBERON:0008425,7.79e-13,4;UBERON:0005311,7.79e-13,4;UBERON:0000920,9.19e-08,3;UBERON:0000997,5.13e-07,1;UBERON:0005056,5.13e-07,1;UBERON:0004911,6.80e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,1.01778767145695,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,1.18241114944293,0.344745680736619,0.645484683583826,0,0.941211697713023,1.63743690034707,0.674170453335254,0.612167784741805,0.962787081228281,1.91801137739712,0,0.199463657621632,2.13112375266347,0,0.56738522469114,1.24564449799115,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0,0,0,3.42015292489498,3.58050018958362,2.73996230646951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,1.09098448236334,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,3.40322386270824,5.23141089325132,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0.59873811429845,0.383010740264733,0.423347165447766,0,0,0,0.156679895773023,0,0,0.481764225311099,0,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,3.75944466818779,0,0.0986434056369336,0,0,0,0,0,0,0,0,4.77932482799099,0,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0.922255617552241,0,0.108647371922008,1.27600463892768,0.0915975934018623,1.5991043280559,0,0.470940769185074,0,0,0,0,0,0.158936578980379,0,3.4278889713421,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,24.2041221613513,36.1295707308671,0.17472666824203,0,0,0,0,0,0,0,0,0,0,2.54216797555244,0,0,0,0,0,0.171594997861965,0,0,7.07082103850386,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,32.8461881665191,30.17827622776,0,0,1.26089131678717,0,0,0.179287339332845,0.767660789277781,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,41.4921817550618,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0.245772908753719,11.6221667847245,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,2.56800037930351,7.04706563517063,0,0,0,0.0752103283492573,0,0,0.261906694481422,1.31017534008077,1.03499260351932,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.443511850813194,0.115233987555779,0,0.203909198930495,0,0,0,0.156986185701028,0,0.840816489941367,0,0.863710364874486,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,7.04689220326092,0.098150233615243,0.975343399858155,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.515663103788617,0,9.46335874609985,4.58763333230399,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.509944148709909,0,0.18378979906969,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0.202117188958219,0.435433495793923,0.342233301085281,0.5388164241167,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,1.01778767145695,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,1.18241114944293,0.344745680736619,0.645484683583826,0,0.941211697713023,1.63743690034707,0.674170453335254,0.612167784741805,0.962787081228281,1.91801137739712,0,0.199463657621632,2.13112375266347,0,0.56738522469114,1.24564449799115,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0,0,0,3.42015292489498,3.58050018958362,2.73996230646951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,1.09098448236334,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,3.40322386270824,5.23141089325132,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0.59873811429845,0.383010740264733,0.423347165447766,0,0,0,0.156679895773023,0,0,0.481764225311099,0,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,3.75944466818779,0,0.0986434056369336,0,0,0,0,0,0,0,0,4.77932482799099,0,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0.922255617552241,0,0.108647371922008,1.27600463892768,0.0915975934018623,1.5991043280559,0,0.470940769185074,0,0,0,0,0,0.158936578980379,0,3.4278889713421,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,24.2041221613513,36.1295707308671,0.17472666824203,0,0,0,0,0,0,0,0,0,0,2.54216797555244,0,0,0,0,0,0.171594997861965,0,0,7.07082103850386,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,32.8461881665191,30.17827622776,0,0,1.26089131678717,0,0,0.179287339332845,0.767660789277781,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,41.4921817550618,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0.245772908753719,11.6221667847245,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,2.56800037930351,7.04706563517063,0,0,0,0.0752103283492573,0,0,0.261906694481422,1.31017534008077,1.03499260351932,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.443511850813194,0.115233987555779,0,0.203909198930495,0,0,0,0.156986185701028,0,0.840816489941367,0,0.863710364874486,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,7.04689220326092,0.098150233615243,0.975343399858155,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.515663103788617,0,9.46335874609985,4.58763333230399,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.509944148709909,0,0.18378979906969,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0.202117188958219,0.435433495793923,0.342233301085281,0.5388164241167,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@CTNND1 | |||
}} | }} |
Latest revision as of 11:00, 18 September 2015
Short description: | p5@CTNND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTNND1_5end |
Coexpression cluster: | C2139_malignant_immature_epidermoid_mucinous_squamous_serous_oral |
Association with transcript: | -4bp_to_ENST00000534647_5end |
EntrezGene: | CTNND1 |
HGNC: | 2515 |
UniProt: | E9PRE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.11e-16 | 3 |
CD14-low, CD16-positive monocyte | 1.11e-16 | 3 |
mammary gland epithelial cell | 7.79e-13 | 4 |
CD1a-positive Langerhans cell | 1.93e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.93e-12 | 2 |
classical monocyte | 1.75e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.75e-08 | 42 |
macrophage dendritic cell progenitor | 3.62e-08 | 61 |
chorionic membrane mesenchymal stem cell | 9.19e-08 | 3 |
granulocyte monocyte progenitor cell | 2.85e-07 | 67 |
defensive cell | 3.03e-07 | 48 |
phagocyte | 3.03e-07 | 48 |
serous secreting cell | 6.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.79e-13 | 4 |
mammary bud | 7.79e-13 | 4 |
mammary ridge | 7.79e-13 | 4 |
mammary placode | 7.79e-13 | 4 |
egg chorion | 9.19e-08 | 3 |
mammalian vulva | 5.13e-07 | 1 |
external female genitalia | 5.13e-07 | 1 |
epithelium of female gonad | 6.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.20e-30 | 14 |
carcinoma | 1.47e-12 | 106 |
cell type cancer | 2.61e-08 | 143 |
cystadenocarcinoma | 5.43e-07 | 1 |
mucinous cystadenocarcinoma | 5.43e-07 | 1 |
ovary epithelial cancer | 6.80e-07 | 1 |