FFCP PHASE1:Hg19::chr1:47881953..47881958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2301 | |EntrezGene=2301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3808 | |HGNC=3808 | ||
|TSSclassifier=strong | |||
|UniProt=Q13461 | |UniProt=Q13461 | ||
|association_with_transcript=209bp_to_ENST00000335071,NM_012186,uc001crk.2_5end | |association_with_transcript=209bp_to_ENST00000335071,NM_012186,uc001crk.2_5end | ||
|cluster_id=chr1:47881953..47881958,+ | |||
|coexpression_cluster_id=C185 | |coexpression_cluster_id=C185 | ||
|description=CAGE_peak_1_at_FOXE3_5end | |description=CAGE_peak_1_at_FOXE3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!7.09e-13!5;CL:0000819!5.05e-08!1 | |ontology_enrichment_celltype=CL:0002322!7.09e-13!5;CL:0000819!5.05e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.00e-13;4!CL:0002222;1.00e-13;4!CL:0002224;1.00e-13;4!CL:0002322;3.60e-11;5!CL:0000075;2.22e-08;27 | |ontology_enrichment_celltype_v019=CL:0000306;1.00e-13;4!CL:0002222;1.00e-13;4!CL:0002224;1.00e-13;4!CL:0002322;3.60e-11;5!CL:0000075;2.22e-08;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.00e-13,4;CL:0002222,1.00e-13,4;CL:0002224,1.00e-13,4;CL:0002322,3.60e-11,5;CL:0000075,2.22e-08,27 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060073!5.05e-08!1;DOID:8675!5.05e-08!1 | |ontology_enrichment_disease=DOID:0060073!5.05e-08!1;DOID:8675!5.05e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.32e-13!8;UBERON:0003135!9.21e-10!11;UBERON:0002426!2.19e-08!1;UBERON:0003831!2.19e-08!1;UBERON:0003898!2.19e-08!1;UBERON:0004830!2.19e-08!1;UBERON:0001774!2.19e-08!1;UBERON:0003830!2.19e-08!1;UBERON:0005175!2.19e-08!1;UBERON:0003897!2.19e-08!1;UBERON:0001103!2.19e-08!1;UBERON:0010084!2.19e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0002370!1.26e-07!4;UBERON:0005058!1.26e-07!4;UBERON:0009113!1.26e-07!4;UBERON:0003295!1.26e-07!4;UBERON:0005562!1.26e-07!4 | |ontology_enrichment_uberon=UBERON:0000473!2.32e-13!8;UBERON:0003135!9.21e-10!11;UBERON:0002426!2.19e-08!1;UBERON:0003831!2.19e-08!1;UBERON:0003898!2.19e-08!1;UBERON:0004830!2.19e-08!1;UBERON:0001774!2.19e-08!1;UBERON:0003830!2.19e-08!1;UBERON:0005175!2.19e-08!1;UBERON:0003897!2.19e-08!1;UBERON:0001103!2.19e-08!1;UBERON:0010084!2.19e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0002370!1.26e-07!4;UBERON:0005058!1.26e-07!4;UBERON:0009113!1.26e-07!4;UBERON:0003295!1.26e-07!4;UBERON:0005562!1.26e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.00e-13;4!UBERON:0005389;1.00e-13;4!UBERON:0000484;1.00e-13;4!UBERON:0000965;1.00e-13;4!UBERON:0001803;1.00e-13;4!UBERON:0000970;5.70e-11;20!UBERON:0002104;1.69e-10;21!UBERON:0000020;1.12e-09;23!UBERON:0001032;2.56e-09;24!UBERON:0004456;2.56e-09;24 | |ontology_enrichment_uberon_v019=UBERON:0010077;1.00e-13;4!UBERON:0005389;1.00e-13;4!UBERON:0000484;1.00e-13;4!UBERON:0000965;1.00e-13;4!UBERON:0001803;1.00e-13;4!UBERON:0000970;5.70e-11;20!UBERON:0002104;1.69e-10;21!UBERON:0000020;1.12e-09;23!UBERON:0001032;2.56e-09;24!UBERON:0004456;2.56e-09;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.00e-13,4;UBERON:0005389,1.00e-13,4;UBERON:0000484,1.00e-13,4;UBERON:0002546,1.00e-13,4;UBERON:0000965,1.00e-13,4;UBERON:0001803,1.00e-13,4;UBERON:0003073,1.00e-13,4;UBERON:0005426,1.00e-13,4;UBERON:0000970,1.69e-10,21;UBERON:0002104,1.69e-10,21;UBERON:0000020,2.56e-09,24;UBERON:0001032,2.56e-09,24;UBERON:0004456,2.56e-09,24;UBERON:0000076,1.59e-07,8 | |||
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|short_description=p1@FOXE3 | |short_description=p1@FOXE3 | ||
}} | }} |
Latest revision as of 10:12, 18 September 2015
Short description: | p1@FOXE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXE3_5end |
Coexpression cluster: | C185_small_adrenal_gastric_Mesenchymal_acute_HES3GFP_testis |
Association with transcript: | 209bp_to_ENST00000335071, NM_012186, uc001crk.2_5end |
EntrezGene: | FOXE3 |
HGNC: | 3808 |
UniProt: | Q13461 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.00e-13 | 4 |
vertebrate lens cell | 1.00e-13 | 4 |
lens epithelial cell | 1.00e-13 | 4 |
embryonic stem cell | 3.60e-11 | 5 |
columnar/cuboidal epithelial cell | 2.22e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.00e-13 | 4 |
transparent eye structure | 1.00e-13 | 4 |
simple cuboidal epithelium | 1.00e-13 | 4 |
cranial placode | 1.00e-13 | 4 |
lens of camera-type eye | 1.00e-13 | 4 |
epithelium of lens | 1.00e-13 | 4 |
lens placode | 1.00e-13 | 4 |
lens vesicle | 1.00e-13 | 4 |
eye | 1.69e-10 | 21 |
visual system | 1.69e-10 | 21 |
sense organ | 2.56e-09 | 24 |
sensory system | 2.56e-09 | 24 |
entire sense organ system | 2.56e-09 | 24 |
external ectoderm | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |