FFCP PHASE1:Hg19::chr8:48873453..48873475,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:48873453..48873475,+ to FFCP PHASE1:Hg19::chr8:48873453..48873475,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4173 | |EntrezGene=4173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6947 | |HGNC=6947 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000523944_5end | |||
|cluster_id=chr8:48873453..48873475,+ | |||
|description=CAGE_peak_2_at_MCM4_5end | |||
|id=chr8:48873453..48873475,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.88e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.56e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.52e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.85e-25!235;DOID:14566!1.06e-24!239;DOID:2531!9.56e-18!51;DOID:0060083!9.56e-18!51;DOID:1240!5.42e-15!39;DOID:0050687!2.25e-13!143;DOID:0050686!4.21e-13!137;DOID:8692!2.59e-12!31;DOID:305!8.66e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.43e-12;39!DOID:8692;7.91e-12;31!DOID:2531;4.59e-11;51!DOID:0060083;4.59e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.39e-25,235;DOID:14566,5.35e-25,239;DOID:2531,3.62e-18,51;DOID:0060083,3.62e-18,51;DOID:1240,2.26e-15,39;DOID:0050687,2.05e-13,143;DOID:0050686,4.26e-13,137;DOID:8692,1.28e-12,31;DOID:305,1.29e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-09!94;UBERON:0001016!1.01e-09!94;UBERON:0001017!5.35e-09!82;UBERON:0005743!1.30e-08!86;UBERON:0000924!5.44e-08!173;UBERON:0006601!5.44e-08!173;UBERON:0004121!2.70e-07!169;UBERON:0000064!6.03e-07!219;UBERON:0001893!7.87e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.50e-11,89;UBERON:0001017,8.00e-10,81;UBERON:0004121,4.40e-08,171;UBERON:0000924,4.40e-08,171;UBERON:0006601,4.40e-08,171;UBERON:0001893,4.02e-07,34;UBERON:0001869,6.05e-07,32;UBERON:0000955,8.52e-07,68;UBERON:0006238,8.52e-07,68 | |||
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| ||
|short_description=p2@MCM4 | |||
}} | }} |
Latest revision as of 10:06, 18 September 2015
Short description: | p2@MCM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MCM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000523944_5end |
EntrezGene: | MCM4 |
HGNC: | 6947 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.52e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.50e-11 | 89 |
central nervous system | 8.00e-10 | 81 |
ectoderm-derived structure | 4.40e-08 | 171 |
ectoderm | 4.40e-08 | 171 |
presumptive ectoderm | 4.40e-08 | 171 |
telencephalon | 4.02e-07 | 34 |
cerebral hemisphere | 6.05e-07 | 32 |
brain | 8.52e-07 | 68 |
future brain | 8.52e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.39e-25 | 235 |
disease of cellular proliferation | 5.35e-25 | 239 |
hematologic cancer | 3.62e-18 | 51 |
immune system cancer | 3.62e-18 | 51 |
leukemia | 2.26e-15 | 39 |
cell type cancer | 2.05e-13 | 143 |
organ system cancer | 4.26e-13 | 137 |
myeloid leukemia | 1.28e-12 | 31 |
carcinoma | 1.29e-10 | 106 |