FFCP PHASE1:Hg19::chr19:42947091..42947108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284340 | |EntrezGene=284340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19232 | |HGNC=19232 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXB2 | |UniProt=Q6UXB2 | ||
|association_with_transcript=27bp_to_ENST00000341918,NM_198477,uc002otu.2_5end | |association_with_transcript=27bp_to_ENST00000341918,NM_198477,uc002otu.2_5end | ||
|cluster_id=chr19:42947091..42947108,- | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_1_at_CXCL17_5end | |description=CAGE_peak_1_at_CXCL17_5end | ||
|id=chr19:42947091..42947108,- | |id=chr19:42947091..42947108,- | ||
|ontology_enrichment_celltype=CL:0002076!2.02e-25!43;CL:0000223!1.66e-19!59;CL:0002368!3.13e-14!13;CL:0002251!8.45e-12!21;CL:0000244!1.09e-08!4;CL:0000731!1.09e-08!4;CL:0002202!1.95e-07!9;CL:0002632!1.95e-07!9;CL:0000068!6.61e-07!3;CL:0000069!6.61e-07!3;CL:0000307!6.61e-07!3;CL:0000377!6.61e-07!3;CL:0002231!7.59e-07!3 | |ontology_enrichment_celltype=CL:0002076!2.02e-25!43;CL:0000223!1.66e-19!59;CL:0002368!3.13e-14!13;CL:0002251!8.45e-12!21;CL:0000244!1.09e-08!4;CL:0000731!1.09e-08!4;CL:0002202!1.95e-07!9;CL:0002632!1.95e-07!9;CL:0000068!6.61e-07!3;CL:0000069!6.61e-07!3;CL:0000307!6.61e-07!3;CL:0000377!6.61e-07!3;CL:0002231!7.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.27e-15;42!CL:0002368;1.49e-14;13!CL:0000244;1.11e-12;4!CL:0000731;1.11e-12;4!CL:0000307;6.78e-10;3!CL:0002231;7.44e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.05e-19,42;CL:0000223,4.72e-16,58;CL:0002368,1.33e-14,13;CL:0000244,9.79e-13,4;CL:0000731,9.79e-13,4;CL:0000068,5.99e-10,3;CL:0000069,5.99e-10,3;CL:0000307,5.99e-10,3;CL:0000377,5.99e-10,3;CL:0002231,7.44e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.78e-10;3!CL:0000223;5.06e-09;58!UBERON:0006595;5.28e-08;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.29e-28!169;UBERON:0000925!1.29e-28!169;UBERON:0006595!1.29e-28!169;UBERON:0001007!4.38e-21!155;UBERON:0001555!4.38e-21!155;UBERON:0007026!4.38e-21!155;UBERON:0004921!8.40e-19!129;UBERON:0004185!8.40e-19!129;UBERON:0000077!1.27e-18!130;UBERON:0001004!2.99e-18!72;UBERON:0000161!5.04e-17!35;UBERON:0001041!3.00e-13!98;UBERON:0005911!3.85e-13!82;UBERON:0000065!4.34e-13!53;UBERON:0007023!6.58e-13!115;UBERON:0000166!1.65e-12!21;UBERON:0000464!1.25e-10!104;UBERON:0000466!2.35e-10!126;UBERON:0000165!5.80e-10!28;UBERON:0000930!5.80e-10!28;UBERON:0000365!5.87e-10!5;UBERON:0005178!7.37e-09!34;UBERON:0002224!7.37e-09!34;UBERON:0003408!1.38e-08!10;UBERON:0005181!1.67e-08!35;UBERON:0003104!1.76e-08!238;UBERON:0009142!1.76e-08!238;UBERON:0007196!2.98e-08!14;UBERON:0001558!2.98e-08!14;UBERON:0005910!3.24e-08!6;UBERON:0001044!3.29e-08!6;UBERON:0003293!3.29e-08!6;UBERON:0003294!3.29e-08!6;UBERON:0010047!3.29e-08!6;UBERON:0000167!3.29e-08!6;UBERON:0001008!3.49e-08!45;UBERON:0000481!3.99e-08!347;UBERON:0006562!6.70e-08!11;UBERON:0003126!9.85e-08!7;UBERON:0001005!9.85e-08!7;UBERON:0000922!1.73e-07!612;UBERON:0000078!2.04e-07!18;UBERON:0006554!2.80e-07!44;UBERON:0001444!5.24e-07!48;UBERON:0005177!5.57e-07!107;UBERON:0003929!6.55e-07!54;UBERON:0001046!7.76e-07!19;UBERON:0000344!7.84e-07!12;UBERON:0002050!9.11e-07!605;UBERON:0005423!9.11e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;6.23e-13;14!UBERON:0001044;2.51e-12;6!UBERON:0003293;2.51e-12;6!UBERON:0003294;2.51e-12;6!UBERON:0010047;2.51e-12;6!UBERON:0003408;2.51e-12;6!UBERON:0000167;2.51e-12;6!UBERON:0003126;1.30e-11;7!UBERON:0001005;1.30e-11;7!UBERON:0004921;2.61e-11;33!UBERON:0005178;2.63e-10;34!UBERON:0002224;2.63e-10;34!UBERON:0000365;3.71e-10;5!UBERON:0005181;5.36e-09;35!UBERON:0000065;1.34e-08;44!UBERON:0005910;1.81e-08;6!UBERON:0003127;3.06e-08;2!UBERON:0000341;1.11e-07;2!UBERON:0006562;1.39e-07;2!UBERON:0000165;2.79e-07;28!UBERON:0007196;3.67e-07;15!UBERON:0001558;3.67e-07;15!UBERON:0001829;4.60e-07;2!UBERON:0000161;6.64e-07;19!UBERON:0000166;6.64e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.82e-27,160;UBERON:0000925,2.82e-27,160;UBERON:0006595,2.82e-27,160;UBERON:0004921,7.60e-22,118;UBERON:0001007,1.05e-18,145;UBERON:0001555,1.05e-18,145;UBERON:0007026,1.05e-18,145;UBERON:0001004,6.14e-17,74;UBERON:0001041,3.41e-16,87;UBERON:0000161,1.17e-15,36;UBERON:0000065,1.85e-13,54;UBERON:0001044,3.26e-12,6;UBERON:0003293,3.26e-12,6;UBERON:0003294,3.26e-12,6;UBERON:0010047,3.26e-12,6;UBERON:0000167,3.26e-12,6;UBERON:0003126,1.19e-11,7;UBERON:0001005,1.19e-11,7;UBERON:0005178,3.19e-11,34;UBERON:0002224,3.19e-11,34;UBERON:0005181,7.98e-11,35;UBERON:0000365,3.36e-10,5;UBERON:0005911,3.54e-10,82;UBERON:0000166,1.17e-09,22;UBERON:0005910,1.67e-08,6;UBERON:0003127,3.06e-08,2;UBERON:0011216,3.31e-08,223;UBERON:0000341,1.09e-07,2;UBERON:0005177,1.54e-07,101;UBERON:0000162,1.79e-07,14;UBERON:0001353,1.79e-07,14;UBERON:0000163,1.79e-07,14;UBERON:0006866,1.79e-07,14;UBERON:0000164,1.79e-07,14;UBERON:0000931,1.79e-07,14;UBERON:0003064,2.26e-07,28;UBERON:0007023,3.24e-07,114;UBERON:0003408,3.26e-07,10;UBERON:0007196,3.46e-07,15;UBERON:0001558,3.46e-07,15;UBERON:0001046,4.61e-07,19;UBERON:0001829,4.89e-07,2;UBERON:0000165,6.10e-07,29;UBERON:0000930,6.10e-07,29;UBERON:0004122,6.28e-07,15 | |||
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| ||
|short_description=p1@CXCL17 | |short_description=p1@CXCL17 | ||
}} | }} |
Latest revision as of 09:41, 18 September 2015
Short description: | p1@CXCL17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCL17_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 27bp_to_ENST00000341918, NM_198477, uc002otu.2_5end |
EntrezGene: | CXCL17 |
HGNC: | 19232 |
UniProt: | Q6UXB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.05e-19 | 42 |
endodermal cell | 4.72e-16 | 58 |
respiratory epithelial cell | 1.33e-14 | 13 |
transitional epithelial cell | 9.79e-13 | 4 |
urothelial cell | 9.79e-13 | 4 |
duct epithelial cell | 5.99e-10 | 3 |
branched duct epithelial cell | 5.99e-10 | 3 |
tracheal epithelial cell | 5.99e-10 | 3 |
tracheoblast | 5.99e-10 | 3 |
epithelial cell of prostate | 7.44e-10 | 3 |