FFCP PHASE1:Hg19::chr15:59949667..59949690,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4647 | |||
|TSSclassifier=strong | |||
|UniProt=P52657 | |||
|association_with_transcript=0bp_to_ENST00000396061,ENST00000472508,ENST00000559141_5end | |||
|cluster_id=chr15:59949667..59949690,- | |||
|description=CAGE_peak_2_at_GTF2A2_5end | |||
|id=chr15:59949667..59949690,- | |||
|ontology_enrichment_celltype=CL:0000037!2.04e-29!172;CL:0000566!2.04e-29!172;CL:0000988!1.09e-28!182;CL:0000012!1.22e-27!682;CL:0002032!1.27e-27!165;CL:0000837!1.27e-27!165;CL:0000003!3.52e-27!722;CL:0000548!4.76e-26!679;CL:0000004!4.76e-26!679;CL:0000255!4.76e-26!679;CL:0000144!1.01e-23!625;CL:0000219!2.09e-22!390;CL:0000134!1.18e-19!358;CL:0000063!5.38e-19!578;CL:0000034!5.81e-19!444;CL:0002320!4.33e-18!365;CL:0000048!5.26e-18!430;CL:0000723!3.02e-17!436;CL:0000763!1.54e-16!112;CL:0000049!1.54e-16!112;CL:0002371!1.68e-16!591;CL:0000738!1.10e-15!140;CL:0002087!7.57e-14!119;CL:0002031!8.08e-14!124;CL:0000542!1.25e-10!53;CL:0000051!1.25e-10!53;CL:0000838!4.14e-10!52;CL:0000945!7.21e-08!24;CL:0000826!7.21e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.30e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.21e-28,168;CL:0000988,1.35e-27,177;CL:0002032,1.31e-26,161;CL:0000837,1.31e-26,161;CL:0000219,3.73e-21,386;CL:0000134,1.70e-18,354;CL:0000034,2.02e-17,441;CL:0002320,5.57e-17,361;CL:0000048,1.63e-16,427;CL:0000723,8.68e-16,433;CL:0000763,1.16e-15,108;CL:0000049,1.16e-15,108;CL:0000738,7.79e-15,136;CL:0002087,5.10e-13,115;CL:0002031,5.39e-13,120;CL:0000542,1.25e-10,53;CL:0000051,1.25e-10,53;CL:0000838,4.14e-10,52;CL:0000945,7.21e-08,24;CL:0000826,7.21e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.07e-27!51;DOID:0060083!2.07e-27!51;DOID:1240!1.84e-23!39;DOID:8692!8.66e-19!31;DOID:162!4.88e-16!235;DOID:14566!2.94e-15!239;DOID:0050686!2.36e-14!137;DOID:0060058!9.79e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.15e-18;39!DOID:8692;3.19e-18;31!DOID:2531;8.48e-17;51!DOID:0060083;8.48e-17;51!DOID:0060058;8.49e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.07e-27,51;DOID:0060083,2.07e-27,51;DOID:1240,1.84e-23,39;DOID:8692,8.66e-19,31;DOID:162,4.89e-16,235;DOID:14566,2.94e-15,239;DOID:0050686,2.40e-14,137;DOID:0060058,9.79e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002384!8.44e-18!375;UBERON:0002390!9.95e-08!102;UBERON:0003061!9.95e-08!102;UBERON:0002193!5.65e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-16,371;UBERON:0002390,4.79e-07,98;UBERON:0003061,4.79e-07,98 | |||
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| |||
|short_description=p2@GTF2A2 | |||
}} |
Latest revision as of 09:22, 18 September 2015
Short description: | p2@GTF2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GTF2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396061, ENST00000472508, ENST00000559141_5end |
EntrezGene: | GTF2A2 |
HGNC: | 4647 |
UniProt: | P52657 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.21e-28 | 168 |
hematopoietic cell | 1.35e-27 | 177 |
hematopoietic oligopotent progenitor cell | 1.31e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-26 | 161 |
motile cell | 3.73e-21 | 386 |
mesenchymal cell | 1.70e-18 | 354 |
stem cell | 2.02e-17 | 441 |
connective tissue cell | 5.57e-17 | 361 |
multi fate stem cell | 1.63e-16 | 427 |
somatic stem cell | 8.68e-16 | 433 |
myeloid cell | 1.16e-15 | 108 |
common myeloid progenitor | 1.16e-15 | 108 |
leukocyte | 7.79e-15 | 136 |
nongranular leukocyte | 5.10e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 5.39e-13 | 120 |
lymphocyte | 1.25e-10 | 53 |
common lymphoid progenitor | 1.25e-10 | 53 |
lymphoid lineage restricted progenitor cell | 4.14e-10 | 52 |
lymphocyte of B lineage | 7.21e-08 | 24 |
pro-B cell | 7.21e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.07e-16 | 371 |
hematopoietic system | 4.79e-07 | 98 |
blood island | 4.79e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.07e-27 | 51 |
immune system cancer | 2.07e-27 | 51 |
leukemia | 1.84e-23 | 39 |
myeloid leukemia | 8.66e-19 | 31 |
cancer | 4.89e-16 | 235 |
disease of cellular proliferation | 2.94e-15 | 239 |
organ system cancer | 2.40e-14 | 137 |
lymphoma | 9.79e-07 | 10 |