FFCP PHASE1:Hg19::chr17:79849438..79849493,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19071 | |||
|TSSclassifier=strong | |||
|UniProt=Q86V81,E9PB61 | |||
|association_with_transcript=0bp_to_ENST00000331204,ENST00000505490,NM_005782,uc002kbu.2_5end | |||
|cluster_id=chr17:79849438..79849493,- | |||
|coexpression_cluster_id=C2408 | |||
|description=CAGE_peak_1_at_ALYREF_5end | |||
|id=chr17:79849438..79849493,- | |||
|ontology_enrichment_celltype=CL:0000012!8.03e-42!682;CL:0000548!1.47e-40!679;CL:0000004!1.47e-40!679;CL:0000255!1.47e-40!679;CL:0000003!1.87e-28!722;CL:0000144!5.78e-27!625;CL:0002371!7.81e-20!591;CL:0000063!4.08e-17!578;CL:0002321!1.46e-16!248;CL:0000220!3.64e-16!246;CL:0000066!2.39e-15!254;CL:0000222!8.68e-09!119;CL:0000076!2.00e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.12e-16,250;CL:0000066,1.48e-15,253;CL:0000222,7.35e-09,121;CL:0000076,4.93e-07,63;CL:0000115,9.91e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.68e-22!235;DOID:14566!9.78e-22!239;DOID:2531!1.38e-17!51;DOID:0060083!1.38e-17!51;DOID:1240!2.18e-14!39;DOID:0050686!2.27e-13!137;DOID:8692!7.04e-12!31;DOID:0050687!2.40e-09!143;DOID:305!2.45e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.19e-11;39!DOID:8692;1.58e-11;31!DOID:2531;4.20e-11;51!DOID:0060083;4.20e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.68e-22,235;DOID:14566,9.78e-22,239;DOID:2531,1.38e-17,51;DOID:0060083,1.38e-17,51;DOID:1240,2.18e-14,39;DOID:0050686,2.27e-13,137;DOID:8692,7.04e-12,31;DOID:0050687,2.40e-09,143;DOID:305,2.45e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000487!1.72e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;1.30e-07;33!UBERON:0000487;1.75e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.72e-07,22;UBERON:0000490,8.16e-07,148 | |||
|phase1_expression=72.4896733289521,71.5095749795884,51.4483574950295,75.0549737648478,50.5066036702835,68.9147434039291,113.98494517574,112.446137469976,86.7136285623464,292.423384436796,668.493518917586,185.238283566386,163.271759523413,66.462531539545,71.5818331572298,94.1255205032485,107.279625988268,121.231475004304,112.712476520607,322.330930045031,302.941026497716,225.060490021267,164.013220626096,253.491435234982,222.084929443206,163.066207866128,185.711533335777,180.326399989639,180.947567350496,125.896042575886,133.76113054509,246.404888160352,293.374564890016,209.280769754402,260.367261150394,175.294663656991,244.569165965928,113.569058749035,97.665145917959,106.552337521483,44.7830948479849,47.288475238771,37.0908817393229,85.494164402384,90.6902264853143,83.206332987421,104.360637570652,98.6802931252382,120.1660719073,109.035416690095,95.2917828288254,113.038505886744,104.802686943932,89.076886334568,100.215600079813,96.9448048644414,99.6107447711137,89.2152233246986,107.741530114558,92.7484888249911,104.211951505244,87.4105945494798,102.923247332762,82.26137685281,131.17457586012,117.448741511066,122.073160803133,109.795666717197,85.523198620913,105.336589681982,127.739295055641,112.324678976207,108.546598892223,124.640618924046,139.043212177138,143.825830818746,131.873812965985,122.394167665828,101.25711961916,128.825760171044,105.823672269916,118.183707485718,66.8785728953026,74.2748511316499,61.3761385165853,73.8243285040057,62.4617739776179,68.3955403545835,66.1044872784862,71.5540315901523,74.5668989533377,93.3707131099793,92.8923944344306,155.962167723251,112.101712596307,230.987842347743,79.6674568961024,91.1784969578062,97.2495090267679,81.9213827414323,100.709980389779,96.5833523698856,79.8789586472436,101.606336679278,101.639038078819,99.9117864572131,76.3666895817344,129.756506882109,133.050712553755,145.691983478857,153.374259871146,128.962373152098,84.9682006918606,72.5035644123122,64.8120247590856,137.104304664055,129.528526837449,117.864213800542,85.2676362105725,57.0232091640133,66.4105122933547,80.7884237781118,57.670270606787,56.4420955190985,48.7229833554149,51.1438864415076,76.3649037136573,105.037113220086,109.383040075455,102.390853545139,80.4562658836074,124.750359904876,114.309130288116,142.768465191904,94.7528651101831,81.9831297318262,95.4343136461319,91.0007207465929,140.951412391625,145.011025940517,140.535657109002,92.7331854523806,254.278111228194,306.638734182723,101.258786820261,113.532588719122,99.58551242863,122.34569026864,129.842844747089,117.009112918813,249.248058837848,190.111845518453,218.698516012784,224.992560885756,175.350764335741,192.582629358047,293.010943084608,112.669706997827,85.0281367821237,85.0190356422262,171.605289088497,187.026938006754,172.795936744104,176.110615485671,162.838531524234,153.327633463765,148.638444678524,196.619644923881,300.500609433131,259.149525062099,254.467222319336,155.500892574555,135.723092451914,227.641095218403,70.0730451890399,131.948993154492,51.3747621555289,71.7091551872034,146.123373465723,137.926689635008,224.17289103238,158.607233632234,80.2924471331397,108.03795899989,155.94265557024,88.3927377446399,84.1216849740798,186.051216876035,111.128987351594,236.175334119402,127.629173191238,200.930427179482,215.129143065247,213.62567699412,72.678884966742,170.002695159487,55.7959218349133,67.7161628650771,84.3180228839879,197.505015540552,210.555115552158,182.308011412254,172.663557423311,98.0806968814008,129.937375780728,128.724874235588,79.7764092794029,196.804837782636,91.6681038370085,68.3383644219416,78.2028715278783,118.235891857255,97.2815876010863,74.4581160731868,86.5443381941893,102.61601000269,107.473016692802,102.48811234311,84.2256572577039,51.0801539547446,83.4272542414044,123.018311935949,172.443122379766,114.217164219508,110.734924959879,110.706573820155,171.007135993693,188.987449626438,179.519641733406,182.236134717021,196.81026368299,250.739445685095,153.32054168322,129.29142857677,294.227382480784,72.9057647010207,68.5785507586106,201.831400867974,198.08701084177,215.9458827756,209.779136137013,196.091499683166,207.374521103098,235.145801431327,194.259250474093,195.836302885713,190.444107293159,283.288383082961,202.082839563717,201.401934598192,53.237114625169,61.9181146506904,28.9487054273888,392.01923228021,107.122929971052,128.332722103297,107.00652827341,241.663769503882,181.555324175405,89.4404380231396,230.3464718544,248.544413681819,158.764476227801,110.945397561149,102.615198762108,144.655180656596,190.287045668987,134.319431477626,279.732356877583,254.970390142177,70.1718467349082,90.0916420786065,94.9753127024973,149.974134378843,71.728368740913,107.181973515244,106.753759061795,114.509771774501,304.789229936343,94.0986784381252,94.8281634322445,65.9303407419655,46.9831048139294,62.8687318463372,118.360074960603,131.022029966489,146.521809012559,210.419108607927,158.559993748525,112.928989749313,56.3078072282239,245.342812547649,188.334749735977,237.396031202415,89.4560273043822,200.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| |||
|short_description=p1@ALYREF | |||
}} |
Latest revision as of 09:19, 18 September 2015
Short description: | p1@ALYREF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALYREF_5end |
Coexpression cluster: | C2408_Alveolar_Renal_Mesenchymal_Mammary_chronic_Smooth_Trabecular |
Association with transcript: | 0bp_to_ENST00000331204, ENST00000505490, NM_005782, uc002kbu.2_5end |
EntrezGene: | ALYREF |
HGNC: | 19071 |
UniProt: | Q86V81E9PB61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.12e-16 | 250 |
epithelial cell | 1.48e-15 | 253 |
mesodermal cell | 7.35e-09 | 121 |
squamous epithelial cell | 4.93e-07 | 63 |
endothelial cell | 9.91e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.72e-07 | 22 |
unilaminar epithelium | 8.16e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.68e-22 | 235 |
disease of cellular proliferation | 9.78e-22 | 239 |
hematologic cancer | 1.38e-17 | 51 |
immune system cancer | 1.38e-17 | 51 |
leukemia | 2.18e-14 | 39 |
organ system cancer | 2.27e-13 | 137 |
myeloid leukemia | 7.04e-12 | 31 |
cell type cancer | 2.40e-09 | 143 |
carcinoma | 2.45e-08 | 106 |