FFCP PHASE1:Hg19::chr1:164529004..164529015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4U9 | |UniProt=F5H4U9 | ||
|association_with_transcript=-44bp_to_ENST00000367897,ENST00000401534,ENST00000498497,ENST00000540236,ENST00000559240_5end | |association_with_transcript=-44bp_to_ENST00000367897,ENST00000401534,ENST00000498497,ENST00000540236,ENST00000559240_5end | ||
|cluster_id=chr1:164529004..164529015,+ | |||
|coexpression_cluster_id=C2537 | |coexpression_cluster_id=C2537 | ||
|description=CAGE_peak_15_at_PBX1_5end | |description=CAGE_peak_15_at_PBX1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002367;5.47e-08;2 | |ontology_enrichment_celltype_v019=CL:0002367;5.47e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002367,7.65e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.28e-07;2 | |ontology_enrichment_development_v019=UBERON:0007297;1.28e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005904;1.45e-13;4!UBERON:0006947;1.33e-10;3!UBERON:0004054;1.33e-10;3!UBERON:0000160;1.79e-08;17!UBERON:0000922;2.16e-08;49!UBERON:0005969;5.47e-08;2!UBERON:0003956;5.47e-08;2!UBERON:0001905;1.28e-07;2!UBERON:0002757;1.28e-07;2!UBERON:0010134;1.28e-07;2!UBERON:0005408;1.28e-07;2!UBERON:0001899;1.28e-07;2!UBERON:0003135;2.33e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0005904;1.45e-13;4!UBERON:0006947;1.33e-10;3!UBERON:0004054;1.33e-10;3!UBERON:0000160;1.79e-08;17!UBERON:0000922;2.16e-08;49!UBERON:0005969;5.47e-08;2!UBERON:0003956;5.47e-08;2!UBERON:0001905;1.28e-07;2!UBERON:0002757;1.28e-07;2!UBERON:0010134;1.28e-07;2!UBERON:0005408;1.28e-07;2!UBERON:0001899;1.28e-07;2!UBERON:0003135;2.33e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,3.38e-14,4;UBERON:0006947,4.12e-11,3;UBERON:0004054,4.12e-11,3;UBERON:0000160,2.60e-08,17;UBERON:0005969,7.65e-08,2;UBERON:0003956,7.65e-08,2;UBERON:0003135,1.23e-07,11;UBERON:0001905,1.52e-07,2;UBERON:0002757,1.52e-07,2;UBERON:0010134,1.52e-07,2;UBERON:0005408,1.52e-07,2;UBERON:0001899,1.52e-07,2;UBERON:0003101,7.58e-07,22;UBERON:0000079,7.58e-07,22 | |||
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| ||
|short_description=p15@PBX1 | |short_description=p15@PBX1 | ||
}} | }} |
Latest revision as of 09:12, 18 September 2015
Short description: | p15@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PBX1_5end |
Coexpression cluster: | C2537_uterus_occipital_cervix_rectum_mesothelioma_Cardiac_parietal |
Association with transcript: | -44bp_to_ENST00000367897, ENST00000401534, ENST00000498497, ENST00000540236, ENST00000559240_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | F5H4U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 7.65e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 3.38e-14 | 4 |
male genital duct | 4.12e-11 | 3 |
internal male genitalia | 4.12e-11 | 3 |
intestine | 2.60e-08 | 17 |
reticulum trabeculare | 7.65e-08 | 2 |
aqueous drainage system | 7.65e-08 | 2 |
male reproductive organ | 1.23e-07 | 11 |
pineal body | 1.52e-07 | 2 |
regional part of epithalamus | 1.52e-07 | 2 |
secretory circumventricular organ | 1.52e-07 | 2 |
circumventricular organ | 1.52e-07 | 2 |
epithalamus | 1.52e-07 | 2 |
male organism | 7.58e-07 | 22 |
male reproductive system | 7.58e-07 | 22 |