FFCP PHASE1:Hg19::chr10:49813090..49813198,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:49813090..49813198,-
|short_description=p1@ARHGAP22
|description=CAGE_peak_1_at_ARHGAP22_5end
|association_with_transcript=0bp_to_ENST00000249601,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5H3 | |UniProt=Q7Z5H3 | ||
|association_with_transcript=0bp_to_ENST00000249601,ENST00000471013,NM_021226,uc001jgt.2,uc001jgu.2,uc010qgl.1_5end | |||
|cluster_id=chr10:49813090..49813198,- | |||
|coexpression_cluster_id=C2062 | |||
|description=CAGE_peak_1_at_ARHGAP22_5end | |||
|id=chr10:49813090..49813198,- | |||
|ontology_enrichment_celltype=CL:0000055!6.48e-30!180;CL:0000222!4.91e-23!119;CL:0000680!3.79e-20!57;CL:0000056!3.79e-20!57;CL:0000355!3.79e-20!57;CL:0000057!1.37e-19!75;CL:0000183!2.69e-19!59;CL:0000187!2.39e-18!54;CL:0000192!2.49e-18!42;CL:0000514!2.49e-18!42;CL:0000359!1.62e-17!32;CL:0002371!5.57e-15!591;CL:0000393!3.07e-14!60;CL:0000211!3.07e-14!60;CL:0000048!4.82e-12!430;CL:0000723!4.80e-11!436;CL:0000144!5.55e-11!625;CL:0000034!1.31e-09!444;CL:0002620!1.71e-09!23;CL:0000115!1.83e-09!35;CL:0000220!3.15e-08!246;CL:0002078!3.31e-08!44;CL:0002321!7.78e-08!248;CL:0002139!1.11e-07!24;CL:0002539!1.24e-07!10;CL:0000071!5.57e-07!18;CL:0002546!5.57e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.25e-17;32!CL:0000192;1.18e-13;43!CL:0000187;2.14e-10;55!CL:0002620;9.52e-10;23!CL:0000115;4.51e-09;36!CL:0000057;4.69e-09;73!CL:0002539;7.48e-08;10!CL:0002139;7.89e-08;24!CL:0000071;4.02e-07;18!CL:0000134;4.35e-07;55!CL:0000393;5.17e-07;61!CL:0000211;5.17e-07;61!CL:0002320;8.73e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.77e-24,121;CL:0000680,1.04e-20,58;CL:0000056,1.04e-20,58;CL:0000355,1.04e-20,58;CL:0000057,1.61e-20,76;CL:0000187,7.41e-19,55;CL:0000192,1.14e-18,43;CL:0000514,1.14e-18,43;CL:0000359,4.60e-18,32;CL:0000048,1.68e-14,427;CL:0000393,3.28e-14,61;CL:0000211,3.28e-14,61;CL:0000723,1.58e-13,433;CL:0000034,1.11e-11,441;CL:0000115,3.57e-10,36;CL:0002620,9.14e-10,23;CL:0002078,4.79e-09,45;CL:0002321,2.84e-08,250;CL:0002139,6.81e-08,24;CL:0002539,7.68e-08,10;CL:0000071,3.62e-07,18;CL:0002546,3.62e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;1.18e-13;43!CL:0000355;7.89e-11;58!CL:0002546;4.02e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.41e-26!83;UBERON:0002329!2.41e-26!83;UBERON:0003077!2.41e-26!83;UBERON:0003059!2.41e-26!83;UBERON:0007282!2.41e-26!83;UBERON:0009618!2.41e-26!83;UBERON:0007285!2.41e-26!83;UBERON:0000055!3.97e-25!69;UBERON:0002049!5.52e-25!79;UBERON:0007798!5.52e-25!79;UBERON:0001981!4.46e-24!60;UBERON:0007500!4.46e-24!60;UBERON:0004537!4.46e-24!60;UBERON:0006965!4.46e-24!60;UBERON:0004290!2.80e-23!70;UBERON:0001637!1.20e-22!42;UBERON:0003509!1.20e-22!42;UBERON:0004572!1.20e-22!42;UBERON:0000486!1.83e-22!82;UBERON:0000467!4.73e-21!625;UBERON:0000480!6.52e-21!626;UBERON:0004872!5.10e-20!84;UBERON:0004535!1.53e-19!110;UBERON:0000468!4.80e-19!659;UBERON:0001009!5.44e-19!113;UBERON:0000119!8.08e-19!312;UBERON:0001134!1.35e-18!61;UBERON:0002036!1.35e-18!61;UBERON:0003082!1.35e-18!61;UBERON:0000483!5.16e-18!309;UBERON:0004573!5.86e-18!33;UBERON:0004571!5.86e-18!33;UBERON:0002385!8.58e-18!63;UBERON:0001015!8.58e-18!63;UBERON:0000383!8.58e-18!63;UBERON:0004111!2.26e-17!241;UBERON:0002204!1.05e-16!167;UBERON:0000025!3.31e-16!194;UBERON:0005256!1.16e-15!143;UBERON:0003914!1.50e-15!118;UBERON:0000923!2.30e-14!604;UBERON:0005291!2.30e-14!604;UBERON:0006598!2.30e-14!604;UBERON:0002532!2.30e-14!604;UBERON:0000477!2.34e-14!286;UBERON:0002050!3.02e-14!605;UBERON:0005423!3.02e-14!605;UBERON:0003081!1.38e-13!216;UBERON:0000922!4.30e-13!612;UBERON:0000475!8.14e-13!365;UBERON:0000490!2.12e-11!138;UBERON:0000947!2.20e-11!21;UBERON:0010191!2.20e-11!21;UBERON:0000479!3.43e-11!787;UBERON:0000926!7.06e-10!448;UBERON:0004120!7.06e-10!448;UBERON:0006603!7.06e-10!448;UBERON:0004237!1.24e-07!10;UBERON:0004695!1.24e-07!10;UBERON:0002111!1.24e-07!10;UBERON:0004178!1.24e-07!10;UBERON:0003102!1.60e-07!95;UBERON:0002199!2.77e-07!45;UBERON:0002416!2.77e-07!45;UBERON:0001986!5.57e-07!18;UBERON:0004638!5.57e-07!18;UBERON:0004852!5.57e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.64e-17;33!UBERON:0004571;5.64e-17;33!UBERON:0001637;9.24e-17;42!UBERON:0003509;9.24e-17;42!UBERON:0004572;9.24e-17;42!UBERON:0007500;7.25e-14;56!UBERON:0001981;7.25e-14;56!UBERON:0004537;7.25e-14;56!UBERON:0000055;5.62e-12;65!UBERON:0000947;9.52e-12;21!UBERON:0010191;9.52e-12;21!UBERON:0003914;1.03e-10;74!UBERON:0002049;1.21e-10;75!UBERON:0007798;1.21e-10;75!UBERON:0002385;7.13e-08;31!UBERON:0001015;7.13e-08;31!UBERON:0000383;7.13e-08;31!UBERON:0004237;7.48e-08;10!UBERON:0004695;7.48e-08;10!UBERON:0002111;7.48e-08;10!UBERON:0004178;7.48e-08;10!UBERON:0004638;4.02e-07;18!UBERON:0001986;4.02e-07;18!UBERON:0004852;4.02e-07;18 | |||
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|phase1_expression=3.45188920614058,7.06531728840244,2.39622486963151,6.00439790118782,3.12872766099101,4.36169262050184,5.06599756336621,59.3816681021221,3.3954131665979,22.3617882216373,10.4670175195864,0,1.05506791291381,8.78741106016331,7.95353701746998,59.1646128877562,56.6532856342538,67.1885283156383,57.0881374584893,7.63350560076085,21.6240732718908,1.25381888591235,2.0036519099174,4.51685602740518,2.25976751270645,0.305653622991805,0.164201178899891,0.0787107813136792,3.54027849164014,0.383829398097213,0.309632246632152,3.67768489791571,8.73497164456925,2.9580320813343,0,0,0,0,1.20326668482085,0.217010870715852,23.5111247951921,23.9681312854045,28.8484635750289,40.8569050970577,49.8796245669228,69.3790414997154,19.5240391000775,41.9391245782262,22.6085650753426,3.45230870786581,12.0395532068677,7.56743135643473,7.23965929546899,13.5551783552603,9.47985406160392,28.0481085918481,50.2147316106436,43.3716324979013,14.3859429414324,42.3626315740444,17.2621023965741,11.5447955065351,22.9383206264877,17.4752147718405,3.48251086354301,9.07816359505824,6.85104473895132,5.02497330513487,10.9511412868242,10.8594422352558,4.84319602106695,12.8897172595648,7.59509729858123,2.74631872205524,0.850417199860174,0.209658645508376,5.50410292617826,2.55300717830561,1.28580469357664,0,0.39783335439818,0,5.27988733383968,9.83049500271837,8.00558328477199,2.56038133539904,7.20712776664822,12.0698012390441,14.542987201267,11.4486450544244,2.84606484554724,1.17447437874188,1.91136614062614,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.947109008176067,0,0,0,0,0,2.68280343881454,3.06870148424473,14.0961269429981,15.0401373190767,11.8774145547875,66.0087336052412,37.9575198836056,2.26883561193763,3.54767035940102,1.84453049955565,4.06035134042909,0,0.370784442784429,2.59637914923747,1.91542711029194,2.39324328933957,0,0,0,50.8831762858765,40.4310259699879,42.0040006945189,42.3980956443007,36.4964509502618,33.5644011166882,49.7408020357609,35.4030960061981,30.9516648537438,23.7651635062916,14.9046847330384,8.36299316290364,3.90499292077071,31.2513618293988,29.9752520716251,22.5035315275881,14.594409220701,23.761022381981,42.9286584904473,31.3257667657483,36.0907435542902,0,0,6.10531672999548,10.933382937297,43.1810044776217,37.7366165317674,38.1492705595922,25.8907919004801,10.6528744027038,23.4847790605351,37.9868024562426,7.46906484959439,17.7818087131988,24.6827473701323,12.7140239221742,8.06646294271999,6.32667865951251,78.6643393612408,88.4231323393896,74.8737889564523,45.447150975137,57.1411493619504,55.8994210674949,52.8759303550174,32.4282597703067,21.1817851410319,16.6320400019487,18.0504858373347,48.2385521827154,42.3984703671581,48.9858091606333,33.0312892461985,72.5907982568559,25.0217243902078,26.9709260303137,15.0238058906597,19.2834711372036,30.8550173384843,18.5794928272154,23.3125091275518,32.4098383771154,34.3164922364002,15.973713482829,18.9839193458222,33.0801611192882,19.1950900167561,22.9714734562144,15.6484827691909,17.2961280796129,35.8559688441781,33.1474403168937,24.7558464773312,23.1913023795956,19.9104668031309,18.0686895095072,0,0.132529768321485,0.116193942869518,0.414644220061482,0,0,57.8863269620319,12.8648187638577,58.0166669680418,8.35862270457562,12.271951188383,0,0,0,0,0,0,0,0,0,7.38155454624648,46.2797853551371,17.2861084759188,22.0513067078313,0,0.982827216677626,0.590789906681404,0,0,3.60292401626904,8.9995234035073,0,0,1.11106134190236,4.88712457965487,33.2779131289465,12.9898207822746,0.231860809950154,3.05262605013136,7.79578817909799,7.87075371380238,6.08813287150714,0,0,27.8225216878759,14.742268703772,22.7405678301754,24.370796836562,29.7328366911981,20.9827143918732,16.7474437454326,16.8567684338098,24.9198741457387,0,0,0.207328115540772,0.144119953416961,0,0.317489471460845,0,0,1.71072446022705,2.46785982487976,0,0,55.953411088335,6.5394010324992,44.2963246358538,21.9761916788222,10.7296933755565,54.94467891614,13.8287820624133,16.6411899058186,27.5211890460492,41.1362482867507,60.4778346366546,2.43062589218851,5.42621605391443,23.0507294298615,53.7464704084663,1.42156779497018,23.7585561880029,4.82303003295338,5.22920075160176,0.399891964728228,27.9734695474738,20.5925407487172,16.8667151586425,20.1284878612929,3.44585807502342,126.946845486239,83.8283765605284,50.9581279924951,94.1860666641851,0,0,0,0,2.03275699377971,1.30139853857622,0,0.670065061337395,0,0,0,0,1.96306386750624,8.50289885801451,25.2276472040754,4.57535895367776,13.0253161821928,3.46945313074656,24.1311314884989,39.1229929646035,38.6592756895174,7.24311499047534,38.5250847150553,51.6233671916769,24.5880628944674,19.7759169037368,16.1277409191102,1.03384013061444,0.431428401637234,0.213455115606889,0,3.32870879020994,2.72151263996712,4.46594054073798,7.05925077125087,4.49056151092918,3.07533958213682,5.62877973973374,10.7772127166217,2.96836132889982,69.394362211195,77.0617887858971,84.344589226182,58.6757504977492,75.6529563774335,0,17.0430499757792,1.10497186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| ||
|short_description=p1@ARHGAP22 | |||
}} | }} |
Latest revision as of 09:12, 18 September 2015
Short description: | p1@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP22_5end |
Coexpression cluster: | C2062_Myoblast_mesenchymal_Smooth_leiomyoma_Preadipocyte_Aortic_Fibroblast |
Association with transcript: | 0bp_to_ENST00000249601, ENST00000471013, NM_021226, uc001jgt.2, uc001jgu.2, uc010qgl.1_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | Q7Z5H3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.77e-24 | 121 |
muscle precursor cell | 1.04e-20 | 58 |
myoblast | 1.04e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-20 | 58 |
fibroblast | 1.61e-20 | 76 |
muscle cell | 7.41e-19 | 55 |
smooth muscle cell | 1.14e-18 | 43 |
smooth muscle myoblast | 1.14e-18 | 43 |
vascular associated smooth muscle cell | 4.60e-18 | 32 |
multi fate stem cell | 1.68e-14 | 427 |
electrically responsive cell | 3.28e-14 | 61 |
electrically active cell | 3.28e-14 | 61 |
somatic stem cell | 1.58e-13 | 433 |
stem cell | 1.11e-11 | 441 |
endothelial cell | 3.57e-10 | 36 |
skin fibroblast | 9.14e-10 | 23 |
meso-epithelial cell | 4.79e-09 | 45 |
embryonic cell | 2.84e-08 | 250 |
endothelial cell of vascular tree | 6.81e-08 | 24 |
aortic smooth muscle cell | 7.68e-08 | 10 |
blood vessel endothelial cell | 3.62e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.62e-07 | 18 |