FFCP PHASE1:Hg19::chr10:49482865..49482890,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=143162 | |EntrezGene=143162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28572 | |HGNC=28572 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DX3 | |UniProt=Q68DX3 | ||
|association_with_transcript=22bp_to_ENST00000374201_5end | |association_with_transcript=22bp_to_ENST00000374201_5end | ||
|cluster_id=chr10:49482865..49482890,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_FRMPD2_5end | |description=CAGE_peak_4_at_FRMPD2_5end | ||
|id=chr10:49482865..49482890,- | |id=chr10:49482865..49482890,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.85e-34;1!UBERON:0003056;2.31e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.50e-58!57;UBERON:0005068!1.50e-58!57;UBERON:0006241!1.50e-58!57;UBERON:0007135!1.50e-58!57;UBERON:0002616!3.14e-52!59;UBERON:0000955!1.99e-50!69;UBERON:0006238!1.99e-50!69;UBERON:0003075!2.60e-49!86;UBERON:0007284!2.60e-49!86;UBERON:0005743!8.72e-49!86;UBERON:0001017!6.12e-48!82;UBERON:0002346!8.02e-47!90;UBERON:0000073!1.41e-43!94;UBERON:0001016!1.41e-43!94;UBERON:0002780!9.71e-42!41;UBERON:0001890!9.71e-42!41;UBERON:0006240!9.71e-42!41;UBERON:0003080!1.19e-40!42;UBERON:0007023!6.46e-38!115;UBERON:0003056!8.33e-33!61;UBERON:0002308!3.64e-31!9;UBERON:0000125!3.64e-31!9;UBERON:0000153!2.22e-30!129;UBERON:0007811!2.22e-30!129;UBERON:0000033!5.66e-30!123;UBERON:0002020!9.13e-29!34;UBERON:0003528!9.13e-29!34;UBERON:0001893!1.58e-28!34;UBERON:0002298!1.95e-27!8;UBERON:0002791!8.32e-26!33;UBERON:0002420!2.06e-23!9;UBERON:0007245!2.06e-23!9;UBERON:0010009!2.06e-23!9;UBERON:0010011!2.06e-23!9;UBERON:0000454!2.06e-23!9;UBERON:0004121!5.31e-23!169;UBERON:0001869!7.16e-23!32;UBERON:0009663!1.42e-22!7;UBERON:0000924!2.62e-22!173;UBERON:0006601!2.62e-22!173;UBERON:0003076!1.69e-18!15;UBERON:0003057!1.69e-18!15;UBERON:0004733!5.06e-18!12;UBERON:0002028!5.06e-18!12;UBERON:0007277!5.06e-18!12;UBERON:0000369!8.29e-18!4;UBERON:0002435!8.29e-18!4;UBERON:0000204!8.29e-18!4;UBERON:0010082!8.29e-18!4;UBERON:0000025!8.70e-18!194;UBERON:0004732!1.46e-16!13;UBERON:0001894!2.24e-16!7;UBERON:0006222!2.24e-16!7;UBERON:0006331!9.06e-15!3;UBERON:0000988!1.37e-14!3;UBERON:0001896!1.89e-14!3;UBERON:0005290!1.89e-14!3;UBERON:0010096!1.89e-14!3;UBERON:0005383!4.67e-14!3;UBERON:0005382!4.67e-14!3;UBERON:0000483!5.09e-13!309;UBERON:0004111!6.48e-13!241;UBERON:0000119!8.10e-13!312;UBERON:0000477!1.55e-12!286;UBERON:0001950!4.87e-12!20;UBERON:0003296!2.10e-11!4;UBERON:0010133!2.10e-11!4;UBERON:0001905!6.22e-11!2;UBERON:0002757!6.22e-11!2;UBERON:0010134!6.22e-11!2;UBERON:0002784!6.22e-11!2;UBERON:0005408!6.22e-11!2;UBERON:0001899!6.22e-11!2;UBERON:0002619!6.92e-11!22;UBERON:0002148!1.53e-10!2;UBERON:0009662!1.53e-10!2;UBERON:0001873!4.42e-10!2;UBERON:0010122!4.42e-10!2;UBERON:0000956!1.72e-09!25;UBERON:0000203!1.72e-09!25;UBERON:0000064!1.07e-08!219;UBERON:0002680!1.95e-08!9;UBERON:0001895!1.95e-08!9;UBERON:0010092!1.95e-08!9;UBERON:0002021!2.26e-08!5;UBERON:0001872!2.64e-08!5;UBERON:0000475!1.60e-07!365;UBERON:0000481!9.27e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0003296;4.28e-34;4!UBERON:0010133;4.28e-34;4!UBERON:0002784;4.28e-34;4!UBERON:0002079;9.85e-34;1!UBERON:0001894;5.35e-20;7!UBERON:0002081;1.27e-17;2!UBERON:0004151;3.24e-12;3!UBERON:0000966;6.13e-08;5!UBERON:0005388;6.13e-08;5!UBERON:0001802;6.13e-08;5!UBERON:0000970;1.33e-07;20!UBERON:0002104;2.77e-07;21!UBERON:0000020;9.95e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0003296,4.28e-34,4;UBERON:0010133,4.28e-34,4;UBERON:0002784,4.28e-34,4;UBERON:0002079,9.85e-34,1;UBERON:0001894,5.35e-20,7;UBERON:0006222,5.35e-20,7;UBERON:0002081,1.27e-17,2;UBERON:0010227,1.27e-17,2;UBERON:0004151,3.24e-12,3;UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61569185248852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0.18628920882415,2.90532133366085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,6.96412386641773,13.1150651665341,0,0.227662191351298,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,4.36006919477604,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61569185248852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0.18628920882415,2.90532133366085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,6.96412386641773,13.1150651665341,0,0.227662191351298,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,4.36006919477604,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@FRMPD2 | |short_description=p4@FRMPD2 | ||
}} | }} |
Latest revision as of 08:49, 18 September 2015
Short description: | p4@FRMPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FRMPD2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 22bp_to_ENST00000374201_5end |
EntrezGene: | FRMPD2 |
HGNC: | 28572 |
UniProt: | Q68DX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
left cardiac atrium | 9.85e-34 | 1 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
cardiac atrium | 1.27e-17 | 2 |
future cardiac atrium | 1.27e-17 | 2 |
cardiac chamber | 3.24e-12 | 3 |
eye | 2.77e-07 | 21 |
visual system | 2.77e-07 | 21 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |