FFCP PHASE1:Hg19::chr1:46713405..46713452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8438 | |EntrezGene=8438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9826 | |HGNC=9826 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1N0 | |UniProt=G3V1N0 | ||
|association_with_transcript=0bp_to_ENST00000469835,ENST00000535499_5end | |association_with_transcript=0bp_to_ENST00000469835,ENST00000535499_5end | ||
|cluster_id=chr1:46713405..46713452,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_RAD54L_5end | |description=CAGE_peak_1_at_RAD54L_5end | ||
|id=chr1:46713405..46713452,+ | |id=chr1:46713405..46713452,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.25e-17!254;CL:0000548!7.58e-12!679;CL:0000004!7.58e-12!679;CL:0000255!7.58e-12!679;CL:0000012!1.15e-11!682;CL:0000333!2.20e-07!41;CL:0002321!7.30e-07!248 | |ontology_enrichment_celltype=CL:0000066!5.25e-17!254;CL:0000548!7.58e-12!679;CL:0000004!7.58e-12!679;CL:0000255!7.58e-12!679;CL:0000012!1.15e-11!682;CL:0000333!2.20e-07!41;CL:0002321!7.30e-07!248 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.25e-17,253;CL:0000333,1.28e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.18e-54!235;DOID:14566!4.12e-53!239;DOID:0050686!4.18e-30!137;DOID:0050687!1.79e-26!143;DOID:2531!4.29e-25!51;DOID:0060083!4.29e-25!51;DOID:1240!4.79e-21!39;DOID:305!5.27e-21!106;DOID:8692!4.53e-17!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.16e-17;39!DOID:8692;6.23e-17;31!DOID:2531;9.56e-16;51!DOID:0060083;9.56e-16;51!DOID:0050687;9.44e-08;143!DOID:0050686;2.13e-07;137!DOID:14566;2.39e-07;239!DOID:305;2.95e-07;106!DOID:162;5.16e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.93e-55,235;DOID:14566,1.98e-53,239;DOID:0050686,4.12e-30,137;DOID:0050687,1.22e-26,143;DOID:2531,1.08e-25,51;DOID:0060083,1.08e-25,51;DOID:1240,1.53e-21,39;DOID:305,3.67e-21,106;DOID:8692,1.83e-17,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.140954404095971,0,0,0,0,0.631719873426831,0,25.0648615231539,27.9120467188971,20.315047608106,8.96807725976742,0.495065411840187,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,28.8103275899684,17.3400587557615,8.14982275843028,20.036519099174,25.0480197883378,22.4721324874697,40.4991050464142,45.0732236080202,45.652253161934,0,0,0.464448369948228,7.35536979583142,12.6506485886865,1.10926203050036,55.3115812143354,32.9832619370818,14.6800219667424,0,0.200544447470142,0,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0,0.382273228125229,0,0.560508562981536,22.3876472058815,0.393419540227666,0.393010762749165,0,3.34372990781356,0,0,1.94826728407911,7.13026924065111,0.589211814949674,0.443067789167242,0,11.0158534964081,8.32379824383221,17.5948557925933,15.4756009960075,7.82468331484642,0,0,0,19.7158256293765,0,0.68725489096526,0.506039384039006,0.318565414324097,0.651083453856419,1.90090408889675,0.150575119077773,0.639933055772092,0,0,0,0.80642697289893,0,0.144824403882799,0,6.70700859703636,2.9408389224012,11.9274920286907,0.50133791063589,2.02785126545153,7.95285947051099,0.973269740605272,13.1403395858054,5.98669373148923,6.67544371267758,15.062593682237,16.3932879731644,18.168437696437,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,4.77029777680092,6.02164216574287,12.4970580578734,1.13061588384802,5.03399323451887,8.25354125820202,9.40477349415648,2.58416759169329,3.20189636418039,3.3472061276467,5.63961043952806,3.04108842287405,4.63717909341522,15.4418493745265,2.43042584364528,13.5735586991801,16.6151735743366,25.3375831087475,10.7321646226118,9.49265659568129,5.1296488300514,0,0,8.28578699070815,0.993943903390637,5.69837302490609,0.397227542439656,9.17877186396204,10.2853830837524,10.6528744027038,8.5399196583764,2.4666754841716,6.22422070799533,2.55950276932407,11.769257024169,5.75158225050739,1.72852777344,16.8711430920334,3.43376084513353,11.409436430889,1.64393548606981,33.3513976148292,24.2809416552197,28.7924153739609,4.08308342509786,17.6881416928946,0.723280468230358,1.18800285728205,2.47266929278557,24.5743567723267,4.31170885089743,26.2604337768343,34.5327114846621,16.623846929051,10.0964852802593,7.66219489497549,3.90618953157152,7.48652408856139,30.6756277027954,1.06778694409284,3.60284231971255,23.4071054945834,5.5648365788757,3.09168648054755,1.67505170698431,25.4852261684312,5.74878330451072,13.6314238091822,1.93304787148829,1.45481451136931,13.1353549231147,7.7579115635283,8.30846902321389,1.35282597214308,4.36393792945335,3.72845974005705,38.5436911369521,39.0962816548382,28.467516003032,26.3299079739041,35.324919122588,44.8922151663271,6.25798129319264,1.92972281457866,12.4321429217232,0,0,15.3798840051797,15.5097914871854,16.8707720918437,14.3382164552112,13.2906460896368,17.7952964333322,17.1235761363409,20.7994753032867,21.1610936320515,8.85786545549578,12.6217596423101,3.2925920906512,1.47008711385542,0,0,0.590789906681404,101.53651286537,13.2827513626563,6.34800898104545,1.64625428112938,2.24803506515239,13.8729981928051,6.01824893530442,3.58389135841357,16.6389565644733,15.8764476227801,8.34698915820553,1.40890433082986,4.47535988059329,5.09284063834272,4.94660795809955,17.3844967551041,17.1697232418975,1.72351904261178,3.7440682422278,6.68840230299277,0,0.839910640994298,5.95455408418023,13.3442198827244,14.5316969256981,15.3353071666084,7.38994856843915,8.36460123125647,0.621984346622316,0.288239906833923,0.12624243342638,33.7173818691418,18.7174328523556,10.5495702489042,6.84289784090821,30.8482478109971,15.0171528921959,4.57322292208925,30.8360481949742,16.1305225468314,23.9816194634507,0,0,12.67954128834,0.531876233169741,2.08014873822732,32.4081291570299,22.6958611237245,20.7809299632558,1.85871391755592,0,16.4648067356154,12.0522388188682,2.84313558994037,15.8390374586686,0,0,1.3996218765488,1.2162378064119,1.00451418286425,0,1.4377491329495,0,31.380119108958,3.61953266668948,4.10952645100767,10.0274139414342,31.1596700302006,0.394061520403854,0.646882724578552,0.77005821767849,10.1637849688985,5.20559415430487,4.63973287666617,5.69555302136786,9.56908127479745,0,0,0,0.12269149171914,1.00034104211935,1.08506009479894,0.623912584592421,1.24900292158013,1.73472656537328,4.80279801470124,0,0,2.0694614258501,9.29915837949611,7.55913591020983,4.60483156680839,2.54541504701563,1.37257369524342,0.82707210449155,0.215714200818617,0.213455115606889,8.18444442904901,16.6435439510497,13.0027826131763,0.248107807818777,4.45039722535381,0.561320188866147,0.128139149255701,2.04682899626681,0.482561763430822,0,11.4115173413965,4.97172830876756,11.5799289979471,8.82732529612156,8.25093687065711,14.2614150518114,0,0.184161977871793,7.23331023437022,10.7433789123963,0.393373244878272,19.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| ||
|short_description=p1@RAD54L | |short_description=p1@RAD54L | ||
}} | }} |
Latest revision as of 08:47, 18 September 2015
Short description: | p1@RAD54L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAD54L_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000469835, ENST00000535499_5end |
EntrezGene: | RAD54L |
HGNC: | 9826 |
UniProt: | G3V1N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.25e-17 | 253 |
migratory neural crest cell | 1.28e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.93e-55 | 235 |
disease of cellular proliferation | 1.98e-53 | 239 |
organ system cancer | 4.12e-30 | 137 |
cell type cancer | 1.22e-26 | 143 |
hematologic cancer | 1.08e-25 | 51 |
immune system cancer | 1.08e-25 | 51 |
leukemia | 1.53e-21 | 39 |
carcinoma | 3.67e-21 | 106 |
myeloid leukemia | 1.83e-17 | 31 |