FFCP PHASE1:Hg19::chr7:33945169..33945180,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:33945169..33945180,+ to FFCP PHASE1:Hg19::chr7:33945169..33945180,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=168667 | |EntrezGene=168667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |HGNC=24154 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDG9 | |UniProt=F8WDG9 | ||
|association_with_transcript=18bp_to_ENST00000444773_5end | |||
|cluster_id=chr7:33945169..33945180,+ | |||
|coexpression_cluster_id=C4684 | |||
|description=CAGE_peak_4_at_BMPER_5end | |||
|id=chr7:33945169..33945180,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.31e-22!180;CL:0000057!4.37e-19!75;CL:0000359!8.05e-15!32;CL:0002620!8.21e-15!23;CL:0000192!7.30e-14!42;CL:0000514!7.30e-14!42;CL:0000187!5.45e-11!54;CL:0000680!9.15e-11!57;CL:0000056!9.15e-11!57;CL:0000355!9.15e-11!57;CL:0000393!3.90e-10!60;CL:0000211!3.90e-10!60;CL:0000183!3.80e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.68e-16;32!CL:0002595;3.26e-13;5!CL:0002620;2.43e-11;23!CL:0000192;1.06e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.46e-17,32;CL:0000192,1.47e-13,43;CL:0000514,1.47e-13,43;CL:0002595,3.64e-13,5;CL:0002620,2.10e-11,23;CL:0000680,4.25e-10,58;CL:0000056,4.25e-10,58;CL:0000355,4.25e-10,58;CL:0000187,1.18e-09,55;CL:0000057,1.21e-09,76;CL:0000393,2.69e-08,61;CL:0000211,2.69e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.06e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.14e-09;5!DOID:450;7.14e-09;5!DOID:66;7.14e-09;5!DOID:423;7.14e-09;5!DOID:0080000;7.14e-09;5!DOID:11722;7.14e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.84e-09,5;DOID:450,7.84e-09,5;DOID:66,7.84e-09,5;DOID:423,7.84e-09,5;DOID:0080000,7.84e-09,5;DOID:11722,7.84e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.43e-13!365;UBERON:0000914!1.34e-12!83;UBERON:0002329!1.34e-12!83;UBERON:0003077!1.34e-12!83;UBERON:0003059!1.34e-12!83;UBERON:0007282!1.34e-12!83;UBERON:0009618!1.34e-12!83;UBERON:0007285!1.34e-12!83;UBERON:0001637!2.37e-11!42;UBERON:0003509!2.37e-11!42;UBERON:0004572!2.37e-11!42;UBERON:0002199!2.56e-11!45;UBERON:0002416!2.56e-11!45;UBERON:0004290!5.28e-11!70;UBERON:0002385!3.73e-10!63;UBERON:0001015!3.73e-10!63;UBERON:0000383!3.73e-10!63;UBERON:0001134!4.09e-10!61;UBERON:0002036!4.09e-10!61;UBERON:0003082!4.09e-10!61;UBERON:0002097!1.25e-09!40;UBERON:0000486!1.34e-09!82;UBERON:0004573!1.59e-09!33;UBERON:0004571!1.59e-09!33;UBERON:0001981!4.73e-09!60;UBERON:0007500!4.73e-09!60;UBERON:0004537!4.73e-09!60;UBERON:0006965!4.73e-09!60;UBERON:0004872!5.41e-09!84;UBERON:0000025!6.18e-09!194;UBERON:0000468!1.23e-08!659;UBERON:0000055!2.51e-07!69;UBERON:0000467!3.19e-07!625;UBERON:0000480!3.92e-07!626;UBERON:0003102!5.27e-07!95;UBERON:0001950!7.34e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.83e-16;33!UBERON:0004571;4.83e-16;33!UBERON:0003834;3.26e-13;5!UBERON:0001533;3.26e-13;5!UBERON:0001637;3.83e-12;42!UBERON:0003509;3.83e-12;42!UBERON:0004572;3.83e-12;42!UBERON:0003513;2.57e-09;7!UBERON:0007500;2.53e-08;56!UBERON:0001981;2.53e-08;56!UBERON:0004537;2.53e-08;56!UBERON:0002199;3.78e-07;46!UBERON:0002416;3.78e-07;46!UBERON:0000947;9.34e-07;21!UBERON:0010191;9.34e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.94e-19,33;UBERON:0004571,2.94e-19,33;UBERON:0001637,3.85e-16,42;UBERON:0003509,3.85e-16,42;UBERON:0004572,3.85e-16,42;UBERON:0003834,3.64e-13,5;UBERON:0001533,3.64e-13,5;UBERON:0007500,1.92e-11,59;UBERON:0001981,1.92e-11,59;UBERON:0004537,1.92e-11,59;UBERON:0006965,1.92e-11,59;UBERON:0004872,8.89e-11,83;UBERON:0000055,1.56e-10,68;UBERON:0003513,2.76e-09,7;UBERON:0001134,3.69e-09,62;UBERON:0002036,3.69e-09,62;UBERON:0003082,3.69e-09,62;UBERON:0002199,8.09e-09,46;UBERON:0002416,8.09e-09,46;UBERON:0002385,9.78e-09,64;UBERON:0001015,9.78e-09,64;UBERON:0000383,9.78e-09,64;UBERON:0000025,1.53e-08,192;UBERON:0002049,1.54e-08,78;UBERON:0007798,1.54e-08,78;UBERON:0004535,1.04e-07,109;UBERON:0002097,1.08e-07,41;UBERON:0002329,1.88e-07,71;UBERON:0003059,1.88e-07,71;UBERON:0007282,1.88e-07,71;UBERON:0004290,1.88e-07,71;UBERON:0009618,1.88e-07,71;UBERON:0001009,2.38e-07,112;UBERON:0003077,2.73e-07,72;UBERON:0007285,2.73e-07,72;UBERON:0007524,3.91e-07,73;UBERON:0000947,6.23e-07,21;UBERON:0010191,6.23e-07,21 | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.140954404095971,1.0007329835313,0.446961094427288,0,0,1.26343974685366,1.04474251279935,0.245733936501509,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,5.42158728576849,3.50936537445123,1.59331170856906,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,1.64619665163954,4.76673050927588,1.72101972449288,0.709336764396714,0,0,0.24666754841716,2.48968828319813,1.0776853765575,4.25000948094993,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.421352420106746,0,0,0.206651562351531,0,0,0,2.87447256726495,0.168336113954066,0,0.277064115484183,0.877955241761676,0.612975591598039,0.600952235626387,0.794025282120147,1.25572744982203,2.77624605464138,3.60284231971255,0.600182192168805,2.47326070172253,1.03056216018252,1.67505170698431,3.20675031258406,0.584622030967192,1.7670364197088,5.79914361446486,1.61646056818812,0.710019185033229,1.41052937518696,0.508681776931463,0,0.272746120590835,0,0,0,1.51052125730374,0,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0.845302752556,0,0,0,0,0,0.285955987316295,0.542621605391443,2.46972101034231,0,0.710783897485092,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,1.15825045334063,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0,0,0,0.248107807818777,1.53461973288062,0.280660094433074,0.256278298511402,1.53512174720011,0.482561763430822,0,0.462629081407967,0.710246901252508,0.574890092096664,0,0.348631135379878,0,0,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,2.51849877464512,0,5.85263802334569,5.85536633348724,1.73986598415015,0.18532421910392,2.28999818787186,0,0,0.953150969619124,0,0,2.86382923133343,0.78494864019923,0.539617372749944,0,0.235624804691373,10.5134890418124,1.58510321173008,0,0.48763373908959,4.38684281336312,1.05650146756755,0,0.282810863907425,3.39024349860728,2.2054613741845,1.99031692572366,2.19225442626881,1.15755106853338,0,0.811641507850816,0.92947049429925,0.281695602532241,0.860468113224309,1.67023369722306,0.7133421029625,0,0.844430541190656,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0.828851746593443,0,0.409074730008619,0,2.17727711363265,0,0,0,0,0,0,1.93866549219044,0.463840490809256,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0,3.05163472634166,0.663475559587348,2.06883333267483,0.87754158861589,0,0,0.307801034015188,0.227884111694002,0,0,0,1.5950057986596,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.677942222341597,0,0,1.26621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0,0.429226048136571,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0.482259445395058,0,0,0,0,1.21499113316049,0,0,0.472091293214983,0,0.179287339332845,0,0,0,0,2.17199840701485,0.864221491201268,1.63293680054705,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0.213574825135389,4.40172054279065,0,0.496166021811951,0,0,0,0,0,0,0,0,1.77213635993397,0.732157589411779,0.625954653532499,0,0.221858103073705,0.372578417648301,0,0.124980407962107,0,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,1.10961172300523,1.7046270474758,1.50940741051545,0,0,0.302461847526478,0.621748802331122,1.47855149989634,0,0,0.776314784381297,0.829412415681711,0.265841714557995,1.04349012362347,0.150257608997218,1.52322084867518,0.813741466409323,0.545545977607678,0.214821114084977,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0,0,0.438568099157414,0.353378291891762,0.38582807654183,0.844712203265363,0,0,0.607719912354764,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0.314531883711793,0,0.169732529954025,0,0,0,0.636008701306837,0,0,0,0,1.02766760154335,0,0.319267718114302,1.43581454968528,0.504143392443436,0.760729777106397,0.807378228159255,0,0,0,0,0.231051332300676,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,1.48582686160468,0,0.826747186004736,1.20490039368423,0.546974809018219,0,0.496211178389294,0,0,0,0,0,1.36597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| ||
|short_description=p4@BMPER | |||
}} | }} |
Latest revision as of 08:35, 18 September 2015
Short description: | p4@BMPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BMPER_5end |
Coexpression cluster: | C4684_Smooth_lung_Fibroblast_mesenchymal_Chondrocyte_basal_mesodermal |
Association with transcript: | 18bp_to_ENST00000444773_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | F8WDG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.46e-17 | 32 |
smooth muscle cell | 1.47e-13 | 43 |
smooth muscle myoblast | 1.47e-13 | 43 |
smooth muscle cell of the subclavian artery | 3.64e-13 | 5 |
skin fibroblast | 2.10e-11 | 23 |
muscle precursor cell | 4.25e-10 | 58 |
myoblast | 4.25e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.25e-10 | 58 |
muscle cell | 1.18e-09 | 55 |
fibroblast | 1.21e-09 | 76 |
electrically responsive cell | 2.69e-08 | 61 |
electrically active cell | 2.69e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.84e-09 | 5 |
myotonic disease | 7.84e-09 | 5 |
muscle tissue disease | 7.84e-09 | 5 |
myopathy | 7.84e-09 | 5 |
muscular disease | 7.84e-09 | 5 |
myotonic dystrophy | 7.84e-09 | 5 |